RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 CLTCQ00610 1675 aaKnown RBP13.6□□□□□ -0.23
CHL1-208ENST00000453040 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
CHL1-208ENST00000453040 PLEKHF1Q96S99 279 aa13.6□□□□□ -0.23
CHL1-208ENST00000453040 SPDYE4A6NLX3 237 aa13.6□□□□□ -0.23
CHL1-208ENST00000453040 SIGLEC1Q9BZZ2 1709 aa13.59□□□□□ -0.23
CHL1-208ENST00000453040 TPRNQ4KMQ1 711 aa13.59□□□□□ -0.23
CHL1-208ENST00000453040 CYP2E1P05181 493 aaPredicted RBP13.59□□□□□ -0.23
CHL1-208ENST00000453040 NASPP49321 788 aaPredicted RBP13.57□□□□□ -0.24
CHL1-208ENST00000453040 FANCAO15360 1455 aa13.57□□□□□ -0.24
CHL1-208ENST00000453040 PIK3R4Q99570 1358 aa13.57□□□□□ -0.24
CHL1-208ENST00000453040 U2AF2P26368 475 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHL1-208ENST00000453040 ZNF445P59923 1031 aa13.57□□□□□ -0.24
CHL1-208ENST00000453040 IRX3P78415 501 aaPredicted RBP13.57□□□□□ -0.24
CHL1-208ENST00000453040 BCL2L12Q9HB09 334 aa13.57□□□□□ -0.24
CHL1-208ENST00000453040 ZBTB40Q9NUA8 1239 aa13.56□□□□□ -0.24
CHL1-208ENST00000453040 NSD3Q9BZ95 1437 aa13.56□□□□□ -0.24
CHL1-208ENST00000453040 KIDINS220Q9ULH0 1771 aa13.56□□□□□ -0.24
CHL1-208ENST00000453040 TCP11L2Q8N4U5 519 aa13.56□□□□□ -0.24
CHL1-208ENST00000453040 RUNDC1Q96C34 613 aa13.56□□□□□ -0.24
CHL1-208ENST00000453040 CD163L1Q9NR16 1453 aa13.56□□□□□ -0.24
CHL1-208ENST00000453040 CAMSAP1Q5T5Y3 1602 aa13.56□□□□□ -0.24
CHL1-208ENST00000453040 PPIP5K1Q6PFW1 1433 aa13.55□□□□□ -0.24
CHL1-208ENST00000453040 GLI2P10070 1586 aa13.55□□□□□ -0.24
CHL1-208ENST00000453040 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
CHL1-208ENST00000453040 TRIM27P14373 513 aa13.55□□□□□ -0.24
CHL1-208ENST00000453040 EP400NLQ6ZTU2 488 aa13.55□□□□□ -0.24
CHL1-208ENST00000453040 TRIM44Q96DX7 344 aaPredicted RBP13.55□□□□□ -0.24
CHL1-208ENST00000453040 CIZ1Q9ULV3 898 aaPredicted RBP13.55□□□□□ -0.24
CHL1-208ENST00000453040 TRIM35Q9UPQ4 493 aa13.55□□□□□ -0.24
CHL1-208ENST00000453040 ADGRF5Q8IZF2 1346 aa13.54□□□□□ -0.24
CHL1-208ENST00000453040 DLG5Q8TDM6 1919 aa13.54□□□□□ -0.24
CHL1-208ENST00000453040 DDX11L8A8MPP1 907 aa13.54□□□□□ -0.24
CHL1-208ENST00000453040 NUCB1Q02818 461 aa13.54□□□□□ -0.24
CHL1-208ENST00000453040 NOP2P46087 812 aaKnown RBP13.54□□□□□ -0.24
CHL1-208ENST00000453040 CTIFO43310 598 aaKnown RBP13.54□□□□□ -0.24
CHL1-208ENST00000453040 CDCA8Q53HL2 280 aa13.54□□□□□ -0.24
CHL1-208ENST00000453040 CHMP7Q8WUX9 453 aaPredicted RBP13.53□□□□□ -0.24
CHL1-208ENST00000453040 TAF3Q5VWG9 929 aa13.53□□□□□ -0.24
CHL1-208ENST00000453040 ATP7AQ04656 1500 aa13.52□□□□□ -0.24
CHL1-208ENST00000453040 NCLP19338 710 aaKnown RBP13.52□□□□□ -0.24
CHL1-208ENST00000453040 RWDD1Q9H446 243 aaPredicted RBP13.52□□□□□ -0.25
CHL1-208ENST00000453040 KIF20BQ96Q89 1820 aa13.52□□□□□ -0.25
CHL1-208ENST00000453040 KCNJ4P48050 445 aa13.51□□□□□ -0.25
CHL1-208ENST00000453040 FEZ2Q9UHY8 353 aaPredicted RBP13.51□□□□□ -0.25
CHL1-208ENST00000453040 HMGN5P82970 282 aaKnown RBP13.51□□□□□ -0.25
CHL1-208ENST00000453040 UHRF1BP1LA0JNW5 1464 aa13.51□□□□□ -0.25
CHL1-208ENST00000453040 BRPF1P55201 1214 aaPredicted RBP13.51□□□□□ -0.25
CHL1-208ENST00000453040 CNPY4Q8N129 248 aa13.51□□□□□ -0.25
CHL1-208ENST00000453040 YY1AP1Q9H869 796 aa13.51□□□□□ -0.25
CHL1-208ENST00000453040 GEMIN8Q9NWZ8 242 aaKnown RBP13.51□□□□□ -0.25
CHL1-208ENST00000453040 FRMPD1Q5SYB0 1578 aa13.5□□□□□ -0.25
CHL1-208ENST00000453040 BCL2L13Q9BXK5 485 aa13.5□□□□□ -0.25
CHL1-208ENST00000453040 CT47B1P0C2W7 299 aaPredicted RBP13.5□□□□□ -0.25
CHL1-208ENST00000453040 SAFB2Q14151 953 aaKnown RBP eCLIP13.5□□□□□ -0.25
CHL1-208ENST00000453040 RRP7AQ9Y3A4 280 aaKnown RBP13.5□□□□□ -0.25
CHL1-208ENST00000453040 PTCH1Q13635 1447 aa13.49□□□□□ -0.25
CHL1-208ENST00000453040 CFAP70Q5T0N1 1121 aa13.49□□□□□ -0.25
CHL1-208ENST00000453040 PRIM1P49642 420 aaKnown RBP13.49□□□□□ -0.25
CHL1-208ENST00000453040 C14orf37Q86TY3 774 aa13.49□□□□□ -0.25
CHL1-208ENST00000453040 SPTLC3Q9NUV7 552 aa13.49□□□□□ -0.25
CHL1-208ENST00000453040 CTNNA3Q9UI47 895 aa13.49□□□□□ -0.25
CHL1-208ENST00000453040 PNPLA6Q8IY17 1366 aa13.49□□□□□ -0.25
CHL1-208ENST00000453040 SIRT2Q8IXJ6 389 aa13.49□□□□□ -0.25
CHL1-208ENST00000453040 NSFL1CQ9UNZ2 370 aaKnown RBP13.49□□□□□ -0.25
CHL1-208ENST00000453040 C17orf53Q8N3J3 647 aaPredicted RBP13.48□□□□□ -0.25
CHL1-208ENST00000453040 LRRC7Q96NW7 1537 aa13.48□□□□□ -0.25
CHL1-208ENST00000453040 GAS2L2Q8NHY3 880 aa13.48□□□□□ -0.25
CHL1-208ENST00000453040 TAOK2Q9UL54 1235 aa13.48□□□□□ -0.25
CHL1-208ENST00000453040 MFAP1P55081 439 aaKnown RBP13.48□□□□□ -0.25
CHL1-208ENST00000453040 ESF1Q9H501 851 aaKnown RBP13.48□□□□□ -0.25
CHL1-208ENST00000453040 ZNF446Q9NWS9 450 aa13.48□□□□□ -0.25
CHL1-208ENST00000453040 NEXMIFQ5QGS0 1516 aa13.48□□□□□ -0.25
CHL1-208ENST00000453040 PREX1Q8TCU6 1659 aa13.48□□□□□ -0.25
CHL1-208ENST00000453040 TMED8Q6PL24 325 aaPredicted RBP13.47□□□□□ -0.25
CHL1-208ENST00000453040 ATG3Q9NT62 314 aa13.47□□□□□ -0.25
CHL1-208ENST00000453040 TERF2Q15554 542 aa13.47□□□□□ -0.25
CHL1-208ENST00000453040 KLHL40Q2TBA0 621 aa13.47□□□□□ -0.25
CHL1-208ENST00000453040 BMP2KLQ5H9B9 411 aa13.47□□□□□ -0.25
CHL1-208ENST00000453040 GPT2Q8TD30 523 aa13.47□□□□□ -0.25
CHL1-208ENST00000453040 SSH1Q8WYL5 1049 aa13.47□□□□□ -0.25
CHL1-208ENST00000453040 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.47□□□□□ -0.25
CHL1-208ENST00000453040 DZIP1LQ8IYY4 767 aaKnown RBP13.47□□□□□ -0.25
CHL1-208ENST00000453040 ERBB3P21860 1342 aa13.47□□□□□ -0.25
CHL1-208ENST00000453040 ZDHHC9Q9Y397 364 aa13.47□□□□□ -0.25
CHL1-208ENST00000453040 ABCC11Q96J66 1382 aa13.46□□□□□ -0.25
CHL1-208ENST00000453040 MCM5P33992 734 aa13.46□□□□□ -0.25
CHL1-208ENST00000453040 ZSCAN23Q3MJ62 389 aa13.46□□□□□ -0.25
CHL1-208ENST00000453040 RBM42Q9BTD8 480 aaKnown RBP13.46□□□□□ -0.25
CHL1-208ENST00000453040 MSNP26038 577 aaKnown RBP13.46□□□□□ -0.25
CHL1-208ENST00000453040 LMBRD1Q9NUN5 540 aa13.46□□□□□ -0.25
CHL1-208ENST00000453040 DNAJC2Q99543 621 aaKnown RBP13.46□□□□□ -0.26
CHL1-208ENST00000453040 ABCC3O15438 1527 aa13.45□□□□□ -0.26
CHL1-208ENST00000453040 CT47A1Q5JQC4 288 aaPredicted RBP13.45□□□□□ -0.26
CHL1-208ENST00000453040 CARD10Q9BWT7 1032 aa13.45□□□□□ -0.26
CHL1-208ENST00000453040 LOC102724159A0A0B4J2E5 919 aa13.45□□□□□ -0.26
CHL1-208ENST00000453040 SSFA2P28290 1259 aa13.45□□□□□ -0.26
CHL1-208ENST00000453040 PWP2Q15269 919 aaKnown RBP13.45□□□□□ -0.26
CHL1-208ENST00000453040 ZKSCAN2Q63HK3 967 aa13.45□□□□□ -0.26
CHL1-208ENST00000453040 HECW2Q9P2P5 1572 aa13.45□□□□□ -0.26
CHL1-208ENST00000453040 FKBP5Q13451 457 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms