RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
CASC4P1-201ENST00000456608 HSP90AB2PQ58FF8 381 aa17.24■□□□□ 0.35
CASC4P1-201ENST00000456608 SOS2Q07890 1332 aaPredicted RBP17.24■□□□□ 0.35
CASC4P1-201ENST00000456608 SPATA31A3Q5VYP0 1347 aa17.24■□□□□ 0.35
CASC4P1-201ENST00000456608 FCHSD2O94868 740 aa17.23■□□□□ 0.35
CASC4P1-201ENST00000456608 AMPHP49418 695 aa17.23■□□□□ 0.35
CASC4P1-201ENST00000456608 PNNQ9H307 717 aaKnown RBP17.23■□□□□ 0.35
CASC4P1-201ENST00000456608 HOXC9P31274 260 aa17.22■□□□□ 0.35
CASC4P1-201ENST00000456608 LMOD2Q6P5Q4 547 aa17.22■□□□□ 0.35
CASC4P1-201ENST00000456608 TCP11L2Q8N4U5 519 aa17.22■□□□□ 0.35
CASC4P1-201ENST00000456608 RSPH6AQ9H0K4 717 aa17.22■□□□□ 0.35
CASC4P1-201ENST00000456608 ROBO1Q9Y6N7 1651 aa17.22■□□□□ 0.35
CASC4P1-201ENST00000456608 GCP02774 474 aa17.21■□□□□ 0.35
CASC4P1-201ENST00000456608 ARHGEF10O15013 1369 aa17.21■□□□□ 0.35
CASC4P1-201ENST00000456608 DLG5Q8TDM6 1919 aa17.2■□□□□ 0.34
CASC4P1-201ENST00000456608 ABCA3Q99758 1704 aa17.2■□□□□ 0.34
CASC4P1-201ENST00000456608 RGPD5Q99666 1765 aa17.2■□□□□ 0.34
CASC4P1-201ENST00000456608 IP6K1Q92551 441 aa17.2■□□□□ 0.34
CASC4P1-201ENST00000456608 COL18A1P39060 1754 aa17.19■□□□□ 0.34
CASC4P1-201ENST00000456608 PRKAR2BP31323 418 aa17.19■□□□□ 0.34
CASC4P1-201ENST00000456608 CCDC27Q2M243 656 aa17.19■□□□□ 0.34
CASC4P1-201ENST00000456608 ARHGEF25Q86VW2 580 aa17.19■□□□□ 0.34
CASC4P1-201ENST00000456608 MAPK8IP3Q9UPT6 1336 aa17.19■□□□□ 0.34
CASC4P1-201ENST00000456608 AHDC1Q5TGY3 1603 aaPredicted RBP17.18■□□□□ 0.34
CASC4P1-201ENST00000456608 RGPD2P0DJD1 1756 aa17.18■□□□□ 0.34
CASC4P1-201ENST00000456608 HMOX1P09601 288 aa17.18■□□□□ 0.34
CASC4P1-201ENST00000456608 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
CASC4P1-201ENST00000456608 GOLGA2Q08379 1002 aa17.17■□□□□ 0.34
CASC4P1-201ENST00000456608 WWC1Q8IX03 1113 aa17.17■□□□□ 0.34
CASC4P1-201ENST00000456608 RRP7AQ9Y3A4 280 aaKnown RBP17.17■□□□□ 0.34
CASC4P1-201ENST00000456608 IGSF1Q8N6C5 1336 aa17.16■□□□□ 0.34
CASC4P1-201ENST00000456608 TMPOP42166 694 aaKnown RBP17.16■□□□□ 0.34
CASC4P1-201ENST00000456608 ABCC6O95255 1503 aa17.15■□□□□ 0.34
CASC4P1-201ENST00000456608 KDRP35968 1356 aa17.15■□□□□ 0.34
CASC4P1-201ENST00000456608 GTF3C3Q9Y5Q9 886 aa17.15■□□□□ 0.34
CASC4P1-201ENST00000456608 CAMTA1Q9Y6Y1 1673 aa17.15■□□□□ 0.34
CASC4P1-201ENST00000456608 SLFN5Q08AF3 891 aa17.14■□□□□ 0.33
CASC4P1-201ENST00000456608 NEUROD2Q15784 382 aa17.14■□□□□ 0.33
CASC4P1-201ENST00000456608 SULT6B1Q6IMI4 303 aa17.14■□□□□ 0.33
CASC4P1-201ENST00000456608 AEBP1Q8IUX7 1158 aa17.14■□□□□ 0.33
CASC4P1-201ENST00000456608 PHACTR3Q96KR7 559 aa17.14■□□□□ 0.33
CASC4P1-201ENST00000456608 EYA1Q99502 592 aa17.14■□□□□ 0.33
CASC4P1-201ENST00000456608 NEFMP07197 916 aa17.13■□□□□ 0.33
CASC4P1-201ENST00000456608 WDR63Q8IWG1 891 aa17.13■□□□□ 0.33
CASC4P1-201ENST00000456608 TRMT2AQ8IZ69 625 aaKnown RBP17.13■□□□□ 0.33
CASC4P1-201ENST00000456608 PLEKHG5O94827 1062 aa17.12■□□□□ 0.33
CASC4P1-201ENST00000456608 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
CASC4P1-201ENST00000456608 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
CASC4P1-201ENST00000456608 CPDO75976 1380 aa17.11■□□□□ 0.33
CASC4P1-201ENST00000456608 ZBTB7CA1YPR0 619 aa17.11■□□□□ 0.33
CASC4P1-201ENST00000456608 DUSP27Q5VZP5 1158 aa17.11■□□□□ 0.33
CASC4P1-201ENST00000456608 CABLES1Q8TDN4 633 aa17.11■□□□□ 0.33
CASC4P1-201ENST00000456608 PHLPP1O60346 1717 aa17.11■□□□□ 0.33
CASC4P1-201ENST00000456608 LMO7Q8WWI1 1683 aa17.1■□□□□ 0.33
CASC4P1-201ENST00000456608 FAM208AQ9UK61 1670 aaKnown RBP17.1■□□□□ 0.33
CASC4P1-201ENST00000456608 COL22A1Q8NFW1 1626 aaPredicted RBP17.1■□□□□ 0.33
CASC4P1-201ENST00000456608 E9PSI1 815 aa17.1■□□□□ 0.33
CASC4P1-201ENST00000456608 RIPK4P57078 832 aa17.1■□□□□ 0.33
CASC4P1-201ENST00000456608 ZC3H6P61129 1189 aaKnown RBP17.1■□□□□ 0.33
CASC4P1-201ENST00000456608 LTV1Q96GA3 475 aaPredicted RBP17.1■□□□□ 0.33
CASC4P1-201ENST00000456608 SPINK5Q9NQ38 1064 aaPredicted RBP17.1■□□□□ 0.33
CASC4P1-201ENST00000456608 NCAPD2Q15021 1401 aa17.1■□□□□ 0.33
CASC4P1-201ENST00000456608 SUPT16HQ9Y5B9 1047 aaKnown RBP17.09■□□□□ 0.33
CASC4P1-201ENST00000456608 COL16A1Q07092 1604 aaPredicted RBP17.09■□□□□ 0.33
CASC4P1-201ENST00000456608 AXIN2Q9Y2T1 843 aa17.08■□□□□ 0.32
CASC4P1-201ENST00000456608 TOM1O60784 492 aa17.07■□□□□ 0.32
CASC4P1-201ENST00000456608 KIAA0232Q92628 1395 aa17.07■□□□□ 0.32
CASC4P1-201ENST00000456608 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
CASC4P1-201ENST00000456608 ANKRD24Q8TF21 1146 aa17.06■□□□□ 0.32
CASC4P1-201ENST00000456608 CNKSR2Q8WXI2 1034 aa17.06■□□□□ 0.32
CASC4P1-201ENST00000456608 LRRC59Q96AG4 307 aaKnown RBP17.06■□□□□ 0.32
CASC4P1-201ENST00000456608 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
CASC4P1-201ENST00000456608 IL16Q14005 1332 aa17.06■□□□□ 0.32
CASC4P1-201ENST00000456608 RNF123Q5XPI4 1314 aa17.06■□□□□ 0.32
CASC4P1-201ENST00000456608 ERBB3P21860 1342 aa17.04■□□□□ 0.32
CASC4P1-201ENST00000456608 LMOD3Q0VAK6 560 aa17.03■□□□□ 0.32
CASC4P1-201ENST00000456608 RCAN3Q9UKA8 241 aa17.03■□□□□ 0.32
CASC4P1-201ENST00000456608 USHBP1Q8N6Y0 703 aa17.02■□□□□ 0.32
CASC4P1-201ENST00000456608 CHRNA2Q15822 529 aa17.01■□□□□ 0.31
CASC4P1-201ENST00000456608 MTHFSDQ2M296 383 aaKnown RBP17.01■□□□□ 0.31
CASC4P1-201ENST00000456608 POTEDQ86YR6 584 aa17.01■□□□□ 0.31
CASC4P1-201ENST00000456608 MYH16Q9H6N6 1097 aa17.01■□□□□ 0.31
CASC4P1-201ENST00000456608 VIRMAQ69YN4 1812 aaKnown RBP17.01■□□□□ 0.31
CASC4P1-201ENST00000456608 NEFLP07196 543 aa17■□□□□ 0.31
CASC4P1-201ENST00000456608 HAP1P54257 671 aaPredicted RBP17■□□□□ 0.31
CASC4P1-201ENST00000456608 GAS2L2Q8NHY3 880 aa17■□□□□ 0.31
CASC4P1-201ENST00000456608 COL14A1Q05707 1796 aaKnown RBP17■□□□□ 0.31
CASC4P1-201ENST00000456608 LRRC37A3O60309 1634 aa17■□□□□ 0.31
CASC4P1-201ENST00000456608 UBAP1LF5GYI3 381 aa16.99■□□□□ 0.31
CASC4P1-201ENST00000456608 CALD1Q05682 793 aaKnown RBP16.99■□□□□ 0.31
CASC4P1-201ENST00000456608 PRDM11Q9NQV5 511 aa16.99■□□□□ 0.31
CASC4P1-201ENST00000456608 PIP4K2BP78356 416 aa16.98■□□□□ 0.31
CASC4P1-201ENST00000456608 CERKQ8TCT0 537 aa16.98■□□□□ 0.31
CASC4P1-201ENST00000456608 FAM83GA6ND36 823 aa16.97■□□□□ 0.31
CASC4P1-201ENST00000456608 FKBP8Q14318 412 aa16.97■□□□□ 0.31
CASC4P1-201ENST00000456608 FANCIQ9NVI1 1328 aa16.97■□□□□ 0.31
CASC4P1-201ENST00000456608 COL5A2P05997 1499 aaPredicted RBP16.97■□□□□ 0.31
CASC4P1-201ENST00000456608 HTATSF1O43719 755 aaKnown RBP16.96■□□□□ 0.31
CASC4P1-201ENST00000456608 ZNF853P0CG23 659 aa16.96■□□□□ 0.31
CASC4P1-201ENST00000456608 THUMPD2Q9BTF0 503 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms