RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 HAP1P54257 671 aaPredicted RBP15.11■□□□□ 0.01
TRAF4-206ENST00000454852 HSP90AB2PQ58FF8 381 aa15.11■□□□□ 0.01
TRAF4-206ENST00000454852 MRS2Q9HD23 443 aa15.11■□□□□ 0.01
TRAF4-206ENST00000454852 PRDM11Q9NQV5 511 aa15.11■□□□□ 0.01
TRAF4-206ENST00000454852 LRP6O75581 1613 aa15.1■□□□□ 0.01
TRAF4-206ENST00000454852 FAM208AQ9UK61 1670 aaKnown RBP15.1■□□□□ 0.01
TRAF4-206ENST00000454852 CAMTA1Q9Y6Y1 1673 aa15.1■□□□□ 0.01
TRAF4-206ENST00000454852 NWD2Q9ULI1 1742 aa15.1■□□□□ 0.01
TRAF4-206ENST00000454852 DIAPH1O60610 1272 aaKnown RBP15.1■□□□□ 0.01
TRAF4-206ENST00000454852 IL13P35225 146 aa15.1■□□□□ 0.01
TRAF4-206ENST00000454852 PNISRQ8TF01 805 aaKnown RBP15.1■□□□□ 0.01
TRAF4-206ENST00000454852 SLIT2O94813 1529 aa15.09■□□□□ 0.01
TRAF4-206ENST00000454852 FAM83GA6ND36 823 aa15.09■□□□□ 0.01
TRAF4-206ENST00000454852 AXIN2Q9Y2T1 843 aa15.09■□□□□ 0.01
TRAF4-206ENST00000454852 NCAPD2Q15021 1401 aa15.09■□□□□ 0.01
TRAF4-206ENST00000454852 RGPD5Q99666 1765 aa15.08■□□□□ 0.01
TRAF4-206ENST00000454852 COL5A2P05997 1499 aaPredicted RBP15.08■□□□□ 0.01
TRAF4-206ENST00000454852 PPM1GO15355 546 aaPredicted RBP15.08■□□□□ 0
TRAF4-206ENST00000454852 EIF4A2Q14240 407 aaKnown RBP15.08■□□□□ 0
TRAF4-206ENST00000454852 PLCH1Q4KWH8 1693 aa15.08■□□□□ 0
TRAF4-206ENST00000454852 ERBB3P21860 1342 aa15.08■□□□□ 0
TRAF4-206ENST00000454852 NRAPQ86VF7 1730 aa15.07■□□□□ 0
TRAF4-206ENST00000454852 NUDCQ9Y266 331 aa15.07■□□□□ 0
TRAF4-206ENST00000454852 PLEKHG5O94827 1062 aa15.06■□□□□ 0
TRAF4-206ENST00000454852 IGSF1Q8N6C5 1336 aa15.06■□□□□ 0
TRAF4-206ENST00000454852 KDRP35968 1356 aa15.06■□□□□ 0
TRAF4-206ENST00000454852 CHRNA2Q15822 529 aa15.05■□□□□ -0
TRAF4-206ENST00000454852 ILDR1Q86SU0 546 aaPredicted RBP15.05■□□□□ -0
TRAF4-206ENST00000454852 FNBP4Q8N3X1 1017 aaPredicted RBP15.05■□□□□ -0
TRAF4-206ENST00000454852 PLEKHG2Q9H7P9 1386 aa15.05■□□□□ -0
TRAF4-206ENST00000454852 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.05■□□□□ -0
TRAF4-206ENST00000454852 WDR17Q8IZU2 1322 aa15.04■□□□□ -0
TRAF4-206ENST00000454852 NUTM2BA6NNL0 878 aaPredicted RBP15.04■□□□□ -0
TRAF4-206ENST00000454852 NUTM2EB1AL46 878 aaPredicted RBP15.04■□□□□ -0
TRAF4-206ENST00000454852 NUTM2AQ8IVF1 878 aaPredicted RBP15.04■□□□□ -0
TRAF4-206ENST00000454852 ANKRD24Q8TF21 1146 aa15.04■□□□□ -0
TRAF4-206ENST00000454852 ADAMTS2O95450 1211 aa15.03■□□□□ -0
TRAF4-206ENST00000454852 ZBTB7CA1YPR0 619 aa15.02■□□□□ -0
TRAF4-206ENST00000454852 WDR43Q15061 677 aaKnown RBP eCLIP15.02■□□□□ -0
TRAF4-206ENST00000454852 EYA1Q99502 592 aa15.02■□□□□ -0
TRAF4-206ENST00000454852 BTG4Q9NY30 223 aa15.02■□□□□ -0
TRAF4-206ENST00000454852 BCL9LQ86UU0 1499 aa15.01□□□□□ -0.01
TRAF4-206ENST00000454852 FCHSD2O94868 740 aa15.01□□□□□ -0.01
TRAF4-206ENST00000454852 ADAMTS8Q9UP79 889 aa15.01□□□□□ -0.01
TRAF4-206ENST00000454852 RGPD2P0DJD1 1756 aa15.01□□□□□ -0.01
TRAF4-206ENST00000454852 CRB1P82279 1406 aa15□□□□□ -0.01
TRAF4-206ENST00000454852 NBPF6Q5VWK0 638 aa15□□□□□ -0.01
TRAF4-206ENST00000454852 NBPF4Q96M43 638 aa15□□□□□ -0.01
TRAF4-206ENST00000454852 U2AF1L5P0DN76 240 aaPredicted RBP14.99□□□□□ -0.01
TRAF4-206ENST00000454852 U2AF1Q01081 240 aaKnown RBP eCLIP14.99□□□□□ -0.013e-7■■□□□ 12.8
TRAF4-206ENST00000454852 UNC5CLQ8IV45 518 aa14.99□□□□□ -0.01
TRAF4-206ENST00000454852 CARD10Q9BWT7 1032 aa14.99□□□□□ -0.01
TRAF4-206ENST00000454852 RSPH6AQ9H0K4 717 aa14.99□□□□□ -0.01
TRAF4-206ENST00000454852 PNNQ9H307 717 aaKnown RBP14.99□□□□□ -0.01
TRAF4-206ENST00000454852 U2SURPO15042 1029 aaKnown RBP14.98□□□□□ -0.01
TRAF4-206ENST00000454852 LTV1Q96GA3 475 aaPredicted RBP14.98□□□□□ -0.01
TRAF4-206ENST00000454852 NGLY1Q96IV0 654 aa14.98□□□□□ -0.01
TRAF4-206ENST00000454852 C8orf37Q96NL8 207 aa14.98□□□□□ -0.01
TRAF4-206ENST00000454852 EVA1CP58658 441 aa14.97□□□□□ -0.01
TRAF4-206ENST00000454852 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
TRAF4-206ENST00000454852 PLEKHF1Q96S99 279 aa14.97□□□□□ -0.01
TRAF4-206ENST00000454852 CSB-PGBD3P0DP91 1061 aa14.96□□□□□ -0.01
TRAF4-206ENST00000454852 VPS72Q15906 364 aa14.96□□□□□ -0.01
TRAF4-206ENST00000454852 SULT6B1Q6IMI4 303 aa14.96□□□□□ -0.01
TRAF4-206ENST00000454852 LARP1Q6PKG0 1096 aaKnown RBP14.96□□□□□ -0.01
TRAF4-206ENST00000454852 FAM9BQ8IZU0 186 aa14.96□□□□□ -0.01
TRAF4-206ENST00000454852 MEX3CQ5U5Q3 659 aaKnown RBP14.95□□□□□ -0.02
TRAF4-206ENST00000454852 TOM1L2Q6ZVM7 507 aa14.95□□□□□ -0.02
TRAF4-206ENST00000454852 AEBP1Q8IUX7 1158 aa14.95□□□□□ -0.02
TRAF4-206ENST00000454852 RUNDC1Q96C34 613 aa14.95□□□□□ -0.02
TRAF4-206ENST00000454852 NLRP2Q9NX02 1062 aa14.95□□□□□ -0.02
TRAF4-206ENST00000454852 THRAP3Q9Y2W1 955 aaKnown RBP14.95□□□□□ -0.02
TRAF4-206ENST00000454852 SPATA31A1Q5TZJ5 1347 aa14.94□□□□□ -0.02
TRAF4-206ENST00000454852 SPATA31A5Q5VU36 1347 aa14.94□□□□□ -0.02
TRAF4-206ENST00000454852 SPATA31A7Q8IWB4 1347 aa14.94□□□□□ -0.02
TRAF4-206ENST00000454852 WNK3Q9BYP7 1800 aa14.94□□□□□ -0.02
TRAF4-206ENST00000454852 DISP2A7MBM2 1401 aa14.94□□□□□ -0.02
TRAF4-206ENST00000454852 ATRNO75882 1429 aa14.94□□□□□ -0.02
TRAF4-206ENST00000454852 STRN4Q9NRL3 753 aa14.94□□□□□ -0.02
TRAF4-206ENST00000454852 USP21Q9UK80 565 aa14.94□□□□□ -0.02
TRAF4-206ENST00000454852 PARP4Q9UKK3 1724 aaKnown RBP14.94□□□□□ -0.02
TRAF4-206ENST00000454852 AFF2P51816 1311 aa14.93□□□□□ -0.02
TRAF4-206ENST00000454852 HMOX1P09601 288 aa14.93□□□□□ -0.02
TRAF4-206ENST00000454852 PRKAR2BP31323 418 aa14.93□□□□□ -0.02
TRAF4-206ENST00000454852 NGEFQ8N5V2 710 aa14.93□□□□□ -0.02
TRAF4-206ENST00000454852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.93□□□□□ -0.023e-6■□□□□ 10.9
TRAF4-206ENST00000454852 PKD1L3Q7Z443 1732 aa14.92□□□□□ -0.02
TRAF4-206ENST00000454852 BARGINQ6ZT62 677 aa14.92□□□□□ -0.02
TRAF4-206ENST00000454852 CDCA7Q9BWT1 371 aaPredicted RBP14.92□□□□□ -0.02
TRAF4-206ENST00000454852 MEGF6O75095 1541 aa14.92□□□□□ -0.02
TRAF4-206ENST00000454852 OVOS2A0A0G2JMS6 1433 aa14.92□□□□□ -0.02
TRAF4-206ENST00000454852 TCP11L2Q8N4U5 519 aa14.91□□□□□ -0.02
TRAF4-206ENST00000454852 USHBP1Q8N6Y0 703 aa14.91□□□□□ -0.02
TRAF4-206ENST00000454852 AMOTQ4VCS5 1084 aa14.9□□□□□ -0.02
TRAF4-206ENST00000454852 TRPC5Q9UL62 973 aaPredicted RBP14.9□□□□□ -0.02
TRAF4-206ENST00000454852 MAPK8IP3Q9UPT6 1336 aa14.9□□□□□ -0.02
TRAF4-206ENST00000454852 GLI3P10071 1580 aa14.9□□□□□ -0.02
TRAF4-206ENST00000454852 NEFMP07197 916 aa14.89□□□□□ -0.03
TRAF4-206ENST00000454852 IL2RBP14784 551 aa14.89□□□□□ -0.03
TRAF4-206ENST00000454852 ZNF772Q68DY9 489 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms