RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 PRKCSHP14314 528 aaPredicted RBP14.34□□□□□ -0.11
SEC16A-207ENST00000453963 LRRCC1Q9C099 1032 aa14.34□□□□□ -0.11
SEC16A-207ENST00000453963 NEUROD6Q96NK8 337 aa14.34□□□□□ -0.11
SEC16A-207ENST00000453963 TNMDQ9H2S6 317 aa14.34□□□□□ -0.11
SEC16A-207ENST00000453963 ANKLE2Q86XL3 938 aa14.33□□□□□ -0.12
SEC16A-207ENST00000453963 RPAP2Q8IXW5 612 aaPredicted RBP14.33□□□□□ -0.12
SEC16A-207ENST00000453963 C11orf95C9JLR9 678 aaPredicted RBP14.33□□□□□ -0.12
SEC16A-207ENST00000453963 ABCA10Q8WWZ4 1543 aa14.32□□□□□ -0.12
SEC16A-207ENST00000453963 EPRSP07814 1512 aaKnown RBP14.32□□□□□ -0.12
SEC16A-207ENST00000453963 BCL11BQ9C0K0 894 aaPredicted RBP14.32□□□□□ -0.12
SEC16A-207ENST00000453963 WASHC4Q2M389 1173 aa14.31□□□□□ -0.12
SEC16A-207ENST00000453963 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
SEC16A-207ENST00000453963 SULT6B1Q6IMI4 303 aa14.31□□□□□ -0.12
SEC16A-207ENST00000453963 PDCL2Q8N4E4 241 aa14.31□□□□□ -0.12
SEC16A-207ENST00000453963 NCOA1Q15788 1441 aa14.31□□□□□ -0.12
SEC16A-207ENST00000453963 C20orf194Q5TEA3 1177 aa14.31□□□□□ -0.12
SEC16A-207ENST00000453963 ZSCAN31Q96LW9 406 aaPredicted RBP14.31□□□□□ -0.12
SEC16A-207ENST00000453963 XBP1P17861 261 aa14.31□□□□□ -0.12
SEC16A-207ENST00000453963 STK38Q15208 465 aa14.31□□□□□ -0.12
SEC16A-207ENST00000453963 FMNL2Q96PY5 1086 aa14.31□□□□□ -0.12
SEC16A-207ENST00000453963 TBC1D2Q9BYX2 928 aa14.3□□□□□ -0.12
SEC16A-207ENST00000453963 FILIP1LQ4L180 1135 aa14.3□□□□□ -0.12
SEC16A-207ENST00000453963 LEKR1Q6ZMV7 388 aa14.3□□□□□ -0.12
SEC16A-207ENST00000453963 JMYQ8N9B5 988 aa14.3□□□□□ -0.12
SEC16A-207ENST00000453963 POGZQ7Z3K3 1410 aa14.3□□□□□ -0.12
SEC16A-207ENST00000453963 LARP1BQ659C4 914 aaKnown RBP14.3□□□□□ -0.12
SEC16A-207ENST00000453963 SMARCE1Q969G3 411 aa14.3□□□□□ -0.12
SEC16A-207ENST00000453963 RTEL1-TNFRSF6BF6WH68 1400 aa14.3□□□□□ -0.12
SEC16A-207ENST00000453963 CCDC43Q96MW1 224 aaKnown RBP14.3□□□□□ -0.12
SEC16A-207ENST00000453963 BRMS1Q9HCU9 246 aa14.3□□□□□ -0.12
SEC16A-207ENST00000453963 NKTRP30414 1462 aaKnown RBP14.29□□□□□ -0.12
SEC16A-207ENST00000453963 TATP17735 454 aaPredicted RBP14.29□□□□□ -0.12
SEC16A-207ENST00000453963 RARSP54136 660 aaKnown RBP14.29□□□□□ -0.12
SEC16A-207ENST00000453963 DNAJC5BQ9UF47 199 aa14.29□□□□□ -0.12
SEC16A-207ENST00000453963 TMEM57Q8N5G2 664 aa14.29□□□□□ -0.12
SEC16A-207ENST00000453963 RBM33Q96EV2 1170 aaKnown RBP14.29□□□□□ -0.12
SEC16A-207ENST00000453963 CDK13Q14004 1512 aaKnown RBP14.29□□□□□ -0.12
SEC16A-207ENST00000453963 LRPPRCP42704 1394 aaKnown RBP14.28□□□□□ -0.12
SEC16A-207ENST00000453963 MPNDQ8N594 471 aa14.28□□□□□ -0.12
SEC16A-207ENST00000453963 NUP62CLQ9H1M0 184 aa14.28□□□□□ -0.12
SEC16A-207ENST00000453963 STRN4Q9NRL3 753 aa14.28□□□□□ -0.12
SEC16A-207ENST00000453963 SYCE3A1L190 88 aa14.28□□□□□ -0.12
SEC16A-207ENST00000453963 NAP1L1P55209 391 aaKnown RBP14.28□□□□□ -0.12
SEC16A-207ENST00000453963 CAGE1Q8TC20 777 aa14.28□□□□□ -0.12
SEC16A-207ENST00000453963 ATAD2Q6PL18 1390 aa14.28□□□□□ -0.12
SEC16A-207ENST00000453963 SUPT6HQ7KZ85 1726 aaKnown RBP14.28□□□□□ -0.12
SEC16A-207ENST00000453963 FCHSD2O94868 740 aa14.28□□□□□ -0.12
SEC16A-207ENST00000453963 MAP3K1Q13233 1512 aa14.28□□□□□ -0.12
SEC16A-207ENST00000453963 H0YHG0 523 aa14.27□□□□□ -0.12
SEC16A-207ENST00000453963 PIP4K2AP48426 406 aaPredicted RBP14.27□□□□□ -0.12
SEC16A-207ENST00000453963 PDCL3Q9H2J4 239 aa14.27□□□□□ -0.12
SEC16A-207ENST00000453963 PPP6R1Q9UPN7 881 aa14.27□□□□□ -0.12
SEC16A-207ENST00000453963 HDGFL1Q5TGJ6 251 aa14.27□□□□□ -0.13
SEC16A-207ENST00000453963 CCDC61Q9Y6R9 512 aa14.27□□□□□ -0.13
SEC16A-207ENST00000453963 TMPOP42166 694 aaKnown RBP14.26□□□□□ -0.13
SEC16A-207ENST00000453963 CFAP45Q9UL16 551 aa14.26□□□□□ -0.13
SEC16A-207ENST00000453963 ZNF530Q6P9A1 599 aaPredicted RBP14.26□□□□□ -0.13
SEC16A-207ENST00000453963 SKAP1Q86WV1 359 aa14.26□□□□□ -0.13
SEC16A-207ENST00000453963 MAGI1Q96QZ7 1491 aaPredicted RBP14.26□□□□□ -0.13
SEC16A-207ENST00000453963 SERPINC1P01008 464 aa14.26□□□□□ -0.13
SEC16A-207ENST00000453963 SART3Q15020 963 aaKnown RBP14.26□□□□□ -0.13
SEC16A-207ENST00000453963 TAF3Q5VWG9 929 aa14.26□□□□□ -0.13
SEC16A-207ENST00000453963 CEP57L1Q8IYX8 460 aa14.26□□□□□ -0.13
SEC16A-207ENST00000453963 SPATA32Q96LK8 384 aa14.26□□□□□ -0.13
SEC16A-207ENST00000453963 IQGAP2Q13576 1575 aa14.26□□□□□ -0.13
SEC16A-207ENST00000453963 LAMC3Q9Y6N6 1575 aa14.25□□□□□ -0.13
SEC16A-207ENST00000453963 CEBPZQ03701 1054 aaKnown RBP14.25□□□□□ -0.13
SEC16A-207ENST00000453963 BLOC1S2Q6QNY1 142 aa14.25□□□□□ -0.13
SEC16A-207ENST00000453963 TNPO1Q92973 898 aaKnown RBP14.25□□□□□ -0.13
SEC16A-207ENST00000453963 TBC1D2BQ9UPU7 963 aa14.25□□□□□ -0.13
SEC16A-207ENST00000453963 ARHGEF11O15085 1522 aa14.25□□□□□ -0.13
SEC16A-207ENST00000453963 CCDC141Q6ZP82 1450 aa14.25□□□□□ -0.13
SEC16A-207ENST00000453963 PATL2C9JE40 543 aaKnown RBP14.25□□□□□ -0.13
SEC16A-207ENST00000453963 CBFA2T2O43439 604 aa14.25□□□□□ -0.13
SEC16A-207ENST00000453963 MCM5P33992 734 aa14.25□□□□□ -0.13
SEC16A-207ENST00000453963 ME1P48163 572 aa14.25□□□□□ -0.13
SEC16A-207ENST00000453963 DCTN1Q14203 1278 aa14.25□□□□□ -0.13
SEC16A-207ENST00000453963 ALDH1L2Q3SY69 923 aa14.25□□□□□ -0.13
SEC16A-207ENST00000453963 RBM42Q9BTD8 480 aaKnown RBP14.25□□□□□ -0.13
SEC16A-207ENST00000453963 KIF2AO00139 706 aaPredicted RBP14.25□□□□□ -0.13
SEC16A-207ENST00000453963 ERLIN1O75477 346 aa14.25□□□□□ -0.13
SEC16A-207ENST00000453963 DUSP27Q5VZP5 1158 aa14.25□□□□□ -0.13
SEC16A-207ENST00000453963 PDRG1Q9NUG6 133 aa14.25□□□□□ -0.13
SEC16A-207ENST00000453963 MAP3K11Q16584 847 aa14.24□□□□□ -0.13
SEC16A-207ENST00000453963 CD109Q6YHK3 1445 aa14.24□□□□□ -0.13
SEC16A-207ENST00000453963 OFD1O75665 1012 aa14.24□□□□□ -0.13
SEC16A-207ENST00000453963 DNAJC2Q99543 621 aaKnown RBP14.24□□□□□ -0.13
SEC16A-207ENST00000453963 DACH1Q9UI36 760 aa14.24□□□□□ -0.13
SEC16A-207ENST00000453963 TOM1L2Q6ZVM7 507 aa14.24□□□□□ -0.13
SEC16A-207ENST00000453963 PRDM11Q9NQV5 511 aa14.24□□□□□ -0.13
SEC16A-207ENST00000453963 ABCC11Q96J66 1382 aa14.24□□□□□ -0.13
SEC16A-207ENST00000453963 EIF3JO75822 258 aaKnown RBP14.23□□□□□ -0.13
SEC16A-207ENST00000453963 TTLL5Q6EMB2 1281 aa14.23□□□□□ -0.13
SEC16A-207ENST00000453963 NFE2L2Q16236 605 aa14.23□□□□□ -0.13
SEC16A-207ENST00000453963 DHX29Q7Z478 1369 aaKnown RBP14.23□□□□□ -0.13
SEC16A-207ENST00000453963 PLB1Q6P1J6 1458 aa14.23□□□□□ -0.13
SEC16A-207ENST00000453963 CT47A1Q5JQC4 288 aaPredicted RBP14.22□□□□□ -0.13
SEC16A-207ENST00000453963 KRT32Q14532 448 aa14.22□□□□□ -0.13
SEC16A-207ENST00000453963 CCDC183Q5T5S1 534 aa14.22□□□□□ -0.13
SEC16A-207ENST00000453963 SSH1Q8WYL5 1049 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms