RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 A0A1W2PP64 1363 aa17.47■□□□□ 0.39
VEGFA-210ENST00000457104 EDC4Q6P2E9 1401 aaKnown RBP17.47■□□□□ 0.39
VEGFA-210ENST00000457104 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
VEGFA-210ENST00000457104 SOX12O15370 315 aa17.46■□□□□ 0.39
VEGFA-210ENST00000457104 NME9Q86XW9 330 aa17.46■□□□□ 0.39
VEGFA-210ENST00000457104 USP47Q96K76 1375 aa17.45■□□□□ 0.38
VEGFA-210ENST00000457104 HDGFL2Q7Z4V5 671 aaPredicted RBP17.45■□□□□ 0.38
VEGFA-210ENST00000457104 TERF2IPQ9NYB0 399 aa17.45■□□□□ 0.38
VEGFA-210ENST00000457104 TIMELESSQ9UNS1 1208 aa17.45■□□□□ 0.38
VEGFA-210ENST00000457104 ABCC6O95255 1503 aa17.44■□□□□ 0.38
VEGFA-210ENST00000457104 SBF2Q86WG5 1849 aa17.44■□□□□ 0.38
VEGFA-210ENST00000457104 WDR17Q8IZU2 1322 aa17.44■□□□□ 0.38
VEGFA-210ENST00000457104 LRRC37A3O60309 1634 aa17.43■□□□□ 0.38
VEGFA-210ENST00000457104 SLC24A1O60721 1099 aa17.43■□□□□ 0.38
VEGFA-210ENST00000457104 FAM196AQ6ZSG2 479 aa17.43■□□□□ 0.38
VEGFA-210ENST00000457104 PEAK1Q9H792 1746 aa17.43■□□□□ 0.38
VEGFA-210ENST00000457104 NINLQ9Y2I6 1382 aa17.42■□□□□ 0.38
VEGFA-210ENST00000457104 OVOS2A0A0J9YW53 1432 aa17.41■□□□□ 0.38
VEGFA-210ENST00000457104 DISP2A7MBM2 1401 aa17.41■□□□□ 0.38
VEGFA-210ENST00000457104 OVOS2Q6IE36 1432 aa17.41■□□□□ 0.38
VEGFA-210ENST00000457104 BAG6P46379 1132 aa17.41■□□□□ 0.38
VEGFA-210ENST00000457104 PDE3BQ13370 1112 aa17.41■□□□□ 0.38
VEGFA-210ENST00000457104 TOM1L2Q6ZVM7 507 aa17.41■□□□□ 0.38
VEGFA-210ENST00000457104 TRIM37O94972 964 aa17.4■□□□□ 0.38
VEGFA-210ENST00000457104 EN1Q05925 392 aaPredicted RBP17.39■□□□□ 0.37
VEGFA-210ENST00000457104 MYOM1P52179 1685 aa17.39■□□□□ 0.37
VEGFA-210ENST00000457104 TMF1P82094 1093 aa17.38■□□□□ 0.37
VEGFA-210ENST00000457104 CARD10Q9BWT7 1032 aa17.38■□□□□ 0.37
VEGFA-210ENST00000457104 ANKRD36BQ8N2N9 1353 aa17.37■□□□□ 0.37
VEGFA-210ENST00000457104 RREB1Q92766 1687 aa17.36■□□□□ 0.37
VEGFA-210ENST00000457104 CAMKK2Q96RR4 588 aa17.35■□□□□ 0.37
VEGFA-210ENST00000457104 KIF20BQ96Q89 1820 aa17.35■□□□□ 0.37
VEGFA-210ENST00000457104 CSB-PGBD3P0DP91 1061 aa17.34■□□□□ 0.37
VEGFA-210ENST00000457104 ERBB3P21860 1342 aa17.34■□□□□ 0.37
VEGFA-210ENST00000457104 EZH2Q15910 746 aaKnown RBP17.34■□□□□ 0.37
VEGFA-210ENST00000457104 DDB1Q16531 1140 aa17.34■□□□□ 0.37
VEGFA-210ENST00000457104 RGPD2P0DJD1 1756 aa17.33■□□□□ 0.37
VEGFA-210ENST00000457104 NUP188Q5SRE5 1749 aa17.33■□□□□ 0.37
VEGFA-210ENST00000457104 OVOS2A0A0G2JMS6 1433 aa17.33■□□□□ 0.36
VEGFA-210ENST00000457104 APBA3O96018 575 aa17.33■□□□□ 0.36
VEGFA-210ENST00000457104 CDCA7Q9BWT1 371 aaPredicted RBP17.33■□□□□ 0.36
VEGFA-210ENST00000457104 FAM208AQ9UK61 1670 aaKnown RBP17.32■□□□□ 0.36
VEGFA-210ENST00000457104 CCDC7Q96M83 1385 aa17.32■□□□□ 0.36
VEGFA-210ENST00000457104 MARCH10Q8NA82 808 aaPredicted RBP17.32■□□□□ 0.36
VEGFA-210ENST00000457104 RGPD3A6NKT7 1758 aaPredicted RBP17.31■□□□□ 0.36
VEGFA-210ENST00000457104 RGPD4Q7Z3J3 1758 aa17.31■□□□□ 0.36
VEGFA-210ENST00000457104 C11orf95C9JLR9 678 aaPredicted RBP17.31■□□□□ 0.36
VEGFA-210ENST00000457104 FYB1O15117 783 aa17.31■□□□□ 0.36
VEGFA-210ENST00000457104 FBLN1P23142 703 aa17.31■□□□□ 0.36
VEGFA-210ENST00000457104 CDCA8Q53HL2 280 aa17.31■□□□□ 0.36
VEGFA-210ENST00000457104 CCER1Q8TC90 406 aaPredicted RBP17.31■□□□□ 0.36
VEGFA-210ENST00000457104 COG3Q96JB2 828 aa17.31■□□□□ 0.36
VEGFA-210ENST00000457104 ANKRD24Q8TF21 1146 aa17.3■□□□□ 0.36
VEGFA-210ENST00000457104 IP6K1Q92551 441 aa17.3■□□□□ 0.36
VEGFA-210ENST00000457104 BCL9O00512 1426 aa17.3■□□□□ 0.36
VEGFA-210ENST00000457104 PARD3Q8TEW0 1356 aa17.29■□□□□ 0.36
VEGFA-210ENST00000457104 PSDA5PKW4 1024 aaPredicted RBP17.29■□□□□ 0.36
VEGFA-210ENST00000457104 NLRP2Q9NX02 1062 aa17.29■□□□□ 0.36
VEGFA-210ENST00000457104 LRP5O75197 1615 aa17.29■□□□□ 0.36
VEGFA-210ENST00000457104 MAP3K19Q56UN5 1328 aa17.28■□□□□ 0.36
VEGFA-210ENST00000457104 PTF1AQ7RTS3 328 aa17.28■□□□□ 0.36
VEGFA-210ENST00000457104 CARD14Q9BXL6 1004 aa17.28■□□□□ 0.36
VEGFA-210ENST00000457104 TNS2Q63HR2 1409 aa17.28■□□□□ 0.36
VEGFA-210ENST00000457104 EXOC5O00471 708 aa17.27■□□□□ 0.36
VEGFA-210ENST00000457104 GGNBP2Q9H3C7 697 aa17.27■□□□□ 0.36
VEGFA-210ENST00000457104 HOXC9P31274 260 aa17.25■□□□□ 0.35
VEGFA-210ENST00000457104 R3HDM1Q15032 1099 aaKnown RBP17.25■□□□□ 0.35
VEGFA-210ENST00000457104 BCL11BQ9C0K0 894 aaPredicted RBP17.25■□□□□ 0.35
VEGFA-210ENST00000457104 KAT6BQ8WYB5 2073 aa17.25■□□□□ 0.35
VEGFA-210ENST00000457104 NHSQ6T4R5 1651 aa17.24■□□□□ 0.35
VEGFA-210ENST00000457104 IL2RBP14784 551 aa17.24■□□□□ 0.35
VEGFA-210ENST00000457104 RRS1Q15050 365 aaKnown RBP17.23■□□□□ 0.35
VEGFA-210ENST00000457104 LTV1Q96GA3 475 aaPredicted RBP17.23■□□□□ 0.35
VEGFA-210ENST00000457104 SHANK3Q9BYB0 1731 aa17.23■□□□□ 0.35
VEGFA-210ENST00000457104 MAP2P11137 1827 aaKnown RBP17.23■□□□□ 0.35
VEGFA-210ENST00000457104 PLSCR1O15162 318 aa17.22■□□□□ 0.35
VEGFA-210ENST00000457104 HSPA5P11021 654 aaKnown RBP17.22■□□□□ 0.35
VEGFA-210ENST00000457104 AMPHP49418 695 aa17.22■□□□□ 0.35
VEGFA-210ENST00000457104 RTL1A6NKG5 1358 aa17.22■□□□□ 0.35
VEGFA-210ENST00000457104 NSD3Q9BZ95 1437 aa17.21■□□□□ 0.35
VEGFA-210ENST00000457104 ANKRD26Q9UPS8 1709 aa17.21■□□□□ 0.35
VEGFA-210ENST00000457104 EIF4G2P78344 907 aaKnown RBP eCLIP17.21■□□□□ 0.35
VEGFA-210ENST00000457104 BTAF1O14981 1849 aa17.21■□□□□ 0.35
VEGFA-210ENST00000457104 KCNQ2O43526 872 aa17.2■□□□□ 0.34
VEGFA-210ENST00000457104 PROM2Q8N271 834 aa17.2■□□□□ 0.34
VEGFA-210ENST00000457104 NBPF6Q5VWK0 638 aa17.17■□□□□ 0.34
VEGFA-210ENST00000457104 NBPF4Q96M43 638 aa17.17■□□□□ 0.34
VEGFA-210ENST00000457104 INSRP06213 1382 aa17.16■□□□□ 0.34
VEGFA-210ENST00000457104 HSP90AB2PQ58FF8 381 aa17.16■□□□□ 0.34
VEGFA-210ENST00000457104 NBPF14Q5TI25 921 aa17.16■□□□□ 0.34
VEGFA-210ENST00000457104 MEGF6O75095 1541 aa17.16■□□□□ 0.34
VEGFA-210ENST00000457104 KIF24Q5T7B8 1368 aa17.15■□□□□ 0.34
VEGFA-210ENST00000457104 ACSBG1Q96GR2 724 aa17.15■□□□□ 0.34
VEGFA-210ENST00000457104 POLR3GLQ9BT43 218 aa17.15■□□□□ 0.34
VEGFA-210ENST00000457104 DOT1LQ8TEK3 1739 aa17.15■□□□□ 0.34
VEGFA-210ENST00000457104 FLT4P35916 1363 aa17.15■□□□□ 0.34
VEGFA-210ENST00000457104 EMILIN1Q9Y6C2 1016 aa17.14■□□□□ 0.33
VEGFA-210ENST00000457104 CASZ1Q86V15 1759 aa17.14■□□□□ 0.33
VEGFA-210ENST00000457104 CGNL1Q0VF96 1302 aa17.14■□□□□ 0.33
VEGFA-210ENST00000457104 TXNRD1Q16881 649 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms