RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 ARHGEF25Q86VW2 580 aa11.11□□□□□ -0.63
AC007879.2-201ENST00000454444 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.11□□□□□ -0.63
AC007879.2-201ENST00000454444 CARD10Q9BWT7 1032 aa11.11□□□□□ -0.63
AC007879.2-201ENST00000454444 AXIN2Q9Y2T1 843 aa11.11□□□□□ -0.63
AC007879.2-201ENST00000454444 KTN1Q86UP2 1357 aaKnown RBP11.11□□□□□ -0.63
AC007879.2-201ENST00000454444 TOPAZ1Q8N9V7 1692 aa11.11□□□□□ -0.63
AC007879.2-201ENST00000454444 HDGFL2Q7Z4V5 671 aaPredicted RBP11.1□□□□□ -0.63
AC007879.2-201ENST00000454444 CARD11Q9BXL7 1154 aa11.1□□□□□ -0.63
AC007879.2-201ENST00000454444 NLRP2Q9NX02 1062 aa11.09□□□□□ -0.63
AC007879.2-201ENST00000454444 YY1P25490 414 aa11.08□□□□□ -0.64
AC007879.2-201ENST00000454444 MARCH10Q8NA82 808 aaPredicted RBP11.08□□□□□ -0.64
AC007879.2-201ENST00000454444 STK32BQ9NY57 414 aa11.08□□□□□ -0.64
AC007879.2-201ENST00000454444 TERF2IPQ9NYB0 399 aa11.08□□□□□ -0.64
AC007879.2-201ENST00000454444 CPSF1Q10570 1443 aaKnown RBP11.08□□□□□ -0.64
AC007879.2-201ENST00000454444 LMO7Q8WWI1 1683 aa11.08□□□□□ -0.64
AC007879.2-201ENST00000454444 TNS1Q9HBL0 1735 aaKnown RBP11.07□□□□□ -0.64
AC007879.2-201ENST00000454444 CCDC7Q96M83 1385 aa11.07□□□□□ -0.64
AC007879.2-201ENST00000454444 QRICH2Q9H0J4 1663 aa11.07□□□□□ -0.64
AC007879.2-201ENST00000454444 SLIT3O75094 1523 aa11.06□□□□□ -0.64
AC007879.2-201ENST00000454444 TXNRD1Q16881 649 aa11.05□□□□□ -0.64
AC007879.2-201ENST00000454444 NME9Q86XW9 330 aa11.05□□□□□ -0.64
AC007879.2-201ENST00000454444 TONSLQ96HA7 1378 aa11.04□□□□□ -0.64
AC007879.2-201ENST00000454444 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
AC007879.2-201ENST00000454444 ZBTB7AO95365 584 aa11.04□□□□□ -0.64
AC007879.2-201ENST00000454444 IL2RBP14784 551 aa11.04□□□□□ -0.64
AC007879.2-201ENST00000454444 PTF1AQ7RTS3 328 aa11.04□□□□□ -0.64
AC007879.2-201ENST00000454444 ACSBG1Q96GR2 724 aa11.04□□□□□ -0.64
AC007879.2-201ENST00000454444 SLC12A5Q9H2X9 1139 aa11.04□□□□□ -0.64
AC007879.2-201ENST00000454444 NINLQ9Y2I6 1382 aa11.03□□□□□ -0.64
AC007879.2-201ENST00000454444 TRPM1Q7Z4N2 1603 aa11.03□□□□□ -0.64
AC007879.2-201ENST00000454444 ANKRD24Q8TF21 1146 aa11.03□□□□□ -0.64
AC007879.2-201ENST00000454444 ATF5Q9Y2D1 282 aaPredicted RBP11.03□□□□□ -0.64
AC007879.2-201ENST00000454444 PARP4Q9UKK3 1724 aaKnown RBP11.03□□□□□ -0.64
AC007879.2-201ENST00000454444 BCL9O00512 1426 aa11.02□□□□□ -0.64
AC007879.2-201ENST00000454444 SLC15A2Q16348 729 aa11.02□□□□□ -0.65
AC007879.2-201ENST00000454444 PROM2Q8N271 834 aa11.02□□□□□ -0.65
AC007879.2-201ENST00000454444 LTV1Q96GA3 475 aaPredicted RBP11.02□□□□□ -0.65
AC007879.2-201ENST00000454444 ANO8Q9HCE9 1232 aaPredicted RBP11.02□□□□□ -0.65
AC007879.2-201ENST00000454444 ERBB3P21860 1342 aa11.02□□□□□ -0.65
AC007879.2-201ENST00000454444 SBNO2Q9Y2G9 1366 aa11.02□□□□□ -0.65
AC007879.2-201ENST00000454444 DDX54Q8TDD1 881 aaKnown RBP11.01□□□□□ -0.65
AC007879.2-201ENST00000454444 COG3Q96JB2 828 aa11.01□□□□□ -0.65
AC007879.2-201ENST00000454444 PIK3C2AO00443 1686 aa11.01□□□□□ -0.65
AC007879.2-201ENST00000454444 USP31Q70CQ4 1352 aa11.01□□□□□ -0.65
AC007879.2-201ENST00000454444 AMPHP49418 695 aa11□□□□□ -0.65
AC007879.2-201ENST00000454444 PUS7Q96PZ0 661 aaKnown RBP11□□□□□ -0.65
AC007879.2-201ENST00000454444 MTFR1LQ9H019 292 aa11□□□□□ -0.65
AC007879.2-201ENST00000454444 RREB1Q92766 1687 aa10.99□□□□□ -0.65
AC007879.2-201ENST00000454444 NUP188Q5SRE5 1749 aa10.99□□□□□ -0.65
AC007879.2-201ENST00000454444 IP6K1Q92551 441 aa10.99□□□□□ -0.65
AC007879.2-201ENST00000454444 SYTL4Q96C24 671 aaPredicted RBP10.99□□□□□ -0.65
AC007879.2-201ENST00000454444 PDGFDQ9GZP0 370 aaPredicted RBP10.99□□□□□ -0.65
AC007879.2-201ENST00000454444 TNS2Q63HR2 1409 aa10.99□□□□□ -0.65
AC007879.2-201ENST00000454444 EDC4Q6P2E9 1401 aaKnown RBP10.99□□□□□ -0.65
AC007879.2-201ENST00000454444 LRRC37A3O60309 1634 aa10.98□□□□□ -0.65
AC007879.2-201ENST00000454444 ST20-MTHFSA0A0A6YYL1 179 aa10.97□□□□□ -0.65
AC007879.2-201ENST00000454444 FHDC1Q9C0D6 1143 aaPredicted RBP10.97□□□□□ -0.65
AC007879.2-201ENST00000454444 NFAT5O94916 1531 aa10.97□□□□□ -0.65
AC007879.2-201ENST00000454444 COL18A1P39060 1754 aa10.97□□□□□ -0.65
AC007879.2-201ENST00000454444 PEAK1Q9H792 1746 aa10.96□□□□□ -0.65
AC007879.2-201ENST00000454444 ABCC6O95255 1503 aa10.96□□□□□ -0.65
AC007879.2-201ENST00000454444 A0A1W2PP64 1363 aa10.96□□□□□ -0.65
AC007879.2-201ENST00000454444 POLD1P28340 1107 aa10.96□□□□□ -0.65
AC007879.2-201ENST00000454444 PTGER2P43116 358 aa10.96□□□□□ -0.65
AC007879.2-201ENST00000454444 KLHL34Q8N239 644 aa10.96□□□□□ -0.65
AC007879.2-201ENST00000454444 ARXQ96QS3 562 aa10.96□□□□□ -0.65
AC007879.2-201ENST00000454444 SYT17Q9BSW7 474 aa10.96□□□□□ -0.65
AC007879.2-201ENST00000454444 TMF1P82094 1093 aa10.95□□□□□ -0.66
AC007879.2-201ENST00000454444 SLC27A3Q5K4L6 730 aa10.95□□□□□ -0.66
AC007879.2-201ENST00000454444 TFCP2L1Q9NZI6 479 aa10.95□□□□□ -0.66
AC007879.2-201ENST00000454444 HMGB2P26583 209 aaKnown RBP10.94□□□□□ -0.66
AC007879.2-201ENST00000454444 CDCA8Q53HL2 280 aa10.94□□□□□ -0.66
AC007879.2-201ENST00000454444 ZCRB1Q8TBF4 217 aaKnown RBP10.94□□□□□ -0.66
AC007879.2-201ENST00000454444 AKAP12Q02952 1782 aa10.94□□□□□ -0.66
AC007879.2-201ENST00000454444 RGPD3A6NKT7 1758 aaPredicted RBP10.93□□□□□ -0.66
AC007879.2-201ENST00000454444 RGPD4Q7Z3J3 1758 aa10.93□□□□□ -0.66
AC007879.2-201ENST00000454444 MAP3K19Q56UN5 1328 aa10.93□□□□□ -0.66
AC007879.2-201ENST00000454444 MSH5O43196 834 aa10.93□□□□□ -0.66
AC007879.2-201ENST00000454444 HOXC9P31274 260 aa10.93□□□□□ -0.66
AC007879.2-201ENST00000454444 PRIM1P49642 420 aaKnown RBP10.93□□□□□ -0.66
AC007879.2-201ENST00000454444 GPR162Q16538 588 aa10.93□□□□□ -0.66
AC007879.2-201ENST00000454444 SLC16A10Q8TF71 515 aa10.93□□□□□ -0.66
AC007879.2-201ENST00000454444 RAPGEF4Q8WZA2 1011 aa10.93□□□□□ -0.66
AC007879.2-201ENST00000454444 CD163L1Q9NR16 1453 aa10.93□□□□□ -0.66
AC007879.2-201ENST00000454444 PELP1Q8IZL8 1130 aaKnown RBP10.92□□□□□ -0.66
AC007879.2-201ENST00000454444 SBF2Q86WG5 1849 aa10.91□□□□□ -0.66
AC007879.2-201ENST00000454444 RGPD5Q99666 1765 aa10.91□□□□□ -0.66
AC007879.2-201ENST00000454444 FBLN1P23142 703 aa10.91□□□□□ -0.66
AC007879.2-201ENST00000454444 RRS1Q15050 365 aaKnown RBP10.91□□□□□ -0.66
AC007879.2-201ENST00000454444 ZNF827Q17R98 1081 aa10.91□□□□□ -0.66
AC007879.2-201ENST00000454444 TESK2Q96S53 571 aa10.91□□□□□ -0.66
AC007879.2-201ENST00000454444 GGNBP2Q9H3C7 697 aa10.91□□□□□ -0.66
AC007879.2-201ENST00000454444 LRRC4BQ9NT99 713 aa10.91□□□□□ -0.66
AC007879.2-201ENST00000454444 CCNL1Q9UK58 526 aaPredicted RBP10.91□□□□□ -0.66
AC007879.2-201ENST00000454444 SMG6Q86US8 1419 aaKnown RBP10.91□□□□□ -0.66
AC007879.2-201ENST00000454444 CGNL1Q0VF96 1302 aa10.9□□□□□ -0.66
AC007879.2-201ENST00000454444 MON2Q7Z3U7 1717 aa10.9□□□□□ -0.66
AC007879.2-201ENST00000454444 TATP17735 454 aaPredicted RBP10.9□□□□□ -0.66
AC007879.2-201ENST00000454444 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.67
AC007879.2-201ENST00000454444 USP47Q96K76 1375 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms