RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ADAMTS8Q9UP79 889 aa20.9■□□□□ 0.94
SNX17-204ENST00000453453 RTL1A6NKG5 1358 aa20.9■□□□□ 0.94
SNX17-204ENST00000453453 BLMP54132 1417 aaPredicted RBP20.89■□□□□ 0.94
SNX17-204ENST00000453453 PHLPP1O60346 1717 aa20.89■□□□□ 0.93
SNX17-204ENST00000453453 CRYBG1Q9Y4K1 1723 aa20.89■□□□□ 0.93
SNX17-204ENST00000453453 GCP02774 474 aa20.89■□□□□ 0.93
SNX17-204ENST00000453453 PLEKHG5O94827 1062 aa20.88■□□□□ 0.93
SNX17-204ENST00000453453 ILDR1Q86SU0 546 aaPredicted RBP20.88■□□□□ 0.93
SNX17-204ENST00000453453 U2SURPO15042 1029 aaKnown RBP20.87■□□□□ 0.93
SNX17-204ENST00000453453 PIP4K2BP78356 416 aa20.87■□□□□ 0.93
SNX17-204ENST00000453453 U2AF1L5P0DN76 240 aaPredicted RBP20.86■□□□□ 0.93
SNX17-204ENST00000453453 U2AF1Q01081 240 aaKnown RBP eCLIP20.86■□□□□ 0.93
SNX17-204ENST00000453453 LRRC59Q96AG4 307 aaKnown RBP20.86■□□□□ 0.93
SNX17-204ENST00000453453 ZBTB7CA1YPR0 619 aa20.84■□□□□ 0.93
SNX17-204ENST00000453453 PNNQ9H307 717 aaKnown RBP20.84■□□□□ 0.93
SNX17-204ENST00000453453 ABCA3Q99758 1704 aa20.84■□□□□ 0.93
SNX17-204ENST00000453453 HOXC9P31274 260 aa20.83■□□□□ 0.93
SNX17-204ENST00000453453 IL13P35225 146 aa20.82■□□□□ 0.92
SNX17-204ENST00000453453 HAP1P54257 671 aaPredicted RBP20.82■□□□□ 0.92
SNX17-204ENST00000453453 HSP90AB2PQ58FF8 381 aa20.82■□□□□ 0.92
SNX17-204ENST00000453453 ARHGEF25Q86VW2 580 aa20.82■□□□□ 0.92
SNX17-204ENST00000453453 IP6K1Q92551 441 aa20.82■□□□□ 0.92
SNX17-204ENST00000453453 COL16A1Q07092 1604 aaPredicted RBP20.81■□□□□ 0.92
SNX17-204ENST00000453453 EIF4A2Q14240 407 aaKnown RBP20.81■□□□□ 0.92
SNX17-204ENST00000453453 ABCC6O95255 1503 aa20.8■□□□□ 0.92
SNX17-204ENST00000453453 CABLES1Q8TDN4 633 aa20.8■□□□□ 0.92
SNX17-204ENST00000453453 COL22A1Q8NFW1 1626 aaPredicted RBP20.8■□□□□ 0.92
SNX17-204ENST00000453453 ZC3H6P61129 1189 aaKnown RBP20.79■□□□□ 0.92
SNX17-204ENST00000453453 CCDC146Q8IYE0 955 aa20.79■□□□□ 0.92
SNX17-204ENST00000453453 RUNDC1Q96C34 613 aa20.79■□□□□ 0.92
SNX17-204ENST00000453453 NEFMP07197 916 aa20.78■□□□□ 0.92
SNX17-204ENST00000453453 RGPD1P0DJD0 1748 aa20.78■□□□□ 0.92
SNX17-204ENST00000453453 CPDO75976 1380 aa20.77■□□□□ 0.92
SNX17-204ENST00000453453 MAPK8IP3Q9UPT6 1336 aa20.77■□□□□ 0.92
SNX17-204ENST00000453453 FCHSD2O94868 740 aa20.77■□□□□ 0.92
SNX17-204ENST00000453453 FBXO41Q8TF61 875 aa20.76■□□□□ 0.91
SNX17-204ENST00000453453 NGEFQ8N5V2 710 aa20.75■□□□□ 0.91
SNX17-204ENST00000453453 RGPD5Q99666 1765 aa20.75■□□□□ 0.91
SNX17-204ENST00000453453 KIAA0232Q92628 1395 aa20.74■□□□□ 0.91
SNX17-204ENST00000453453 LTV1Q96GA3 475 aaPredicted RBP20.74■□□□□ 0.91
SNX17-204ENST00000453453 COL18A1P39060 1754 aa20.73■□□□□ 0.91
SNX17-204ENST00000453453 RNF123Q5XPI4 1314 aa20.73■□□□□ 0.91
SNX17-204ENST00000453453 HMOX1P09601 288 aa20.73■□□□□ 0.91
SNX17-204ENST00000453453 PRDM11Q9NQV5 511 aa20.73■□□□□ 0.91
SNX17-204ENST00000453453 APAF1O14727 1248 aa20.72■□□□□ 0.91
SNX17-204ENST00000453453 RSPH6AQ9H0K4 717 aa20.72■□□□□ 0.91
SNX17-204ENST00000453453 FAM208AQ9UK61 1670 aaKnown RBP20.72■□□□□ 0.91
SNX17-204ENST00000453453 PRKAR2BP31323 418 aa20.71■□□□□ 0.91
SNX17-204ENST00000453453 SULT6B1Q6IMI4 303 aa20.71■□□□□ 0.91
SNX17-204ENST00000453453 IGSF1Q8N6C5 1336 aa20.7■□□□□ 0.9
SNX17-204ENST00000453453 SENP3-EIF4A1A0A087X0R7 540 aa20.7■□□□□ 0.9
SNX17-204ENST00000453453 IRX6P78412 446 aaPredicted RBP20.7■□□□□ 0.9
SNX17-204ENST00000453453 TCP11L2Q8N4U5 519 aa20.7■□□□□ 0.9
SNX17-204ENST00000453453 ANKRD24Q8TF21 1146 aa20.7■□□□□ 0.9
SNX17-204ENST00000453453 PLEKHF1Q96S99 279 aa20.7■□□□□ 0.9
SNX17-204ENST00000453453 SALL2Q9Y467 1007 aaPredicted RBP20.7■□□□□ 0.9
SNX17-204ENST00000453453 EYA1Q99502 592 aa20.69■□□□□ 0.9
SNX17-204ENST00000453453 CHRNA2Q15822 529 aa20.68■□□□□ 0.9
SNX17-204ENST00000453453 RGPD2P0DJD1 1756 aa20.68■□□□□ 0.9
SNX17-204ENST00000453453 LMO7Q8WWI1 1683 aa20.67■□□□□ 0.9
SNX17-204ENST00000453453 KDRP35968 1356 aa20.67■□□□□ 0.9
SNX17-204ENST00000453453 COL14A1Q05707 1796 aaKnown RBP20.67■□□□□ 0.9
SNX17-204ENST00000453453 NCBP3Q53F19 620 aaKnown RBP20.67■□□□□ 0.9
SNX17-204ENST00000453453 AXIN2Q9Y2T1 843 aa20.67■□□□□ 0.9
SNX17-204ENST00000453453 ERBB3P21860 1342 aa20.66■□□□□ 0.9
SNX17-204ENST00000453453 AEBP1Q8IUX7 1158 aa20.66■□□□□ 0.9
SNX17-204ENST00000453453 NOP58Q9Y2X3 529 aaKnown RBP20.66■□□□□ 0.9
SNX17-204ENST00000453453 CAMTA1Q9Y6Y1 1673 aa20.66■□□□□ 0.9
SNX17-204ENST00000453453 JCADQ9P266 1359 aa20.66■□□□□ 0.9
SNX17-204ENST00000453453 CSB-PGBD3P0DP91 1061 aa20.65■□□□□ 0.9
SNX17-204ENST00000453453 PDE3BQ13370 1112 aa20.65■□□□□ 0.9
SNX17-204ENST00000453453 NEUROD2Q15784 382 aa20.64■□□□□ 0.89
SNX17-204ENST00000453453 TMPOP42166 694 aaKnown RBP20.63■□□□□ 0.89
SNX17-204ENST00000453453 NBPF6Q5VWK0 638 aa20.63■□□□□ 0.89
SNX17-204ENST00000453453 NBPF4Q96M43 638 aa20.63■□□□□ 0.89
SNX17-204ENST00000453453 RRP7AQ9Y3A4 280 aaKnown RBP20.63■□□□□ 0.89
SNX17-204ENST00000453453 NFE2L2Q16236 605 aa20.62■□□□□ 0.89
SNX17-204ENST00000453453 CCDC27Q2M243 656 aa20.61■□□□□ 0.89
SNX17-204ENST00000453453 NLRP2Q9NX02 1062 aa20.61■□□□□ 0.89
SNX17-204ENST00000453453 COL5A2P05997 1499 aaPredicted RBP20.6■□□□□ 0.89
SNX17-204ENST00000453453 NCAPD2Q15021 1401 aa20.6■□□□□ 0.89
SNX17-204ENST00000453453 USHBP1Q8N6Y0 703 aa20.6■□□□□ 0.89
SNX17-204ENST00000453453 PHACTR3Q96KR7 559 aa20.6■□□□□ 0.89
SNX17-204ENST00000453453 DLG5Q8TDM6 1919 aa20.6■□□□□ 0.89
SNX17-204ENST00000453453 RIPK4P57078 832 aa20.6■□□□□ 0.89
SNX17-204ENST00000453453 FAM83GA6ND36 823 aa20.59■□□□□ 0.89
SNX17-204ENST00000453453 NUTM2BA6NNL0 878 aaPredicted RBP20.59■□□□□ 0.89
SNX17-204ENST00000453453 NUTM2EB1AL46 878 aaPredicted RBP20.59■□□□□ 0.89
SNX17-204ENST00000453453 LMOD3Q0VAK6 560 aa20.59■□□□□ 0.89
SNX17-204ENST00000453453 B4GALNT3Q6L9W6 998 aa20.59■□□□□ 0.89
SNX17-204ENST00000453453 NUTM2AQ8IVF1 878 aaPredicted RBP20.59■□□□□ 0.89
SNX17-204ENST00000453453 WDR17Q8IZU2 1322 aa20.58■□□□□ 0.89
SNX17-204ENST00000453453 ZNF521Q96K83 1311 aa20.58■□□□□ 0.89
SNX17-204ENST00000453453 PLCH1Q4KWH8 1693 aa20.58■□□□□ 0.89
SNX17-204ENST00000453453 EVA1CP58658 441 aa20.58■□□□□ 0.89
SNX17-204ENST00000453453 GOLGA2Q08379 1002 aa20.58■□□□□ 0.89
SNX17-204ENST00000453453 WWC1Q8IX03 1113 aa20.58■□□□□ 0.89
SNX17-204ENST00000453453 DEKP35659 375 aaKnown RBP20.57■□□□□ 0.88
SNX17-204ENST00000453453 SPATA31A6Q5VVP1 1343 aa20.57■□□□□ 0.88
SNX17-204ENST00000453453 ADAMTS2O95450 1211 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms