RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 PHF8Q9UPP1 1060 aa12.18□□□□□ -0.46
LINC01961-201ENST00000449954 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
LINC01961-201ENST00000449954 PDE3BQ13370 1112 aa12.17□□□□□ -0.46
LINC01961-201ENST00000449954 LHX8Q68G74 356 aa12.17□□□□□ -0.46
LINC01961-201ENST00000449954 IFT172Q9UG01 1749 aa12.17□□□□□ -0.46
LINC01961-201ENST00000449954 MAP3K5Q99683 1374 aa12.17□□□□□ -0.46
LINC01961-201ENST00000449954 RPGRIP1LQ68CZ1 1315 aa12.16□□□□□ -0.46
LINC01961-201ENST00000449954 BMP2KQ9NSY1 1161 aaPredicted RBP12.16□□□□□ -0.46
LINC01961-201ENST00000449954 SHANK3Q9BYB0 1731 aa12.16□□□□□ -0.46
LINC01961-201ENST00000449954 ZBTB7AO95365 584 aa12.15□□□□□ -0.46
LINC01961-201ENST00000449954 ANO8Q9HCE9 1232 aaPredicted RBP12.15□□□□□ -0.46
LINC01961-201ENST00000449954 ALS2Q96Q42 1657 aa12.15□□□□□ -0.46
LINC01961-201ENST00000449954 PPLO60437 1756 aa12.15□□□□□ -0.46
LINC01961-201ENST00000449954 TRPM3Q9HCF6 1732 aaPredicted RBP12.14□□□□□ -0.47
LINC01961-201ENST00000449954 TIE1P35590 1138 aa12.14□□□□□ -0.47
LINC01961-201ENST00000449954 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
LINC01961-201ENST00000449954 FAM50AQ14320 339 aaKnown RBP12.14□□□□□ -0.47
LINC01961-201ENST00000449954 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
LINC01961-201ENST00000449954 ABCC11Q96J66 1382 aa12.14□□□□□ -0.47
LINC01961-201ENST00000449954 CRYBG1Q9Y4K1 1723 aa12.14□□□□□ -0.47
LINC01961-201ENST00000449954 RGPD8O14715 1765 aaPredicted RBP12.13□□□□□ -0.47
LINC01961-201ENST00000449954 PLSCR1O15162 318 aa12.13□□□□□ -0.47
LINC01961-201ENST00000449954 WAPLQ7Z5K2 1190 aa12.13□□□□□ -0.47
LINC01961-201ENST00000449954 PRDM11Q9NQV5 511 aa12.13□□□□□ -0.47
LINC01961-201ENST00000449954 MTFR1LQ9H019 292 aa12.12□□□□□ -0.47
LINC01961-201ENST00000449954 PLEKHH1Q9ULM0 1364 aa12.11□□□□□ -0.47
LINC01961-201ENST00000449954 HSPA6P17066 643 aa12.11□□□□□ -0.47
LINC01961-201ENST00000449954 PCDHB8Q9UN66 801 aa12.11□□□□□ -0.47
LINC01961-201ENST00000449954 OVOS2A0A0G2JMS6 1433 aa12.11□□□□□ -0.47
LINC01961-201ENST00000449954 OVOS2A0A0J9YW53 1432 aa12.11□□□□□ -0.47
LINC01961-201ENST00000449954 OVOS2Q6IE36 1432 aa12.11□□□□□ -0.47
LINC01961-201ENST00000449954 ANKARQ7Z5J8 1434 aa12.11□□□□□ -0.47
LINC01961-201ENST00000449954 GPR162Q16538 588 aa12.1□□□□□ -0.47
LINC01961-201ENST00000449954 SLC39A7Q92504 469 aa12.1□□□□□ -0.47
LINC01961-201ENST00000449954 PDGFDQ9GZP0 370 aaPredicted RBP12.1□□□□□ -0.47
LINC01961-201ENST00000449954 PARP4Q9UKK3 1724 aaKnown RBP12.1□□□□□ -0.47
LINC01961-201ENST00000449954 GPRASP1Q5JY77 1395 aa12.09□□□□□ -0.47
LINC01961-201ENST00000449954 TTLL13PA6NNM8 815 aa12.09□□□□□ -0.47
LINC01961-201ENST00000449954 CHRM1P11229 460 aaPredicted RBP12.09□□□□□ -0.47
LINC01961-201ENST00000449954 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
LINC01961-201ENST00000449954 STK26Q9P289 416 aa12.09□□□□□ -0.47
LINC01961-201ENST00000449954 C7P10643 843 aa12.08□□□□□ -0.48
LINC01961-201ENST00000449954 ARXQ96QS3 562 aa12.08□□□□□ -0.48
LINC01961-201ENST00000449954 STRN4Q9NRL3 753 aa12.08□□□□□ -0.48
LINC01961-201ENST00000449954 METRNQ9UJH8 293 aa12.08□□□□□ -0.48
LINC01961-201ENST00000449954 SSH2Q76I76 1423 aa12.08□□□□□ -0.48
LINC01961-201ENST00000449954 PEAK1Q9H792 1746 aa12.08□□□□□ -0.48
LINC01961-201ENST00000449954 KIAA0232Q92628 1395 aa12.07□□□□□ -0.48
LINC01961-201ENST00000449954 TMEM106CQ9BVX2 250 aa12.07□□□□□ -0.48
LINC01961-201ENST00000449954 STK32BQ9NY57 414 aa12.07□□□□□ -0.48
LINC01961-201ENST00000449954 USP35Q9P2H5 1018 aa12.07□□□□□ -0.48
LINC01961-201ENST00000449954 TCP11L2Q8N4U5 519 aa12.06□□□□□ -0.48
LINC01961-201ENST00000449954 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
LINC01961-201ENST00000449954 THRAP3Q9Y2W1 955 aaKnown RBP12.06□□□□□ -0.48
LINC01961-201ENST00000449954 PHRF1Q9P1Y6 1649 aaKnown RBP12.06□□□□□ -0.48
LINC01961-201ENST00000449954 YTHDC2Q9H6S0 1430 aaKnown RBP12.05□□□□□ -0.48
LINC01961-201ENST00000449954 SBF2Q86WG5 1849 aa12.05□□□□□ -0.48
LINC01961-201ENST00000449954 ZNF467Q7Z7K2 595 aaPredicted RBP12.05□□□□□ -0.48
LINC01961-201ENST00000449954 DHX57Q6P158 1386 aaKnown RBP12.05□□□□□ -0.48
LINC01961-201ENST00000449954 SLC15A2Q16348 729 aa12.04□□□□□ -0.48
LINC01961-201ENST00000449954 PMFBP1Q8TBY8 1022 aa12.04□□□□□ -0.48
LINC01961-201ENST00000449954 ACIN1Q9UKV3 1341 aaKnown RBP12.04□□□□□ -0.48
LINC01961-201ENST00000449954 ATP10DQ9P241 1426 aa12.03□□□□□ -0.48
LINC01961-201ENST00000449954 ATP7BP35670 1465 aa12.03□□□□□ -0.48
LINC01961-201ENST00000449954 TRIM35Q9UPQ4 493 aa12.03□□□□□ -0.48
LINC01961-201ENST00000449954 EIF3AQ14152 1382 aaKnown RBP12.03□□□□□ -0.48
LINC01961-201ENST00000449954 AATKQ6ZMQ8 1374 aa12.03□□□□□ -0.48
LINC01961-201ENST00000449954 SLC34A2O95436 690 aa12.02□□□□□ -0.49
LINC01961-201ENST00000449954 EVA1CP58658 441 aa12.02□□□□□ -0.49
LINC01961-201ENST00000449954 CHRNA2Q15822 529 aa12.02□□□□□ -0.49
LINC01961-201ENST00000449954 GPBP1L1Q9HC44 474 aaPredicted RBP12.02□□□□□ -0.49
LINC01961-201ENST00000449954 LRRC37A3O60309 1634 aa12.01□□□□□ -0.49
LINC01961-201ENST00000449954 GRIN3BO60391 1043 aa12.01□□□□□ -0.49
LINC01961-201ENST00000449954 ADGRF5Q8IZF2 1346 aa12.01□□□□□ -0.49
LINC01961-201ENST00000449954 ANKRD30BQ9BXX2 1392 aa12.01□□□□□ -0.49
LINC01961-201ENST00000449954 BCL9O00512 1426 aa12.01□□□□□ -0.49
LINC01961-201ENST00000449954 PIK3C2GO75747 1445 aa12.01□□□□□ -0.49
LINC01961-201ENST00000449954 PRELPP51888 382 aa12□□□□□ -0.49
LINC01961-201ENST00000449954 LMO7Q8WWI1 1683 aa12□□□□□ -0.49
LINC01961-201ENST00000449954 TXNRD1Q16881 649 aa11.99□□□□□ -0.49
LINC01961-201ENST00000449954 TMEM132EQ6IEE7 984 aa11.99□□□□□ -0.49
LINC01961-201ENST00000449954 LARP1Q6PKG0 1096 aaKnown RBP11.99□□□□□ -0.49
LINC01961-201ENST00000449954 TOPAZ1Q8N9V7 1692 aa11.98□□□□□ -0.49
LINC01961-201ENST00000449954 TULP4Q9NRJ4 1543 aa11.98□□□□□ -0.49
LINC01961-201ENST00000449954 POTEB2H3BUK9 544 aa11.98□□□□□ -0.49
LINC01961-201ENST00000449954 APLP1P51693 650 aa11.98□□□□□ -0.49
LINC01961-201ENST00000449954 ADCY9O60503 1353 aa11.97□□□□□ -0.49
LINC01961-201ENST00000449954 CPDO75976 1380 aa11.97□□□□□ -0.49
LINC01961-201ENST00000449954 SEC24BO95487 1268 aa11.97□□□□□ -0.49
LINC01961-201ENST00000449954 ZC3H6P61129 1189 aaKnown RBP11.97□□□□□ -0.49
LINC01961-201ENST00000449954 PAPPAQ13219 1627 aa11.97□□□□□ -0.49
LINC01961-201ENST00000449954 CRB1P82279 1406 aa11.96□□□□□ -0.49
LINC01961-201ENST00000449954 COL5A2P05997 1499 aaPredicted RBP11.95□□□□□ -0.5
LINC01961-201ENST00000449954 AKAP12Q02952 1782 aa11.95□□□□□ -0.5
LINC01961-201ENST00000449954 POLD1P28340 1107 aa11.95□□□□□ -0.5
LINC01961-201ENST00000449954 PSEN1P49768 467 aa11.95□□□□□ -0.5
LINC01961-201ENST00000449954 DDB1Q16531 1140 aa11.95□□□□□ -0.5
LINC01961-201ENST00000449954 TNS4Q8IZW8 715 aa11.95□□□□□ -0.5
LINC01961-201ENST00000449954 NGDNQ8NEJ9 315 aaKnown RBP11.95□□□□□ -0.5
LINC01961-201ENST00000449954 PRAM1Q96QH2 718 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms