RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 SBF2Q86WG5 1849 aa19.9■□□□□ 0.78
RFTN1-207ENST00000453536 TCP11L2Q8N4U5 519 aa19.9■□□□□ 0.78
RFTN1-207ENST00000453536 RGPD2P0DJD1 1756 aa19.9■□□□□ 0.78
RFTN1-207ENST00000453536 EN1Q05925 392 aaPredicted RBP19.89■□□□□ 0.77
RFTN1-207ENST00000453536 OVOS2A0A0J9YW53 1432 aa19.88■□□□□ 0.77
RFTN1-207ENST00000453536 OVOS2Q6IE36 1432 aa19.88■□□□□ 0.77
RFTN1-207ENST00000453536 EDC4Q6P2E9 1401 aaKnown RBP19.88■□□□□ 0.77
RFTN1-207ENST00000453536 TRIM37O94972 964 aa19.88■□□□□ 0.77
RFTN1-207ENST00000453536 BARGINQ6ZT62 677 aa19.88■□□□□ 0.77
RFTN1-207ENST00000453536 USP31Q70CQ4 1352 aa19.87■□□□□ 0.77
RFTN1-207ENST00000453536 CCDC125Q86Z20 511 aa19.87■□□□□ 0.77
RFTN1-207ENST00000453536 TOM1L2Q6ZVM7 507 aa19.86■□□□□ 0.77
RFTN1-207ENST00000453536 PTF1AQ7RTS3 328 aa19.86■□□□□ 0.77
RFTN1-207ENST00000453536 KIF20BQ96Q89 1820 aa19.86■□□□□ 0.77
RFTN1-207ENST00000453536 WDR17Q8IZU2 1322 aa19.85■□□□□ 0.77
RFTN1-207ENST00000453536 PSDA5PKW4 1024 aaPredicted RBP19.85■□□□□ 0.77
RFTN1-207ENST00000453536 HDGFL2Q7Z4V5 671 aaPredicted RBP19.85■□□□□ 0.77
RFTN1-207ENST00000453536 SF3B2Q13435 895 aaKnown RBP19.84■□□□□ 0.77
RFTN1-207ENST00000453536 NUP188Q5SRE5 1749 aa19.84■□□□□ 0.77
RFTN1-207ENST00000453536 RREB1Q92766 1687 aa19.84■□□□□ 0.77
RFTN1-207ENST00000453536 EZH2Q15910 746 aaKnown RBP19.83■□□□□ 0.77
RFTN1-207ENST00000453536 KCNH5Q8NCM2 988 aa19.82■□□□□ 0.76
RFTN1-207ENST00000453536 DISP2A7MBM2 1401 aa19.82■□□□□ 0.76
RFTN1-207ENST00000453536 CSB-PGBD3P0DP91 1061 aa19.81■□□□□ 0.76
RFTN1-207ENST00000453536 PDE3BQ13370 1112 aa19.81■□□□□ 0.76
RFTN1-207ENST00000453536 TERF2IPQ9NYB0 399 aa19.8■□□□□ 0.76
RFTN1-207ENST00000453536 BAG6P46379 1132 aa19.79■□□□□ 0.76
RFTN1-207ENST00000453536 ANKRD36BQ8N2N9 1353 aa19.79■□□□□ 0.76
RFTN1-207ENST00000453536 ABCC6O95255 1503 aa19.78■□□□□ 0.76
RFTN1-207ENST00000453536 FAM196AQ6ZSG2 479 aa19.78■□□□□ 0.76
RFTN1-207ENST00000453536 MARCH10Q8NA82 808 aaPredicted RBP19.78■□□□□ 0.76
RFTN1-207ENST00000453536 CCER1Q8TC90 406 aaPredicted RBP19.78■□□□□ 0.76
RFTN1-207ENST00000453536 THRAP3Q9Y2W1 955 aaKnown RBP19.78■□□□□ 0.76
RFTN1-207ENST00000453536 TMF1P82094 1093 aa19.77■□□□□ 0.76
RFTN1-207ENST00000453536 LTV1Q96GA3 475 aaPredicted RBP19.77■□□□□ 0.76
RFTN1-207ENST00000453536 PUS7Q96PZ0 661 aaKnown RBP19.77■□□□□ 0.76
RFTN1-207ENST00000453536 GGNBP2Q9H3C7 697 aa19.77■□□□□ 0.76
RFTN1-207ENST00000453536 FAM208AQ9UK61 1670 aaKnown RBP19.77■□□□□ 0.76
RFTN1-207ENST00000453536 ERBB3P21860 1342 aa19.76■□□□□ 0.75
RFTN1-207ENST00000453536 APBA3O96018 575 aa19.76■□□□□ 0.75
RFTN1-207ENST00000453536 CAMKK2Q96RR4 588 aa19.76■□□□□ 0.75
RFTN1-207ENST00000453536 DDB1Q16531 1140 aa19.75■□□□□ 0.75
RFTN1-207ENST00000453536 ANKRD24Q8TF21 1146 aa19.75■□□□□ 0.75
RFTN1-207ENST00000453536 CARD10Q9BWT7 1032 aa19.75■□□□□ 0.75
RFTN1-207ENST00000453536 CARD14Q9BXL6 1004 aa19.75■□□□□ 0.75
RFTN1-207ENST00000453536 SHANK3Q9BYB0 1731 aa19.75■□□□□ 0.75
RFTN1-207ENST00000453536 MAP3K19Q56UN5 1328 aa19.75■□□□□ 0.75
RFTN1-207ENST00000453536 NINLQ9Y2I6 1382 aa19.74■□□□□ 0.75
RFTN1-207ENST00000453536 RRS1Q15050 365 aaKnown RBP19.74■□□□□ 0.75
RFTN1-207ENST00000453536 OVOS2A0A0G2JMS6 1433 aa19.74■□□□□ 0.75
RFTN1-207ENST00000453536 R3HDM1Q15032 1099 aaKnown RBP19.73■□□□□ 0.75
RFTN1-207ENST00000453536 NLRP2Q9NX02 1062 aa19.73■□□□□ 0.75
RFTN1-207ENST00000453536 CLSPNQ9HAW4 1339 aa19.73■□□□□ 0.75
RFTN1-207ENST00000453536 FYB1O15117 783 aa19.72■□□□□ 0.75
RFTN1-207ENST00000453536 POLR3GLQ9BT43 218 aa19.72■□□□□ 0.75
RFTN1-207ENST00000453536 NSD3Q9BZ95 1437 aa19.72■□□□□ 0.75
RFTN1-207ENST00000453536 KAT6BQ8WYB5 2073 aa19.72■□□□□ 0.75
RFTN1-207ENST00000453536 TNS2Q63HR2 1409 aa19.71■□□□□ 0.75
RFTN1-207ENST00000453536 HSPA5P11021 654 aaKnown RBP19.7■□□□□ 0.74
RFTN1-207ENST00000453536 COG3Q96JB2 828 aa19.7■□□□□ 0.74
RFTN1-207ENST00000453536 LRP5O75197 1615 aa19.69■□□□□ 0.74
RFTN1-207ENST00000453536 CCDC7Q96M83 1385 aa19.69■□□□□ 0.74
RFTN1-207ENST00000453536 NHSQ6T4R5 1651 aa19.68■□□□□ 0.74
RFTN1-207ENST00000453536 KCNQ2O43526 872 aa19.68■□□□□ 0.74
RFTN1-207ENST00000453536 HOXC9P31274 260 aa19.68■□□□□ 0.74
RFTN1-207ENST00000453536 IP6K1Q92551 441 aa19.68■□□□□ 0.74
RFTN1-207ENST00000453536 BTAF1O14981 1849 aa19.67■□□□□ 0.74
RFTN1-207ENST00000453536 C11orf95C9JLR9 678 aaPredicted RBP19.67■□□□□ 0.74
RFTN1-207ENST00000453536 USHBP1Q8N6Y0 703 aa19.67■□□□□ 0.74
RFTN1-207ENST00000453536 ACSBG1Q96GR2 724 aa19.67■□□□□ 0.74
RFTN1-207ENST00000453536 TIMELESSQ9UNS1 1208 aa19.67■□□□□ 0.74
RFTN1-207ENST00000453536 RGPD3A6NKT7 1758 aaPredicted RBP19.67■□□□□ 0.74
RFTN1-207ENST00000453536 RGPD4Q7Z3J3 1758 aa19.67■□□□□ 0.74
RFTN1-207ENST00000453536 MEGF6O75095 1541 aa19.66■□□□□ 0.74
RFTN1-207ENST00000453536 MAP2P11137 1827 aaKnown RBP19.66■□□□□ 0.74
RFTN1-207ENST00000453536 DOT1LQ8TEK3 1739 aa19.65■□□□□ 0.74
RFTN1-207ENST00000453536 ANKRD26Q9UPS8 1709 aa19.65■□□□□ 0.74
RFTN1-207ENST00000453536 ANO8Q9HCE9 1232 aaPredicted RBP19.64■□□□□ 0.73
RFTN1-207ENST00000453536 EXOC5O00471 708 aa19.63■□□□□ 0.73
RFTN1-207ENST00000453536 IL2RBP14784 551 aa19.63■□□□□ 0.73
RFTN1-207ENST00000453536 AMPHP49418 695 aa19.63■□□□□ 0.73
RFTN1-207ENST00000453536 EMILIN1Q9Y6C2 1016 aa19.63■□□□□ 0.73
RFTN1-207ENST00000453536 HSP90AB2PQ58FF8 381 aa19.62■□□□□ 0.73
RFTN1-207ENST00000453536 PROM2Q8N271 834 aa19.62■□□□□ 0.73
RFTN1-207ENST00000453536 PDGFDQ9GZP0 370 aaPredicted RBP19.61■□□□□ 0.73
RFTN1-207ENST00000453536 NBPF6Q5VWK0 638 aa19.6■□□□□ 0.73
RFTN1-207ENST00000453536 NBPF4Q96M43 638 aa19.6■□□□□ 0.73
RFTN1-207ENST00000453536 CDCA7Q9BWT1 371 aaPredicted RBP19.6■□□□□ 0.73
RFTN1-207ENST00000453536 CASZ1Q86V15 1759 aa19.6■□□□□ 0.73
RFTN1-207ENST00000453536 BCL11BQ9C0K0 894 aaPredicted RBP19.59■□□□□ 0.73
RFTN1-207ENST00000453536 BCL9O00512 1426 aa19.59■□□□□ 0.73
RFTN1-207ENST00000453536 EIF4G2P78344 907 aaKnown RBP eCLIP19.58■□□□□ 0.72
RFTN1-207ENST00000453536 RTL1A6NKG5 1358 aa19.57■□□□□ 0.72
RFTN1-207ENST00000453536 PARD3Q8TEW0 1356 aa19.57■□□□□ 0.72
RFTN1-207ENST00000453536 CDCA8Q53HL2 280 aa19.57■□□□□ 0.72
RFTN1-207ENST00000453536 DDX54Q8TDD1 881 aaKnown RBP19.57■□□□□ 0.72
RFTN1-207ENST00000453536 TOGARAM1Q9Y4F4 1720 aa19.56■□□□□ 0.72
RFTN1-207ENST00000453536 SLC24A1O60721 1099 aa19.56■□□□□ 0.72
RFTN1-207ENST00000453536 TNNT2P45379 298 aaPredicted RBP19.56■□□□□ 0.72
RFTN1-207ENST00000453536 PAPPAQ13219 1627 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms