RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 ZC3H6P61129 1189 aaKnown RBP13.94□□□□□ -0.18
GARNL3-211ENST00000460176 SMG6Q86US8 1419 aaKnown RBP13.94□□□□□ -0.18
GARNL3-211ENST00000460176 NRAPQ86VF7 1730 aa13.94□□□□□ -0.18
GARNL3-211ENST00000460176 NWD2Q9ULI1 1742 aa13.94□□□□□ -0.18
GARNL3-211ENST00000460176 ADAMTS2O95450 1211 aa13.93□□□□□ -0.18
GARNL3-211ENST00000460176 TNNT2P45379 298 aaPredicted RBP13.93□□□□□ -0.18
GARNL3-211ENST00000460176 ARHGEF25Q86VW2 580 aa13.93□□□□□ -0.18
GARNL3-211ENST00000460176 MAP3K19Q56UN5 1328 aa13.92□□□□□ -0.18
GARNL3-211ENST00000460176 RRS1Q15050 365 aaKnown RBP13.91□□□□□ -0.18
GARNL3-211ENST00000460176 POLKQ9UBT6 870 aa13.91□□□□□ -0.18
GARNL3-211ENST00000460176 CAMTA1Q9Y6Y1 1673 aa13.91□□□□□ -0.18
GARNL3-211ENST00000460176 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.9□□□□□ -0.18
GARNL3-211ENST00000460176 FAM83GA6ND36 823 aa13.9□□□□□ -0.18
GARNL3-211ENST00000460176 RALBP1Q15311 655 aa13.9□□□□□ -0.18
GARNL3-211ENST00000460176 CHRNA2Q15822 529 aa13.9□□□□□ -0.18
GARNL3-211ENST00000460176 PRKRIP1Q9H875 184 aaPredicted RBP13.9□□□□□ -0.18
GARNL3-211ENST00000460176 PRDM11Q9NQV5 511 aa13.9□□□□□ -0.18
GARNL3-211ENST00000460176 EMILIN1Q9Y6C2 1016 aa13.9□□□□□ -0.18
GARNL3-211ENST00000460176 RTL1A6NKG5 1358 aa13.9□□□□□ -0.18
GARNL3-211ENST00000460176 KIF24Q5T7B8 1368 aa13.9□□□□□ -0.18
GARNL3-211ENST00000460176 CDK12Q9NYV4 1490 aaPredicted RBP13.9□□□□□ -0.18
GARNL3-211ENST00000460176 SLIT2O94813 1529 aa13.9□□□□□ -0.19
GARNL3-211ENST00000460176 PPP2R1AP30153 589 aa13.89□□□□□ -0.19
GARNL3-211ENST00000460176 RNF39Q9H2S5 420 aa13.89□□□□□ -0.19
GARNL3-211ENST00000460176 FAM208AQ9UK61 1670 aaKnown RBP13.88□□□□□ -0.19
GARNL3-211ENST00000460176 FLT4P35916 1363 aa13.88□□□□□ -0.19
GARNL3-211ENST00000460176 ZBTB7CA1YPR0 619 aa13.88□□□□□ -0.19
GARNL3-211ENST00000460176 DIEXFQ68CQ4 756 aaKnown RBP13.88□□□□□ -0.19
GARNL3-211ENST00000460176 BLMP54132 1417 aaPredicted RBP13.88□□□□□ -0.19
GARNL3-211ENST00000460176 COL5A2P05997 1499 aaPredicted RBP13.87□□□□□ -0.19
GARNL3-211ENST00000460176 RGPD2P0DJD1 1756 aa13.87□□□□□ -0.19
GARNL3-211ENST00000460176 HOXC9P31274 260 aa13.87□□□□□ -0.19
GARNL3-211ENST00000460176 MEX3CQ5U5Q3 659 aaKnown RBP13.87□□□□□ -0.19
GARNL3-211ENST00000460176 IP6K1Q92551 441 aa13.87□□□□□ -0.19
GARNL3-211ENST00000460176 C8orf37Q96NL8 207 aa13.87□□□□□ -0.19
GARNL3-211ENST00000460176 AXIN2Q9Y2T1 843 aa13.87□□□□□ -0.19
GARNL3-211ENST00000460176 MYBBP1AQ9BQG0 1328 aaKnown RBP13.87□□□□□ -0.19
GARNL3-211ENST00000460176 COL3A1P02461 1466 aaPredicted RBP13.87□□□□□ -0.19
GARNL3-211ENST00000460176 INSRP06213 1382 aa13.86□□□□□ -0.19
GARNL3-211ENST00000460176 ANP32CO43423 234 aa13.86□□□□□ -0.19
GARNL3-211ENST00000460176 AMPHP49418 695 aa13.86□□□□□ -0.19
GARNL3-211ENST00000460176 MTHFSP49914 203 aa13.86□□□□□ -0.19
GARNL3-211ENST00000460176 BCL9LQ86UU0 1499 aa13.86□□□□□ -0.19
GARNL3-211ENST00000460176 FNBP4Q8N3X1 1017 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-211ENST00000460176 BTG4Q9NY30 223 aa13.85□□□□□ -0.19
GARNL3-211ENST00000460176 RGPD1P0DJD0 1748 aa13.84□□□□□ -0.19
GARNL3-211ENST00000460176 PPM1GO15355 546 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-211ENST00000460176 HSP90AB2PQ58FF8 381 aa13.84□□□□□ -0.19
GARNL3-211ENST00000460176 NGLY1Q96IV0 654 aa13.84□□□□□ -0.19
GARNL3-211ENST00000460176 AFF2P51816 1311 aa13.84□□□□□ -0.19
GARNL3-211ENST00000460176 WNK3Q9BYP7 1800 aa13.83□□□□□ -0.2
GARNL3-211ENST00000460176 ERBB3P21860 1342 aa13.82□□□□□ -0.2
GARNL3-211ENST00000460176 ANKRD24Q8TF21 1146 aa13.81□□□□□ -0.2
GARNL3-211ENST00000460176 WDR17Q8IZU2 1322 aa13.81□□□□□ -0.2
GARNL3-211ENST00000460176 EIF4A2Q14240 407 aaKnown RBP13.8□□□□□ -0.2
GARNL3-211ENST00000460176 UNC5CLQ8IV45 518 aa13.8□□□□□ -0.2
GARNL3-211ENST00000460176 LTV1Q96GA3 475 aaPredicted RBP13.8□□□□□ -0.2
GARNL3-211ENST00000460176 USP21Q9UK80 565 aa13.8□□□□□ -0.2
GARNL3-211ENST00000460176 ATRNO75882 1429 aa13.8□□□□□ -0.2
GARNL3-211ENST00000460176 LARP1Q6PKG0 1096 aaKnown RBP13.79□□□□□ -0.2
GARNL3-211ENST00000460176 CFAP53Q96M91 514 aa13.79□□□□□ -0.2
GARNL3-211ENST00000460176 STRN4Q9NRL3 753 aa13.79□□□□□ -0.2
GARNL3-211ENST00000460176 CRB1P82279 1406 aa13.79□□□□□ -0.2
GARNL3-211ENST00000460176 NCAPD2Q15021 1401 aa13.79□□□□□ -0.2
GARNL3-211ENST00000460176 GLI3P10071 1580 aa13.79□□□□□ -0.2
GARNL3-211ENST00000460176 IL13P35225 146 aa13.78□□□□□ -0.2
GARNL3-211ENST00000460176 EVA1CP58658 441 aa13.78□□□□□ -0.2
GARNL3-211ENST00000460176 CCDC184Q52MB2 194 aa13.78□□□□□ -0.2
GARNL3-211ENST00000460176 U3KPZ7 1027 aaPredicted RBP13.78□□□□□ -0.2
GARNL3-211ENST00000460176 DIAPH1O60610 1272 aaKnown RBP13.77□□□□□ -0.21
GARNL3-211ENST00000460176 CSB-PGBD3P0DP91 1061 aa13.77□□□□□ -0.21
GARNL3-211ENST00000460176 VPS72Q15906 364 aa13.77□□□□□ -0.21
GARNL3-211ENST00000460176 RGS17Q9UGC6 210 aaPredicted RBP13.77□□□□□ -0.21
GARNL3-211ENST00000460176 SPATA31A5Q5VU36 1347 aa13.76□□□□□ -0.21
GARNL3-211ENST00000460176 SPATA31A7Q8IWB4 1347 aa13.76□□□□□ -0.21
GARNL3-211ENST00000460176 MIER1Q8N108 512 aa13.76□□□□□ -0.21
GARNL3-211ENST00000460176 EYA1Q99502 592 aa13.76□□□□□ -0.21
GARNL3-211ENST00000460176 SPATA31A1Q5TZJ5 1347 aa13.75□□□□□ -0.21
GARNL3-211ENST00000460176 IGSF1Q8N6C5 1336 aa13.75□□□□□ -0.21
GARNL3-211ENST00000460176 C1QBPQ07021 282 aaKnown RBP13.75□□□□□ -0.21
GARNL3-211ENST00000460176 NBPF6Q5VWK0 638 aa13.75□□□□□ -0.21
GARNL3-211ENST00000460176 ZNF772Q68DY9 489 aaPredicted RBP13.75□□□□□ -0.21
GARNL3-211ENST00000460176 TOM1L2Q6ZVM7 507 aa13.75□□□□□ -0.21
GARNL3-211ENST00000460176 NBPF4Q96M43 638 aa13.75□□□□□ -0.21
GARNL3-211ENST00000460176 CARD10Q9BWT7 1032 aa13.75□□□□□ -0.21
GARNL3-211ENST00000460176 TRPC5Q9UL62 973 aaPredicted RBP13.75□□□□□ -0.21
GARNL3-211ENST00000460176 PARP4Q9UKK3 1724 aaKnown RBP13.75□□□□□ -0.21
GARNL3-211ENST00000460176 NLRP2Q9NX02 1062 aa13.74□□□□□ -0.21
GARNL3-211ENST00000460176 THSD7AQ9UPZ6 1657 aa13.74□□□□□ -0.21
GARNL3-211ENST00000460176 USHBP1Q8N6Y0 703 aa13.73□□□□□ -0.21
GARNL3-211ENST00000460176 QTRT2Q9H974 415 aaKnown RBP13.73□□□□□ -0.21
GARNL3-211ENST00000460176 DISP2A7MBM2 1401 aa13.73□□□□□ -0.21
GARNL3-211ENST00000460176 KDRP35968 1356 aa13.72□□□□□ -0.21
GARNL3-211ENST00000460176 LRRC37A3O60309 1634 aa13.72□□□□□ -0.21
GARNL3-211ENST00000460176 CCER2I3L3R5 266 aa13.72□□□□□ -0.21
GARNL3-211ENST00000460176 GJD4Q96KN9 370 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-211ENST00000460176 MRS2Q9HD23 443 aa13.72□□□□□ -0.21
GARNL3-211ENST00000460176 RTN4Q9NQC3 1192 aaKnown RBP13.72□□□□□ -0.21
GARNL3-211ENST00000460176 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
GARNL3-211ENST00000460176 PKD1L3Q7Z443 1732 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms