RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 COL3A1P02461 1466 aaPredicted RBP21.25■□□□□ 0.99
SCUBE2-202ENST00000450649 UQCRHLA0A096LP55 91 aa21.25■□□□□ 0.99
SCUBE2-202ENST00000450649 UQCRHP07919 91 aa21.25■□□□□ 0.99
SCUBE2-202ENST00000450649 PDLIM2Q96JY6 352 aa21.25■□□□□ 0.99
SCUBE2-202ENST00000450649 IPO8O15397 1037 aaKnown RBP21.24■□□□□ 0.99
SCUBE2-202ENST00000450649 ARHGAP31Q2M1Z3 1444 aa21.24■□□□□ 0.99
SCUBE2-202ENST00000450649 U2SURPO15042 1029 aaKnown RBP21.24■□□□□ 0.99
SCUBE2-202ENST00000450649 KIF16BQ96L93 1317 aa21.24■□□□□ 0.99
SCUBE2-202ENST00000450649 AK9Q5TCS8 1911 aa21.23■□□□□ 0.99
SCUBE2-202ENST00000450649 NUTM2DQ5VT03 806 aaPredicted RBP21.22■□□□□ 0.99
SCUBE2-202ENST00000450649 LMBRD1Q9NUN5 540 aa21.22■□□□□ 0.99
SCUBE2-202ENST00000450649 ZFYVE9O95405 1425 aa21.22■□□□□ 0.99
SCUBE2-202ENST00000450649 SIGLEC1Q9BZZ2 1709 aa21.22■□□□□ 0.99
SCUBE2-202ENST00000450649 MED14O60244 1454 aa21.21■□□□□ 0.99
SCUBE2-202ENST00000450649 PRIM1P49642 420 aaKnown RBP21.21■□□□□ 0.99
SCUBE2-202ENST00000450649 GGNBP2Q9H3C7 697 aa21.21■□□□□ 0.99
SCUBE2-202ENST00000450649 ZKSCAN5Q9Y2L8 839 aa21.2■□□□□ 0.98
SCUBE2-202ENST00000450649 NUCB2P80303 420 aa21.19■□□□□ 0.98
SCUBE2-202ENST00000450649 GCC1Q96CN9 775 aa21.19■□□□□ 0.98
SCUBE2-202ENST00000450649 SRPK2P78362 688 aaKnown RBP21.19■□□□□ 0.98
SCUBE2-202ENST00000450649 ATAD2Q6PL18 1390 aa21.19■□□□□ 0.98
SCUBE2-202ENST00000450649 SAFB2Q14151 953 aaKnown RBP eCLIP21.18■□□□□ 0.98
SCUBE2-202ENST00000450649 PPIP5K1Q6PFW1 1433 aa21.18■□□□□ 0.98
SCUBE2-202ENST00000450649 FYB1O15117 783 aa21.18■□□□□ 0.98
SCUBE2-202ENST00000450649 TERF2IPQ9NYB0 399 aa21.18■□□□□ 0.98
SCUBE2-202ENST00000450649 DYNC1I1O14576 645 aa21.17■□□□□ 0.98
SCUBE2-202ENST00000450649 CYP2E1P05181 493 aaPredicted RBP21.17■□□□□ 0.98
SCUBE2-202ENST00000450649 CSPP1Q1MSJ5 1256 aa21.17■□□□□ 0.98
SCUBE2-202ENST00000450649 NPM1P06748 294 aaKnown RBP eCLIP21.17■□□□□ 0.98
SCUBE2-202ENST00000450649 PKP1Q13835 747 aa21.17■□□□□ 0.98
SCUBE2-202ENST00000450649 ARID3AQ99856 593 aa21.17■□□□□ 0.98
SCUBE2-202ENST00000450649 CDC45O75419 566 aa21.16■□□□□ 0.98
SCUBE2-202ENST00000450649 C1orf115Q9H7X2 142 aa21.16■□□□□ 0.98
SCUBE2-202ENST00000450649 MTERF4Q7Z6M4 381 aaKnown RBP21.16■□□□□ 0.98
SCUBE2-202ENST00000450649 RBM27Q9P2N5 1060 aaKnown RBP21.16■□□□□ 0.98
SCUBE2-202ENST00000450649 PNPLA6Q8IY17 1366 aa21.16■□□□□ 0.98
SCUBE2-202ENST00000450649 RABEP1Q15276 862 aa21.15■□□□□ 0.98
SCUBE2-202ENST00000450649 ANKRD26Q9UPS8 1709 aa21.15■□□□□ 0.98
SCUBE2-202ENST00000450649 IDI1Q13907 227 aa21.15■□□□□ 0.98
SCUBE2-202ENST00000450649 ALDH1L2Q3SY69 923 aa21.15■□□□□ 0.98
SCUBE2-202ENST00000450649 ZBTB7BO15156 539 aaPredicted RBP21.15■□□□□ 0.98
SCUBE2-202ENST00000450649 DIAPH1O60610 1272 aaKnown RBP21.15■□□□□ 0.98
SCUBE2-202ENST00000450649 PRPF40AO75400 957 aaKnown RBP21.15■□□□□ 0.98
SCUBE2-202ENST00000450649 SMAP1Q8IYB5 467 aaPredicted RBP21.15■□□□□ 0.98
SCUBE2-202ENST00000450649 MCM5P33992 734 aa21.14■□□□□ 0.97
SCUBE2-202ENST00000450649 CD163L1Q9NR16 1453 aa21.14■□□□□ 0.97
SCUBE2-202ENST00000450649 GPT2Q8TD30 523 aa21.14■□□□□ 0.97
SCUBE2-202ENST00000450649 SLC52A1Q9NWF4 448 aa21.14■□□□□ 0.97
SCUBE2-202ENST00000450649 PODXL2Q9NZ53 605 aa21.14■□□□□ 0.97
SCUBE2-202ENST00000450649 STK26Q9P289 416 aa21.14■□□□□ 0.97
SCUBE2-202ENST00000450649 PTPRMP28827 1452 aa21.13■□□□□ 0.97
SCUBE2-202ENST00000450649 SASS6Q6UVJ0 657 aa21.12■□□□□ 0.97
SCUBE2-202ENST00000450649 CCDC39Q9UFE4 941 aa21.11■□□□□ 0.97
SCUBE2-202ENST00000450649 BRPF1P55201 1214 aaPredicted RBP21.11■□□□□ 0.97
SCUBE2-202ENST00000450649 ZNF428Q96B54 188 aa21.11■□□□□ 0.97
SCUBE2-202ENST00000450649 SIRT2Q8IXJ6 389 aa21.11■□□□□ 0.97
SCUBE2-202ENST00000450649 CLTCQ00610 1675 aaKnown RBP21.11■□□□□ 0.97
SCUBE2-202ENST00000450649 FCHSD2O94868 740 aa21.1■□□□□ 0.97
SCUBE2-202ENST00000450649 GSPT1P15170 499 aaKnown RBP21.1■□□□□ 0.97
SCUBE2-202ENST00000450649 LRSAM1Q6UWE0 723 aa21.1■□□□□ 0.97
SCUBE2-202ENST00000450649 MINK1Q8N4C8 1332 aaPredicted RBP21.09■□□□□ 0.97
SCUBE2-202ENST00000450649 HDGFL2Q7Z4V5 671 aaPredicted RBP21.09■□□□□ 0.97
SCUBE2-202ENST00000450649 CWC22Q9HCG8 908 aaKnown RBP21.09■□□□□ 0.97
SCUBE2-202ENST00000450649 TMEM63CQ9P1W3 806 aa21.09■□□□□ 0.97
SCUBE2-202ENST00000450649 SYCE3A1L190 88 aa21.08■□□□□ 0.97
SCUBE2-202ENST00000450649 PRAM1Q96QH2 718 aa21.08■□□□□ 0.97
SCUBE2-202ENST00000450649 CDC42BPGQ6DT37 1551 aa21.08■□□□□ 0.97
SCUBE2-202ENST00000450649 ZGPATQ8N5A5 531 aaKnown RBP21.08■□□□□ 0.97
SCUBE2-202ENST00000450649 CHMP4BQ9H444 224 aaKnown RBP21.08■□□□□ 0.97
SCUBE2-202ENST00000450649 NEO1Q92859 1461 aa21.07■□□□□ 0.96
SCUBE2-202ENST00000450649 DIP2CQ9Y2E4 1556 aa21.07■□□□□ 0.96
SCUBE2-202ENST00000450649 YTHDC2Q9H6S0 1430 aaKnown RBP21.07■□□□□ 0.96
SCUBE2-202ENST00000450649 USP26Q9BXU7 913 aa21.07■□□□□ 0.96
SCUBE2-202ENST00000450649 ZDHHC9Q9Y397 364 aa21.07■□□□□ 0.96
SCUBE2-202ENST00000450649 RAPGEF3O95398 923 aa21.06■□□□□ 0.96
SCUBE2-202ENST00000450649 PRDM10Q9NQV6 1147 aa21.06■□□□□ 0.96
SCUBE2-202ENST00000450649 CHAMP1Q96JM3 812 aa21.06■□□□□ 0.96
SCUBE2-202ENST00000450649 NSFL1CQ9UNZ2 370 aaKnown RBP21.05■□□□□ 0.96
SCUBE2-202ENST00000450649 PLEKHM2Q8IWE5 1019 aa21.05■□□□□ 0.96
SCUBE2-202ENST00000450649 REREQ9P2R6 1566 aa21.05■□□□□ 0.96
SCUBE2-202ENST00000450649 FAM135BQ49AJ0 1406 aa21.05■□□□□ 0.96
SCUBE2-202ENST00000450649 RNF214Q8ND24 703 aa21.04■□□□□ 0.96
SCUBE2-202ENST00000450649 LRRC7Q96NW7 1537 aa21.04■□□□□ 0.96
SCUBE2-202ENST00000450649 ARHGAP45Q92619 1136 aa21.04■□□□□ 0.96
SCUBE2-202ENST00000450649 TMEM131LA2VDJ0 1609 aa21.03■□□□□ 0.96
SCUBE2-202ENST00000450649 ARHGEF40Q8TER5 1519 aa21.03■□□□□ 0.96
SCUBE2-202ENST00000450649 CCDC94Q9BW85 323 aaPredicted RBP21.03■□□□□ 0.96
SCUBE2-202ENST00000450649 PRKAR2BP31323 418 aa21.02■□□□□ 0.96
SCUBE2-202ENST00000450649 MRPL50Q8N5N7 158 aaKnown RBP21.02■□□□□ 0.96
SCUBE2-202ENST00000450649 CDK19Q9BWU1 502 aa21.02■□□□□ 0.96
SCUBE2-202ENST00000450649 PIK3R4Q99570 1358 aa21.02■□□□□ 0.96
SCUBE2-202ENST00000450649 ST18O60284 1047 aa21.02■□□□□ 0.96
SCUBE2-202ENST00000450649 CFAP44Q96MT7 982 aa21.02■□□□□ 0.96
SCUBE2-202ENST00000450649 TTC22Q5TAA0 569 aa21.01■□□□□ 0.95
SCUBE2-202ENST00000450649 CABP1Q9NZU7 370 aa21.01■□□□□ 0.95
SCUBE2-202ENST00000450649 ZHX1Q9UKY1 873 aaPredicted RBP21.01■□□□□ 0.95
SCUBE2-202ENST00000450649 PTMAP06454 111 aaKnown RBP21.01■□□□□ 0.95
SCUBE2-202ENST00000450649 KIF20BQ96Q89 1820 aa21■□□□□ 0.95
SCUBE2-202ENST00000450649 MYO5BQ9ULV0 1848 aa21■□□□□ 0.95
SCUBE2-202ENST00000450649 PTCH1Q13635 1447 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms