RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PIP4K2BP78356 416 aa7.62□□□□□ -1.19
RNU1-88P-201ENST00000459274 ZRANB1Q9UGI0 708 aa7.62□□□□□ -1.19
RNU1-88P-201ENST00000459274 RTL1A6NKG5 1358 aa7.61□□□□□ -1.19
RNU1-88P-201ENST00000459274 PIK3C2AO00443 1686 aa7.61□□□□□ -1.19
RNU1-88P-201ENST00000459274 SPATA31A3Q5VYP0 1347 aa7.61□□□□□ -1.19
RNU1-88P-201ENST00000459274 NCBP3Q53F19 620 aaKnown RBP7.61□□□□□ -1.19
RNU1-88P-201ENST00000459274 TCP11L2Q8N4U5 519 aa7.61□□□□□ -1.19
RNU1-88P-201ENST00000459274 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.61□□□□□ -1.19
RNU1-88P-201ENST00000459274 IP6K1Q92551 441 aa7.61□□□□□ -1.19
RNU1-88P-201ENST00000459274 LTV1Q96GA3 475 aaPredicted RBP7.61□□□□□ -1.19
RNU1-88P-201ENST00000459274 MYH16Q9H6N6 1097 aa7.61□□□□□ -1.19
RNU1-88P-201ENST00000459274 OVOS2A0A0J9YW53 1432 aa7.61□□□□□ -1.19
RNU1-88P-201ENST00000459274 TNS3Q68CZ2 1445 aa7.61□□□□□ -1.19
RNU1-88P-201ENST00000459274 OVOS2Q6IE36 1432 aa7.61□□□□□ -1.19
RNU1-88P-201ENST00000459274 SSH2Q76I76 1423 aa7.61□□□□□ -1.19
RNU1-88P-201ENST00000459274 MAP3K19Q56UN5 1328 aa7.6□□□□□ -1.19
RNU1-88P-201ENST00000459274 HMOX1P09601 288 aa7.6□□□□□ -1.19
RNU1-88P-201ENST00000459274 HOXC9P31274 260 aa7.6□□□□□ -1.19
RNU1-88P-201ENST00000459274 PRKAR2BP31323 418 aa7.6□□□□□ -1.19
RNU1-88P-201ENST00000459274 RIPK4P57078 832 aa7.6□□□□□ -1.19
RNU1-88P-201ENST00000459274 ZC3H6P61129 1189 aaKnown RBP7.6□□□□□ -1.19
RNU1-88P-201ENST00000459274 PELP1Q8IZL8 1130 aaKnown RBP7.6□□□□□ -1.19
RNU1-88P-201ENST00000459274 PRDM11Q9NQV5 511 aa7.6□□□□□ -1.19
RNU1-88P-201ENST00000459274 USP54Q70EL1 1684 aa7.6□□□□□ -1.19
RNU1-88P-201ENST00000459274 E9PSI1 815 aa7.59□□□□□ -1.19
RNU1-88P-201ENST00000459274 HSP90AB2PQ58FF8 381 aa7.59□□□□□ -1.19
RNU1-88P-201ENST00000459274 C1orf141Q5JVX7 400 aa7.59□□□□□ -1.19
RNU1-88P-201ENST00000459274 SULT6B1Q6IMI4 303 aa7.59□□□□□ -1.19
RNU1-88P-201ENST00000459274 WDR63Q8IWG1 891 aa7.59□□□□□ -1.19
RNU1-88P-201ENST00000459274 GAS2L2Q8NHY3 880 aa7.59□□□□□ -1.19
RNU1-88P-201ENST00000459274 RAPGEF4Q8WZA2 1011 aa7.59□□□□□ -1.19
RNU1-88P-201ENST00000459274 CHMP4AQ9BY43 222 aa7.59□□□□□ -1.19
RNU1-88P-201ENST00000459274 BLMP54132 1417 aaPredicted RBP7.59□□□□□ -1.19
RNU1-88P-201ENST00000459274 PNPLA6Q8IY17 1366 aa7.59□□□□□ -1.2
RNU1-88P-201ENST00000459274 PHLPP1O60346 1717 aa7.58□□□□□ -1.2
RNU1-88P-201ENST00000459274 TRPM3Q9HCF6 1732 aaPredicted RBP7.58□□□□□ -1.2
RNU1-88P-201ENST00000459274 SOS2Q07890 1332 aaPredicted RBP7.58□□□□□ -1.2
RNU1-88P-201ENST00000459274 ROBO1Q9Y6N7 1651 aa7.58□□□□□ -1.2
RNU1-88P-201ENST00000459274 IQSEC2Q5JU85 1478 aa7.58□□□□□ -1.2
RNU1-88P-201ENST00000459274 FBLN1P23142 703 aa7.58□□□□□ -1.2
RNU1-88P-201ENST00000459274 IL13P35225 146 aa7.58□□□□□ -1.2
RNU1-88P-201ENST00000459274 EIF4A2Q14240 407 aaKnown RBP7.58□□□□□ -1.2
RNU1-88P-201ENST00000459274 CCDC27Q2M243 656 aa7.58□□□□□ -1.2
RNU1-88P-201ENST00000459274 PLEKHO1Q53GL0 409 aaPredicted RBP7.58□□□□□ -1.2
RNU1-88P-201ENST00000459274 NLRP2Q9NX02 1062 aa7.58□□□□□ -1.2
RNU1-88P-201ENST00000459274 SHPRHQ149N8 1683 aa7.57□□□□□ -1.2
RNU1-88P-201ENST00000459274 ALS2Q96Q42 1657 aa7.57□□□□□ -1.2
RNU1-88P-201ENST00000459274 CANXP27824 592 aaKnown RBP7.57□□□□□ -1.2
RNU1-88P-201ENST00000459274 TMPOP42166 694 aaKnown RBP7.57□□□□□ -1.2
RNU1-88P-201ENST00000459274 AMOTQ4VCS5 1084 aa7.57□□□□□ -1.2
RNU1-88P-201ENST00000459274 ARHGEF25Q86VW2 580 aa7.57□□□□□ -1.2
RNU1-88P-201ENST00000459274 CERKQ8TCT0 537 aa7.57□□□□□ -1.2
RNU1-88P-201ENST00000459274 DDX17Q92841 729 aaKnown RBP7.57□□□□□ -1.2
RNU1-88P-201ENST00000459274 LAS1LQ9Y4W2 734 aaKnown RBP7.57□□□□□ -1.2
RNU1-88P-201ENST00000459274 USP19O94966 1318 aa7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 TATP17735 454 aaPredicted RBP7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 HOXD11P31277 338 aaPredicted RBP7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 GNAI1P63096 354 aa7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 NFE2L2Q16236 605 aa7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 POTEGQ6S5H5 508 aa7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 TOM1L2Q6ZVM7 507 aa7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 WWC1Q8IX03 1113 aa7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 ANKRD24Q8TF21 1146 aa7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 SPG7Q9UQ90 795 aa7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 RRP7AQ9Y3A4 280 aaKnown RBP7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 FAM208AQ9UK61 1670 aaKnown RBP7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 NHSL1Q5SYE7 1610 aa7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 LTBP4Q8N2S1 1624 aa7.56□□□□□ -1.2
RNU1-88P-201ENST00000459274 PXDNQ92626 1479 aa7.55□□□□□ -1.2
RNU1-88P-201ENST00000459274 SENP3-EIF4A1A0A087X0R7 540 aa7.55□□□□□ -1.2
RNU1-88P-201ENST00000459274 HTATSF1O43719 755 aaKnown RBP7.55□□□□□ -1.2
RNU1-88P-201ENST00000459274 MS4A1P11836 297 aa7.55□□□□□ -1.2
RNU1-88P-201ENST00000459274 MEX3CQ5U5Q3 659 aaKnown RBP7.55□□□□□ -1.2
RNU1-88P-201ENST00000459274 CABLES1Q8TDN4 633 aa7.55□□□□□ -1.2
RNU1-88P-201ENST00000459274 RSPH6AQ9H0K4 717 aa7.55□□□□□ -1.2
RNU1-88P-201ENST00000459274 RGPD5Q99666 1765 aa7.55□□□□□ -1.2
RNU1-88P-201ENST00000459274 IL16Q14005 1332 aa7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 SLIT3O75094 1523 aa7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 PHRF1Q9P1Y6 1649 aaKnown RBP7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 NUTM2BA6NNL0 878 aaPredicted RBP7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 GNAT3A8MTJ3 354 aa7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 NUTM2EB1AL46 878 aaPredicted RBP7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 HSP90AB1P08238 724 aaKnown RBP7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 CT47B1P0C2W7 299 aaPredicted RBP7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 NUTM2AQ8IVF1 878 aaPredicted RBP7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 EYA1Q99502 592 aa7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 STRN4Q9NRL3 753 aa7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 RCAN3Q9UKA8 241 aa7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 CCDC9Q9Y3X0 531 aaKnown RBP7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 SUPT16HQ9Y5B9 1047 aaKnown RBP7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 KAT6BQ8WYB5 2073 aa7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 DLG5Q8TDM6 1919 aa7.54□□□□□ -1.2
RNU1-88P-201ENST00000459274 IGSF1Q8N6C5 1336 aa7.53□□□□□ -1.2
RNU1-88P-201ENST00000459274 ABCC6O95255 1503 aa7.53□□□□□ -1.2
RNU1-88P-201ENST00000459274 TEFQ10587 303 aa7.53□□□□□ -1.2
RNU1-88P-201ENST00000459274 CHRNA2Q15822 529 aa7.53□□□□□ -1.2
RNU1-88P-201ENST00000459274 PLEKHF1Q96S99 279 aa7.53□□□□□ -1.2
RNU1-88P-201ENST00000459274 GTF3C3Q9Y5Q9 886 aa7.53□□□□□ -1.2
RNU1-88P-201ENST00000459274 CPDO75976 1380 aa7.53□□□□□ -1.2
RNU1-88P-201ENST00000459274 AHDC1Q5TGY3 1603 aaPredicted RBP7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms