RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 CALD1Q05682 793 aaKnown RBP7.75□□□□□ -1.17
UBQLN4-202ENST00000459954 L1TD1Q5T7N2 865 aaKnown RBP7.75□□□□□ -1.17
UBQLN4-202ENST00000459954 ATF7IPQ6VMQ6 1270 aa7.75□□□□□ -1.17
UBQLN4-202ENST00000459954 ARHGAP45Q92619 1136 aa7.75□□□□□ -1.17
UBQLN4-202ENST00000459954 TRIM35Q9UPQ4 493 aa7.75□□□□□ -1.17
UBQLN4-202ENST00000459954 NWD1Q149M9 1564 aa7.75□□□□□ -1.17
UBQLN4-202ENST00000459954 METP08581 1390 aa7.74□□□□□ -1.17
UBQLN4-202ENST00000459954 KIF24Q5T7B8 1368 aa7.74□□□□□ -1.17
UBQLN4-202ENST00000459954 FYB1O15117 783 aa7.74□□□□□ -1.17
UBQLN4-202ENST00000459954 SEC24BO95487 1268 aa7.74□□□□□ -1.17
UBQLN4-202ENST00000459954 NEUROD2Q15784 382 aa7.74□□□□□ -1.17
UBQLN4-202ENST00000459954 NUTM2DQ5VT03 806 aaPredicted RBP7.74□□□□□ -1.17
UBQLN4-202ENST00000459954 HDGFL2Q7Z4V5 671 aaPredicted RBP7.74□□□□□ -1.17
UBQLN4-202ENST00000459954 FTSJ3Q8IY81 847 aaKnown RBP7.74□□□□□ -1.17
UBQLN4-202ENST00000459954 CFAP44Q96MT7 982 aa7.74□□□□□ -1.17
UBQLN4-202ENST00000459954 ISY1Q9ULR0 285 aaKnown RBP7.74□□□□□ -1.17
UBQLN4-202ENST00000459954 RRP7AQ9Y3A4 280 aaKnown RBP7.74□□□□□ -1.17
UBQLN4-202ENST00000459954 LRRC7Q96NW7 1537 aa7.73□□□□□ -1.17
UBQLN4-202ENST00000459954 TMEM94Q12767 1356 aa7.73□□□□□ -1.17
UBQLN4-202ENST00000459954 DIAPH1O60610 1272 aaKnown RBP7.73□□□□□ -1.17
UBQLN4-202ENST00000459954 SNX21Q969T3 373 aa7.73□□□□□ -1.17
UBQLN4-202ENST00000459954 SMC4Q9NTJ3 1288 aa7.73□□□□□ -1.17
UBQLN4-202ENST00000459954 ZBTB40Q9NUA8 1239 aa7.73□□□□□ -1.17
UBQLN4-202ENST00000459954 CHMP5Q9NZZ3 219 aa7.73□□□□□ -1.17
UBQLN4-202ENST00000459954 AATKQ6ZMQ8 1374 aa7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 TRIM27P14373 513 aa7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 PTMSP20962 102 aa7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 TNNT2P45379 298 aaPredicted RBP7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 RBM25P49756 843 aaKnown RBP7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 EXOSC9Q06265 439 aaKnown RBP7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 C14orf37Q86TY3 774 aa7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 FAM43AQ8N2R8 423 aa7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 SSH1Q8WYL5 1049 aa7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 GCC1Q96CN9 775 aa7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 TBC1D2Q9BYX2 928 aa7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 CABP2Q9NPB3 220 aa7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 SLAIN2Q9P270 581 aa7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 CHD2O14647 1828 aaKnown RBP7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 CDK12Q9NYV4 1490 aaPredicted RBP7.72□□□□□ -1.17
UBQLN4-202ENST00000459954 NRKQ7Z2Y5 1582 aa7.71□□□□□ -1.17
UBQLN4-202ENST00000459954 EDC4Q6P2E9 1401 aaKnown RBP7.71□□□□□ -1.17
UBQLN4-202ENST00000459954 UBAP1LF5GYI3 381 aa7.71□□□□□ -1.18
UBQLN4-202ENST00000459954 RIPK4P57078 832 aa7.71□□□□□ -1.18
UBQLN4-202ENST00000459954 SRPK2P78362 688 aaKnown RBP7.71□□□□□ -1.18
UBQLN4-202ENST00000459954 NUCB1Q02818 461 aa7.71□□□□□ -1.18
UBQLN4-202ENST00000459954 IL27Q8NEV9 243 aa7.71□□□□□ -1.18
UBQLN4-202ENST00000459954 C22orf23Q9BZE7 217 aa7.71□□□□□ -1.18
UBQLN4-202ENST00000459954 POGKQ9P215 609 aa7.71□□□□□ -1.18
UBQLN4-202ENST00000459954 CIZ1Q9ULV3 898 aaPredicted RBP7.71□□□□□ -1.18
UBQLN4-202ENST00000459954 NRXN3Q9Y4C0 1643 aa7.7□□□□□ -1.18
UBQLN4-202ENST00000459954 CPSF1Q10570 1443 aaKnown RBP7.7□□□□□ -1.18
UBQLN4-202ENST00000459954 HAP1P54257 671 aaPredicted RBP7.7□□□□□ -1.18
UBQLN4-202ENST00000459954 LMOD3Q0VAK6 560 aa7.7□□□□□ -1.18
UBQLN4-202ENST00000459954 BMP2KLQ5H9B9 411 aa7.7□□□□□ -1.18
UBQLN4-202ENST00000459954 ARXQ96QS3 562 aa7.7□□□□□ -1.18
UBQLN4-202ENST00000459954 NOB1Q9ULX3 412 aaKnown RBP7.7□□□□□ -1.18
UBQLN4-202ENST00000459954 TNNQ9UQP3 1299 aa7.7□□□□□ -1.18
UBQLN4-202ENST00000459954 PTPRUQ92729 1446 aa7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 ADGRL3Q9HAR2 1447 aa7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 NALCNQ8IZF0 1738 aa7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 U2SURPO15042 1029 aaKnown RBP7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 ZNF853P0CG23 659 aa7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 MCM4P33991 863 aa7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 GNAI1P63096 354 aa7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 NFE2L2Q16236 605 aa7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 PRAM1Q96QH2 718 aa7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 CDK19Q9BWU1 502 aa7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 BCL2L13Q9BXK5 485 aa7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 RSPH6AQ9H0K4 717 aa7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 GGNBP2Q9H3C7 697 aa7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 IFT57Q9NWB7 429 aa7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 N4BP2Q86UW6 1770 aaPredicted RBP7.69□□□□□ -1.18
UBQLN4-202ENST00000459954 TOPAZ1Q8N9V7 1692 aa7.68□□□□□ -1.18
UBQLN4-202ENST00000459954 FSD2A1L4K1 749 aa7.68□□□□□ -1.18
UBQLN4-202ENST00000459954 DDIT3P35638 169 aa7.68□□□□□ -1.18
UBQLN4-202ENST00000459954 ITPRIPQ8IWB1 547 aa7.68□□□□□ -1.18
UBQLN4-202ENST00000459954 TMEM57Q8N5G2 664 aa7.68□□□□□ -1.18
UBQLN4-202ENST00000459954 TSR2Q969E8 191 aaKnown RBP7.68□□□□□ -1.18
UBQLN4-202ENST00000459954 STK26Q9P289 416 aa7.68□□□□□ -1.18
UBQLN4-202ENST00000459954 XRN1Q8IZH2 1706 aaKnown RBP7.68□□□□□ -1.18
UBQLN4-202ENST00000459954 ROBO2Q9HCK4 1378 aa7.68□□□□□ -1.18
UBQLN4-202ENST00000459954 RGPD1P0DJD0 1748 aa7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 FMN2Q9NZ56 1722 aa7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 TUBGCP6Q96RT7 1819 aa7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 DDX11L8A8MPP1 907 aa7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 ZBTB7BO15156 539 aaPredicted RBP7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 VAMP4O75379 141 aa7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 CHD1LQ86WJ1 897 aa7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 HSCBQ8IWL3 235 aa7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 MRPL50Q8N5N7 158 aaKnown RBP7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 API5Q9BZZ5 524 aaKnown RBP7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 POLKQ9UBT6 870 aa7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 BRPF3Q9ULD4 1205 aa7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 ABCC4O15439 1325 aa7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 MINK1Q8N4C8 1332 aaPredicted RBP7.67□□□□□ -1.18
UBQLN4-202ENST00000459954 SKOR2Q2VWA4 1001 aaPredicted RBP7.66□□□□□ -1.18
UBQLN4-202ENST00000459954 CLEC17AQ6ZS10 378 aa7.66□□□□□ -1.18
UBQLN4-202ENST00000459954 ZNF692Q9BU19 519 aaPredicted RBP7.66□□□□□ -1.18
UBQLN4-202ENST00000459954 ANKARQ7Z5J8 1434 aa7.66□□□□□ -1.18
UBQLN4-202ENST00000459954 WASLO00401 505 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms