RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 PURBQ96QR8 312 aaKnown RBP6.39□□□□□ -1.39
HMGB3P30-201ENST00000457863 ZFAND3Q9H8U3 227 aa6.39□□□□□ -1.39
HMGB3P30-201ENST00000457863 MAGEB6P1A0A0J9YX57 407 aa6.38□□□□□ -1.39
HMGB3P30-201ENST00000457863 H3BM21 787 aa6.38□□□□□ -1.39
HMGB3P30-201ENST00000457863 BRPF1P55201 1214 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P30-201ENST00000457863 FBXO31Q5XUX0 539 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P30-201ENST00000457863 PDXDC2PQ6P474 469 aa6.38□□□□□ -1.39
HMGB3P30-201ENST00000457863 LRRN4Q8WUT4 740 aa6.38□□□□□ -1.39
HMGB3P30-201ENST00000457863 STK17AQ9UEE5 414 aa6.38□□□□□ -1.39
HMGB3P30-201ENST00000457863 FKBPLQ9UIM3 349 aa6.38□□□□□ -1.39
HMGB3P30-201ENST00000457863 VASH1Q7L8A9 365 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P30-201ENST00000457863 CDV3Q9UKY7 258 aaKnown RBP6.37□□□□□ -1.39
HMGB3P30-201ENST00000457863 CCDC116Q8IYX3 515 aa6.36□□□□□ -1.39
HMGB3P30-201ENST00000457863 LINC00528Q8N1L1 170 aa6.36□□□□□ -1.39
HMGB3P30-201ENST00000457863 PROCA1Q8NCQ7 364 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P30-201ENST00000457863 IRF7Q92985 503 aa6.36□□□□□ -1.39
HMGB3P30-201ENST00000457863 CARD14Q9BXL6 1004 aa6.36□□□□□ -1.39
HMGB3P30-201ENST00000457863 EMILIN1Q9Y6C2 1016 aa6.36□□□□□ -1.39
HMGB3P30-201ENST00000457863 VSIG8P0DPA2 414 aa6.35□□□□□ -1.39
HMGB3P30-201ENST00000457863 SLC10A4Q96EP9 437 aa6.35□□□□□ -1.39
HMGB3P30-201ENST00000457863 ARHGAP9Q9BRR9 750 aa6.35□□□□□ -1.39
HMGB3P30-201ENST00000457863 GOPCQ9HD26 462 aa6.35□□□□□ -1.39
HMGB3P30-201ENST00000457863 GPSM3Q9Y4H4 160 aa6.35□□□□□ -1.39
HMGB3P30-201ENST00000457863 UPP2O95045 317 aa6.34□□□□□ -1.39
HMGB3P30-201ENST00000457863 NR6A1Q15406 480 aa6.34□□□□□ -1.39
HMGB3P30-201ENST00000457863 ZMYND15Q9H091 742 aa6.34□□□□□ -1.39
HMGB3P30-201ENST00000457863 ZBTB7CA1YPR0 619 aa6.33□□□□□ -1.4
HMGB3P30-201ENST00000457863 USP17L8P0C7I0 530 aa6.33□□□□□ -1.4
HMGB3P30-201ENST00000457863 OCSTAMPQ9BR26 566 aa6.33□□□□□ -1.4
HMGB3P30-201ENST00000457863 TSEN34Q9BSV6 310 aaKnown RBP6.33□□□□□ -1.4
HMGB3P30-201ENST00000457863 SOS2Q07890 1332 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P30-201ENST00000457863 ERBB4Q15303 1308 aa6.32□□□□□ -1.4
HMGB3P30-201ENST00000457863 MAN1A2O60476 641 aa6.32□□□□□ -1.4
HMGB3P30-201ENST00000457863 AP1G2O75843 785 aa6.32□□□□□ -1.4
HMGB3P30-201ENST00000457863 BMP2P12643 396 aa6.32□□□□□ -1.4
HMGB3P30-201ENST00000457863 GMPRP36959 345 aa6.32□□□□□ -1.4
HMGB3P30-201ENST00000457863 PTK2Q05397 1052 aa6.32□□□□□ -1.4
HMGB3P30-201ENST00000457863 C6orf118Q5T5N4 469 aa6.32□□□□□ -1.4
HMGB3P30-201ENST00000457863 PPP1R26Q5T8A7 1209 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P30-201ENST00000457863 Q6ZVU0 165 aa6.32□□□□□ -1.4
HMGB3P30-201ENST00000457863 PNMA1Q8ND90 353 aa6.32□□□□□ -1.4
HMGB3P30-201ENST00000457863 PGPEP1Q9NXJ5 209 aa6.32□□□□□ -1.4
HMGB3P30-201ENST00000457863 SOBPA7XYQ1 873 aa6.31□□□□□ -1.4
HMGB3P30-201ENST00000457863 RFC5P40937 340 aa6.31□□□□□ -1.4
HMGB3P30-201ENST00000457863 VEGFBP49765 207 aa6.31□□□□□ -1.4
HMGB3P30-201ENST00000457863 DHX9Q08211 1270 aaKnown RBP6.31□□□□□ -1.4
HMGB3P30-201ENST00000457863 INTS6LQ5JSJ4 861 aaKnown RBP6.31□□□□□ -1.4
HMGB3P30-201ENST00000457863 ZBTB33Q86T24 672 aa6.31□□□□□ -1.4
HMGB3P30-201ENST00000457863 KCTD15Q96SI1 283 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P30-201ENST00000457863 HMX1Q9NP08 348 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P30-201ENST00000457863 LORP23490 312 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P30-201ENST00000457863 NBPF20Q3BBV1 942 aa6.3□□□□□ -1.4
HMGB3P30-201ENST00000457863 ADAM32Q8TC27 787 aa6.3□□□□□ -1.4
HMGB3P30-201ENST00000457863 DNMT3LQ9UJW3 386 aa6.3□□□□□ -1.4
HMGB3P30-201ENST00000457863 SPINT1O43278 529 aa6.29□□□□□ -1.4
HMGB3P30-201ENST00000457863 EPS8L1Q8TE68 723 aa6.29□□□□□ -1.4
HMGB3P30-201ENST00000457863 HMGB1P09429 215 aaKnown RBP6.28□□□□□ -1.4
HMGB3P30-201ENST00000457863 TRIM34Q9BYJ4 488 aa6.28□□□□□ -1.4
HMGB3P30-201ENST00000457863 ATP1B4Q9UN42 357 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P30-201ENST00000457863 FAM181BA6NEQ2 426 aa6.27□□□□□ -1.41
HMGB3P30-201ENST00000457863 TTLL8A6PVC2 850 aa6.27□□□□□ -1.41
HMGB3P30-201ENST00000457863 PPFIA3O75145 1194 aa6.27□□□□□ -1.41
HMGB3P30-201ENST00000457863 CBLBQ13191 982 aa6.27□□□□□ -1.41
HMGB3P30-201ENST00000457863 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.27□□□□□ -1.41
HMGB3P30-201ENST00000457863 TMEM259Q4ZIN3 620 aa6.27□□□□□ -1.41
HMGB3P30-201ENST00000457863 ZSCAN1Q8NBB4 408 aa6.27□□□□□ -1.41
HMGB3P30-201ENST00000457863 PCMTD1Q96MG8 357 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P30-201ENST00000457863 ESPNB1AK53 854 aa6.26□□□□□ -1.41
HMGB3P30-201ENST00000457863 SOCS7O14512 581 aa6.26□□□□□ -1.41
HMGB3P30-201ENST00000457863 PDIA4P13667 645 aaKnown RBP6.26□□□□□ -1.41
HMGB3P30-201ENST00000457863 IGSF3O75054 1194 aa6.25□□□□□ -1.41
HMGB3P30-201ENST00000457863 NEUROD2Q15784 382 aa6.25□□□□□ -1.41
HMGB3P30-201ENST00000457863 SEPT12Q8IYM1 358 aa6.25□□□□□ -1.41
HMGB3P30-201ENST00000457863 ARID3AQ99856 593 aa6.25□□□□□ -1.41
HMGB3P30-201ENST00000457863 DZIP3Q86Y13 1208 aaKnown RBP6.24□□□□□ -1.41
HMGB3P30-201ENST00000457863 GJD4Q96KN9 370 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P30-201ENST00000457863 ADH1AP07327 375 aa6.23□□□□□ -1.41
HMGB3P30-201ENST00000457863 PTSQ03393 145 aa6.23□□□□□ -1.41
HMGB3P30-201ENST00000457863 ZNF784Q8NCA9 323 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P30-201ENST00000457863 ERVH48-1M5A8F1 160 aa6.22□□□□□ -1.41
HMGB3P30-201ENST00000457863 LILRA1O75019 489 aa6.22□□□□□ -1.41
HMGB3P30-201ENST00000457863 CDK11BP21127 795 aaKnown RBP6.22□□□□□ -1.41
HMGB3P30-201ENST00000457863 NANOS1Q8WY41 292 aaKnown RBP6.22□□□□□ -1.41
HMGB3P30-201ENST00000457863 C1orf115Q9H7X2 142 aa6.22□□□□□ -1.41
HMGB3P30-201ENST00000457863 CDK11AQ9UQ88 783 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P30-201ENST00000457863 ZBBXA8MT70 800 aa6.21□□□□□ -1.42
HMGB3P30-201ENST00000457863 HSP90B1P14625 803 aaKnown RBP6.21□□□□□ -1.42
HMGB3P30-201ENST00000457863 CCDC125Q86Z20 511 aa6.21□□□□□ -1.42
HMGB3P30-201ENST00000457863 TRIM52Q96A61 297 aa6.21□□□□□ -1.42
HMGB3P30-201ENST00000457863 AGBL1Q96MI9 1066 aa6.21□□□□□ -1.42
HMGB3P30-201ENST00000457863 TMPRSS4Q9NRS4 437 aa6.21□□□□□ -1.42
HMGB3P30-201ENST00000457863 SLC35F4A4IF30 521 aa6.2□□□□□ -1.42
HMGB3P30-201ENST00000457863 FBXO45P0C2W1 286 aa6.2□□□□□ -1.42
HMGB3P30-201ENST00000457863 CTSOP43234 321 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P30-201ENST00000457863 RELBQ01201 579 aa6.2□□□□□ -1.42
HMGB3P30-201ENST00000457863 KDF1Q8NAX2 398 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P30-201ENST00000457863 BANK1Q8NDB2 785 aa6.2□□□□□ -1.42
HMGB3P30-201ENST00000457863 RNF217Q8TC41 542 aa6.2□□□□□ -1.42
HMGB3P30-201ENST00000457863 INSM2Q96T92 566 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P30-201ENST00000457863 GPR37L1O60883 481 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms