RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 PHLPP1O60346 1717 aa12.5□□□□□ -0.41
THBS3-203ENST00000457183 PKNOX2Q96KN3 472 aa12.5□□□□□ -0.41
THBS3-203ENST00000457183 MST1RQ04912 1400 aa12.5□□□□□ -0.41
THBS3-203ENST00000457183 RSPH6AQ9H0K4 717 aa12.49□□□□□ -0.41
THBS3-203ENST00000457183 PDE3AQ14432 1141 aa12.49□□□□□ -0.41
THBS3-203ENST00000457183 MAPK8IP3Q9UPT6 1336 aa12.49□□□□□ -0.41
THBS3-203ENST00000457183 BRINP3Q76B58 766 aa12.48□□□□□ -0.41
THBS3-203ENST00000457183 CLUAP1Q96AJ1 413 aa12.48□□□□□ -0.41
THBS3-203ENST00000457183 BECN1Q14457 450 aa12.48□□□□□ -0.41
THBS3-203ENST00000457183 SLKQ9H2G2 1235 aaPredicted RBP12.48□□□□□ -0.41
THBS3-203ENST00000457183 ACEP12821 1306 aa12.48□□□□□ -0.41
THBS3-203ENST00000457183 MORC1Q86VD1 984 aa12.47□□□□□ -0.41
THBS3-203ENST00000457183 PANK1Q8TE04 598 aa12.47□□□□□ -0.41
THBS3-203ENST00000457183 COG6Q9Y2V7 657 aa12.47□□□□□ -0.41
THBS3-203ENST00000457183 USP6P35125 1406 aa12.47□□□□□ -0.41
THBS3-203ENST00000457183 KIF1AQ12756 1690 aa12.47□□□□□ -0.41
THBS3-203ENST00000457183 NUTM2FA1L443 756 aa12.46□□□□□ -0.41
THBS3-203ENST00000457183 FYB1O15117 783 aa12.46□□□□□ -0.41
THBS3-203ENST00000457183 SSH2Q76I76 1423 aa12.46□□□□□ -0.41
THBS3-203ENST00000457183 MED1Q15648 1581 aaPredicted RBP12.46□□□□□ -0.41
THBS3-203ENST00000457183 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.41
THBS3-203ENST00000457183 C1orf167Q5SNV9 1468 aa12.45□□□□□ -0.42
THBS3-203ENST00000457183 ANTXR1Q9H6X2 564 aa12.45□□□□□ -0.42
THBS3-203ENST00000457183 TTC21AQ8NDW8 1320 aa12.45□□□□□ -0.42
THBS3-203ENST00000457183 AHDC1Q5TGY3 1603 aaPredicted RBP12.45□□□□□ -0.42
THBS3-203ENST00000457183 COL16A1Q07092 1604 aaPredicted RBP12.44□□□□□ -0.42
THBS3-203ENST00000457183 USP54Q70EL1 1684 aa12.44□□□□□ -0.42
THBS3-203ENST00000457183 WWC1Q8IX03 1113 aa12.44□□□□□ -0.42
THBS3-203ENST00000457183 NGEFQ8N5V2 710 aa12.44□□□□□ -0.42
THBS3-203ENST00000457183 NGDNQ8NEJ9 315 aaKnown RBP12.44□□□□□ -0.42
THBS3-203ENST00000457183 DDX17Q92841 729 aaKnown RBP12.44□□□□□ -0.42
THBS3-203ENST00000457183 ORAI2Q96SN7 254 aa12.44□□□□□ -0.42
THBS3-203ENST00000457183 RRAGDQ9NQL2 400 aaPredicted RBP12.44□□□□□ -0.42
THBS3-203ENST00000457183 ESCO1Q5FWF5 840 aa12.43□□□□□ -0.42
THBS3-203ENST00000457183 PHF8Q9UPP1 1060 aa12.43□□□□□ -0.42
THBS3-203ENST00000457183 TTC21BQ7Z4L5 1316 aa12.43□□□□□ -0.42
THBS3-203ENST00000457183 JCADQ9P266 1359 aa12.43□□□□□ -0.42
THBS3-203ENST00000457183 GGNBP2Q9H3C7 697 aa12.42□□□□□ -0.42
THBS3-203ENST00000457183 NHSL1Q5SYE7 1610 aa12.42□□□□□ -0.42
THBS3-203ENST00000457183 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.41□□□□□ -0.42
THBS3-203ENST00000457183 PMFBP1Q8TBY8 1022 aa12.41□□□□□ -0.42
THBS3-203ENST00000457183 TBC1D32Q96NH3 1257 aa12.41□□□□□ -0.42
THBS3-203ENST00000457183 UPF2Q9HAU5 1272 aaKnown RBP12.41□□□□□ -0.42
THBS3-203ENST00000457183 L1TD1Q5T7N2 865 aaKnown RBP12.41□□□□□ -0.42
THBS3-203ENST00000457183 ARXQ96QS3 562 aa12.41□□□□□ -0.42
THBS3-203ENST00000457183 AATKQ6ZMQ8 1374 aa12.4□□□□□ -0.42
THBS3-203ENST00000457183 USP31Q70CQ4 1352 aa12.4□□□□□ -0.42
THBS3-203ENST00000457183 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.42
THBS3-203ENST00000457183 PCDHB15Q9Y5E8 787 aa12.4□□□□□ -0.42
THBS3-203ENST00000457183 COG3Q96JB2 828 aa12.4□□□□□ -0.42
THBS3-203ENST00000457183 OVOS2A0A0J9YW53 1432 aa12.4□□□□□ -0.43
THBS3-203ENST00000457183 OVOS2Q6IE36 1432 aa12.4□□□□□ -0.43
THBS3-203ENST00000457183 RARSP54136 660 aaKnown RBP12.39□□□□□ -0.43
THBS3-203ENST00000457183 PIK3C2AO00443 1686 aa12.39□□□□□ -0.43
THBS3-203ENST00000457183 MAP2P11137 1827 aaKnown RBP12.39□□□□□ -0.43
THBS3-203ENST00000457183 RLBP1P12271 317 aa12.39□□□□□ -0.43
THBS3-203ENST00000457183 NEUROD2Q15784 382 aa12.39□□□□□ -0.43
THBS3-203ENST00000457183 NME9Q86XW9 330 aa12.39□□□□□ -0.43
THBS3-203ENST00000457183 CFAP53Q96M91 514 aa12.39□□□□□ -0.43
THBS3-203ENST00000457183 LRRC59Q96AG4 307 aaKnown RBP12.38□□□□□ -0.43
THBS3-203ENST00000457183 PDZRN3Q9UPQ7 1066 aa12.38□□□□□ -0.43
THBS3-203ENST00000457183 TNNQ9UQP3 1299 aa12.38□□□□□ -0.43
THBS3-203ENST00000457183 FOXO3O43524 673 aa12.38□□□□□ -0.43
THBS3-203ENST00000457183 AAMPQ13685 434 aa12.38□□□□□ -0.43
THBS3-203ENST00000457183 SHPRHQ149N8 1683 aa12.37□□□□□ -0.43
THBS3-203ENST00000457183 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
THBS3-203ENST00000457183 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
THBS3-203ENST00000457183 MTHFSP49914 203 aa12.37□□□□□ -0.43
THBS3-203ENST00000457183 XPCQ01831 940 aaPredicted RBP12.37□□□□□ -0.43
THBS3-203ENST00000457183 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
THBS3-203ENST00000457183 RRP7AQ9Y3A4 280 aaKnown RBP12.37□□□□□ -0.43
THBS3-203ENST00000457183 TRPM3Q9HCF6 1732 aaPredicted RBP12.37□□□□□ -0.43
THBS3-203ENST00000457183 NPHP3Q7Z494 1330 aa12.37□□□□□ -0.43
THBS3-203ENST00000457183 MEX3CQ5U5Q3 659 aaKnown RBP12.37□□□□□ -0.43
THBS3-203ENST00000457183 MARF1Q9Y4F3 1742 aaKnown RBP12.36□□□□□ -0.43
THBS3-203ENST00000457183 SPATA31A6Q5VVP1 1343 aa12.36□□□□□ -0.43
THBS3-203ENST00000457183 TNNT2P45379 298 aaPredicted RBP12.36□□□□□ -0.43
THBS3-203ENST00000457183 PSME1Q06323 249 aa12.36□□□□□ -0.43
THBS3-203ENST00000457183 BCL2L13Q9BXK5 485 aa12.36□□□□□ -0.43
THBS3-203ENST00000457183 PNPLA6Q8IY17 1366 aa12.36□□□□□ -0.43
THBS3-203ENST00000457183 XRCC6P12956 609 aaKnown RBP eCLIP12.36□□□□□ -0.43
THBS3-203ENST00000457183 ILDR2Q71H61 639 aa12.36□□□□□ -0.43
THBS3-203ENST00000457183 SPRYD3Q8NCJ5 442 aa12.36□□□□□ -0.43
THBS3-203ENST00000457183 TCP11L2Q8N4U5 519 aa12.35□□□□□ -0.43
THBS3-203ENST00000457183 SOS2Q07890 1332 aaPredicted RBP12.35□□□□□ -0.43
THBS3-203ENST00000457183 COL3A1P02461 1466 aaPredicted RBP12.34□□□□□ -0.43
THBS3-203ENST00000457183 CDK12Q9NYV4 1490 aaPredicted RBP12.34□□□□□ -0.43
THBS3-203ENST00000457183 GOLGA6L3A6NEY3 463 aa12.34□□□□□ -0.43
THBS3-203ENST00000457183 RWDD1Q9H446 243 aaPredicted RBP12.34□□□□□ -0.43
THBS3-203ENST00000457183 FSD2A1L4K1 749 aa12.34□□□□□ -0.43
THBS3-203ENST00000457183 MCM4P33991 863 aa12.34□□□□□ -0.43
THBS3-203ENST00000457183 RUNDC1Q96C34 613 aa12.34□□□□□ -0.43
THBS3-203ENST00000457183 PANK2Q9BZ23 570 aa12.34□□□□□ -0.43
THBS3-203ENST00000457183 LRP6O75581 1613 aa12.34□□□□□ -0.43
THBS3-203ENST00000457183 GZF1Q9H116 711 aaPredicted RBP12.33□□□□□ -0.44
THBS3-203ENST00000457183 POLKQ9UBT6 870 aa12.33□□□□□ -0.44
THBS3-203ENST00000457183 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
THBS3-203ENST00000457183 ALS2Q96Q42 1657 aa12.33□□□□□ -0.44
THBS3-203ENST00000457183 WDR63Q8IWG1 891 aa12.32□□□□□ -0.44
THBS3-203ENST00000457183 SBNO1A3KN83 1393 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms