RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 ANKRD36BQ8N2N9 1353 aa13.7□□□□□ -0.22
GTF3C2-206ENST00000454704 SBNO1A3KN83 1393 aa13.69□□□□□ -0.22
GTF3C2-206ENST00000454704 PPM1GO15355 546 aaPredicted RBP13.69□□□□□ -0.22
GTF3C2-206ENST00000454704 PSME1Q06323 249 aa13.69□□□□□ -0.22
GTF3C2-206ENST00000454704 CCDC27Q2M243 656 aa13.69□□□□□ -0.22
GTF3C2-206ENST00000454704 RTL5Q5HYW3 569 aaPredicted RBP13.69□□□□□ -0.22
GTF3C2-206ENST00000454704 LMOD2Q6P5Q4 547 aa13.69□□□□□ -0.22
GTF3C2-206ENST00000454704 EVC2Q86UK5 1308 aa13.69□□□□□ -0.22
GTF3C2-206ENST00000454704 CFAP53Q96M91 514 aa13.69□□□□□ -0.22
GTF3C2-206ENST00000454704 DLC1Q96QB1 1528 aa13.69□□□□□ -0.22
GTF3C2-206ENST00000454704 TULP4Q9NRJ4 1543 aa13.68□□□□□ -0.22
GTF3C2-206ENST00000454704 ARHGEF10O15013 1369 aa13.68□□□□□ -0.22
GTF3C2-206ENST00000454704 VPS72Q15906 364 aa13.68□□□□□ -0.22
GTF3C2-206ENST00000454704 SEPT12Q8IYM1 358 aa13.68□□□□□ -0.22
GTF3C2-206ENST00000454704 CARD14Q9BXL6 1004 aa13.68□□□□□ -0.22
GTF3C2-206ENST00000454704 ANKARQ7Z5J8 1434 aa13.67□□□□□ -0.22
GTF3C2-206ENST00000454704 PLIN1O60240 522 aa13.67□□□□□ -0.22
GTF3C2-206ENST00000454704 WDR63Q8IWG1 891 aa13.67□□□□□ -0.22
GTF3C2-206ENST00000454704 RUNDC1Q96C34 613 aa13.67□□□□□ -0.22
GTF3C2-206ENST00000454704 CCDC9Q9Y3X0 531 aaKnown RBP13.67□□□□□ -0.22
GTF3C2-206ENST00000454704 NRAPQ86VF7 1730 aa13.66□□□□□ -0.22
GTF3C2-206ENST00000454704 TRPM3Q9HCF6 1732 aaPredicted RBP13.66□□□□□ -0.22
GTF3C2-206ENST00000454704 SENP3-EIF4A1A0A087X0R7 540 aa13.66□□□□□ -0.22
GTF3C2-206ENST00000454704 APAF1O14727 1248 aa13.66□□□□□ -0.22
GTF3C2-206ENST00000454704 DEFB132Q7Z7B7 95 aa13.66□□□□□ -0.22
GTF3C2-206ENST00000454704 MORC1Q86VD1 984 aa13.66□□□□□ -0.22
GTF3C2-206ENST00000454704 PMFBP1Q8TBY8 1022 aa13.66□□□□□ -0.22
GTF3C2-206ENST00000454704 POGKQ9P215 609 aa13.66□□□□□ -0.22
GTF3C2-206ENST00000454704 PAK3O75914 559 aaPredicted RBP13.65□□□□□ -0.22
GTF3C2-206ENST00000454704 FAM161AQ3B820 660 aa13.65□□□□□ -0.22
GTF3C2-206ENST00000454704 KIF20BQ96Q89 1820 aa13.65□□□□□ -0.22
GTF3C2-206ENST00000454704 CT47B1P0C2W7 299 aaPredicted RBP13.64□□□□□ -0.23
GTF3C2-206ENST00000454704 ALS2Q96Q42 1657 aa13.64□□□□□ -0.23
GTF3C2-206ENST00000454704 FAM83GA6ND36 823 aa13.64□□□□□ -0.23
GTF3C2-206ENST00000454704 SF3B2Q13435 895 aaKnown RBP13.64□□□□□ -0.23
GTF3C2-206ENST00000454704 MAPK8IP3Q9UPT6 1336 aa13.63□□□□□ -0.23
GTF3C2-206ENST00000454704 A0A0G2JS52 829 aa13.63□□□□□ -0.23
GTF3C2-206ENST00000454704 KRT27Q7Z3Y8 459 aa13.63□□□□□ -0.23
GTF3C2-206ENST00000454704 TRAK1Q9UPV9 953 aa13.63□□□□□ -0.23
GTF3C2-206ENST00000454704 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
GTF3C2-206ENST00000454704 COL14A1Q05707 1796 aaKnown RBP13.62□□□□□ -0.23
GTF3C2-206ENST00000454704 ONECUT3O60422 494 aaPredicted RBP13.62□□□□□ -0.23
GTF3C2-206ENST00000454704 WWC1Q8IX03 1113 aa13.62□□□□□ -0.23
GTF3C2-206ENST00000454704 PRR36Q9H6K5 1346 aa13.61□□□□□ -0.23
GTF3C2-206ENST00000454704 C20orf194Q5TEA3 1177 aa13.61□□□□□ -0.23
GTF3C2-206ENST00000454704 CCDC146Q8IYE0 955 aa13.61□□□□□ -0.23
GTF3C2-206ENST00000454704 CRYBG1Q9Y4K1 1723 aa13.6□□□□□ -0.23
GTF3C2-206ENST00000454704 DEKP35659 375 aaKnown RBP13.6□□□□□ -0.23
GTF3C2-206ENST00000454704 FAM98CQ17RN3 349 aaKnown RBP13.6□□□□□ -0.23
GTF3C2-206ENST00000454704 BTG4Q9NY30 223 aa13.6□□□□□ -0.23
GTF3C2-206ENST00000454704 MYH16Q9H6N6 1097 aa13.59□□□□□ -0.23
GTF3C2-206ENST00000454704 LRP5O75197 1615 aa13.58□□□□□ -0.23
GTF3C2-206ENST00000454704 BCL11AQ9H165 835 aa13.58□□□□□ -0.24
GTF3C2-206ENST00000454704 PNNQ9H307 717 aaKnown RBP13.58□□□□□ -0.24
GTF3C2-206ENST00000454704 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
GTF3C2-206ENST00000454704 CLUAP1Q96AJ1 413 aa13.57□□□□□ -0.24
GTF3C2-206ENST00000454704 RGPD1P0DJD0 1748 aa13.57□□□□□ -0.24
GTF3C2-206ENST00000454704 ITSN1Q15811 1721 aa13.57□□□□□ -0.24
GTF3C2-206ENST00000454704 THSD7AQ9UPZ6 1657 aa13.57□□□□□ -0.24
GTF3C2-206ENST00000454704 COL3A1P02461 1466 aaPredicted RBP13.57□□□□□ -0.24
GTF3C2-206ENST00000454704 NPM2Q86SE8 214 aaKnown RBP13.56□□□□□ -0.24
GTF3C2-206ENST00000454704 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
GTF3C2-206ENST00000454704 SLC12A5Q9H2X9 1139 aa13.56□□□□□ -0.24
GTF3C2-206ENST00000454704 IL16Q14005 1332 aa13.56□□□□□ -0.24
GTF3C2-206ENST00000454704 ATP7BP35670 1465 aa13.56□□□□□ -0.24
GTF3C2-206ENST00000454704 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
GTF3C2-206ENST00000454704 CANXP27824 592 aaKnown RBP13.56□□□□□ -0.24
GTF3C2-206ENST00000454704 C8orf34Q49A92 452 aa13.56□□□□□ -0.24
GTF3C2-206ENST00000454704 TCP11L2Q8N4U5 519 aa13.56□□□□□ -0.24
GTF3C2-206ENST00000454704 SPINK5Q9NQ38 1064 aaPredicted RBP13.56□□□□□ -0.24
GTF3C2-206ENST00000454704 DAXXQ9UER7 740 aaPredicted RBP13.56□□□□□ -0.24
GTF3C2-206ENST00000454704 SPATA31A5Q5VU36 1347 aa13.55□□□□□ -0.24
GTF3C2-206ENST00000454704 SPATA31A7Q8IWB4 1347 aa13.55□□□□□ -0.24
GTF3C2-206ENST00000454704 BAG6P46379 1132 aa13.55□□□□□ -0.24
GTF3C2-206ENST00000454704 FAM182BQ5T319 152 aa13.55□□□□□ -0.24
GTF3C2-206ENST00000454704 PRDM11Q9NQV5 511 aa13.55□□□□□ -0.24
GTF3C2-206ENST00000454704 TERF2IPQ9NYB0 399 aa13.55□□□□□ -0.24
GTF3C2-206ENST00000454704 PHRF1Q9P1Y6 1649 aaKnown RBP13.54□□□□□ -0.24
GTF3C2-206ENST00000454704 MTHFSP49914 203 aa13.54□□□□□ -0.24
GTF3C2-206ENST00000454704 RARSP54136 660 aaKnown RBP13.54□□□□□ -0.24
GTF3C2-206ENST00000454704 NBR1Q14596 966 aa13.54□□□□□ -0.24
GTF3C2-206ENST00000454704 TNS1Q9HBL0 1735 aaKnown RBP13.54□□□□□ -0.24
GTF3C2-206ENST00000454704 KIAA0232Q92628 1395 aa13.53□□□□□ -0.24
GTF3C2-206ENST00000454704 BCAR3O75815 825 aa13.53□□□□□ -0.24
GTF3C2-206ENST00000454704 TOPAZ1Q8N9V7 1692 aa13.53□□□□□ -0.24
GTF3C2-206ENST00000454704 A0A1W2PP64 1363 aa13.52□□□□□ -0.24
GTF3C2-206ENST00000454704 EN1Q05925 392 aaPredicted RBP13.52□□□□□ -0.25
GTF3C2-206ENST00000454704 CHRNA2Q15822 529 aa13.51□□□□□ -0.25
GTF3C2-206ENST00000454704 NUDT16Q96DE0 195 aaKnown RBP13.51□□□□□ -0.25
GTF3C2-206ENST00000454704 NUTM2GQ5VZR2 741 aa13.5□□□□□ -0.25
GTF3C2-206ENST00000454704 DISP2A7MBM2 1401 aa13.5□□□□□ -0.25
GTF3C2-206ENST00000454704 CD163L1Q9NR16 1453 aa13.5□□□□□ -0.25
GTF3C2-206ENST00000454704 NRKQ7Z2Y5 1582 aa13.49□□□□□ -0.25
GTF3C2-206ENST00000454704 HDGFL2Q7Z4V5 671 aaPredicted RBP13.49□□□□□ -0.25
GTF3C2-206ENST00000454704 ZNF428Q96B54 188 aa13.49□□□□□ -0.25
GTF3C2-206ENST00000454704 STRN4Q9NRL3 753 aa13.49□□□□□ -0.25
GTF3C2-206ENST00000454704 SPATA31A1Q5TZJ5 1347 aa13.49□□□□□ -0.25
GTF3C2-206ENST00000454704 NEFMP07197 916 aa13.48□□□□□ -0.25
GTF3C2-206ENST00000454704 ZC3H6P61129 1189 aaKnown RBP13.48□□□□□ -0.25
GTF3C2-206ENST00000454704 CDK19Q9BWU1 502 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms