RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 FAM135BQ49AJ0 1406 aa14.14□□□□□ -0.15
SYVN1-204ENST00000449943 XRCC6P12956 609 aaKnown RBP eCLIP14.13□□□□□ -0.15
SYVN1-204ENST00000449943 PPIP5K1Q6PFW1 1433 aa14.13□□□□□ -0.15
SYVN1-204ENST00000449943 CALD1Q05682 793 aaKnown RBP14.13□□□□□ -0.15
SYVN1-204ENST00000449943 ARHGEF40Q8TER5 1519 aa14.13□□□□□ -0.15
SYVN1-204ENST00000449943 TMEM131LA2VDJ0 1609 aa14.12□□□□□ -0.15
SYVN1-204ENST00000449943 ALKQ9UM73 1620 aa14.12□□□□□ -0.15
SYVN1-204ENST00000449943 PLEKHG5O94827 1062 aa14.12□□□□□ -0.15
SYVN1-204ENST00000449943 C8orf58Q8NAV2 365 aa14.12□□□□□ -0.15
SYVN1-204ENST00000449943 BMP2KLQ5H9B9 411 aa14.12□□□□□ -0.15
SYVN1-204ENST00000449943 RBM25P49756 843 aaKnown RBP14.12□□□□□ -0.15
SYVN1-204ENST00000449943 GCC1Q96CN9 775 aa14.12□□□□□ -0.15
SYVN1-204ENST00000449943 TXNDC2Q86VQ3 553 aa14.11□□□□□ -0.15
SYVN1-204ENST00000449943 RBM42Q9BTD8 480 aaKnown RBP14.11□□□□□ -0.15
SYVN1-204ENST00000449943 IFT57Q9NWB7 429 aa14.11□□□□□ -0.15
SYVN1-204ENST00000449943 TBC1D9Q6ZT07 1266 aa14.11□□□□□ -0.15
SYVN1-204ENST00000449943 RRAGDQ9NQL2 400 aaPredicted RBP14.11□□□□□ -0.15
SYVN1-204ENST00000449943 APBB1O00213 710 aa14.11□□□□□ -0.15
SYVN1-204ENST00000449943 DDX11L8A8MPP1 907 aa14.11□□□□□ -0.15
SYVN1-204ENST00000449943 IL13P35225 146 aa14.11□□□□□ -0.15
SYVN1-204ENST00000449943 SIRT2Q8IXJ6 389 aa14.11□□□□□ -0.15
SYVN1-204ENST00000449943 CHMP4BQ9H444 224 aaKnown RBP14.11□□□□□ -0.15
SYVN1-204ENST00000449943 PREX1Q8TCU6 1659 aa14.1□□□□□ -0.15
SYVN1-204ENST00000449943 ZNF428Q96B54 188 aa14.1□□□□□ -0.15
SYVN1-204ENST00000449943 COG3Q96JB2 828 aa14.1□□□□□ -0.15
SYVN1-204ENST00000449943 CD2BP2O95400 341 aaKnown RBP14.1□□□□□ -0.15
SYVN1-204ENST00000449943 TNPO1Q92973 898 aaKnown RBP14.1□□□□□ -0.15
SYVN1-204ENST00000449943 ZNF692Q9BU19 519 aaPredicted RBP14.1□□□□□ -0.15
SYVN1-204ENST00000449943 ANKRD26Q9UPS8 1709 aa14.09□□□□□ -0.15
SYVN1-204ENST00000449943 SOX12O15370 315 aa14.09□□□□□ -0.15
SYVN1-204ENST00000449943 LMOD2Q6P5Q4 547 aa14.09□□□□□ -0.15
SYVN1-204ENST00000449943 NUTM2FA1L443 756 aa14.08□□□□□ -0.16
SYVN1-204ENST00000449943 KRT24Q2M2I5 525 aa14.08□□□□□ -0.16
SYVN1-204ENST00000449943 WASLO00401 505 aaPredicted RBP14.08□□□□□ -0.16
SYVN1-204ENST00000449943 ARHGAP45Q92619 1136 aa14.08□□□□□ -0.16
SYVN1-204ENST00000449943 SNX21Q969T3 373 aa14.08□□□□□ -0.16
SYVN1-204ENST00000449943 KIF20BQ96Q89 1820 aa14.07□□□□□ -0.16
SYVN1-204ENST00000449943 FSD2A1L4K1 749 aa14.07□□□□□ -0.16
SYVN1-204ENST00000449943 CFAP44Q96MT7 982 aa14.07□□□□□ -0.16
SYVN1-204ENST00000449943 API5Q9BZZ5 524 aaKnown RBP14.07□□□□□ -0.16
SYVN1-204ENST00000449943 ABCC4O15439 1325 aa14.07□□□□□ -0.16
SYVN1-204ENST00000449943 LMOD3Q0VAK6 560 aa14.07□□□□□ -0.16
SYVN1-204ENST00000449943 NUDT16Q96DE0 195 aaKnown RBP14.07□□□□□ -0.16
SYVN1-204ENST00000449943 CLTCQ00610 1675 aaKnown RBP14.07□□□□□ -0.16
SYVN1-204ENST00000449943 BRPF1P55201 1214 aaPredicted RBP14.07□□□□□ -0.16
SYVN1-204ENST00000449943 AEBP1Q8IUX7 1158 aa14.06□□□□□ -0.16
SYVN1-204ENST00000449943 GBP4Q96PP9 640 aa14.06□□□□□ -0.16
SYVN1-204ENST00000449943 KIF2CQ99661 725 aa14.06□□□□□ -0.16
SYVN1-204ENST00000449943 HAP1P54257 671 aaPredicted RBP14.06□□□□□ -0.16
SYVN1-204ENST00000449943 PTCH1Q13635 1447 aa14.06□□□□□ -0.16
SYVN1-204ENST00000449943 RIMS2Q9UQ26 1411 aa14.06□□□□□ -0.16
SYVN1-204ENST00000449943 RICTORQ6R327 1708 aa14.06□□□□□ -0.16
SYVN1-204ENST00000449943 CDC45O75419 566 aa14.06□□□□□ -0.16
SYVN1-204ENST00000449943 ZNF853P0CG23 659 aa14.05□□□□□ -0.16
SYVN1-204ENST00000449943 C16orf71Q8IYS4 520 aaPredicted RBP14.05□□□□□ -0.16
SYVN1-204ENST00000449943 K7ELQ4 463 aaPredicted RBP14.05□□□□□ -0.16
SYVN1-204ENST00000449943 ATP7BP35670 1465 aa14.05□□□□□ -0.16
SYVN1-204ENST00000449943 SULT6B1Q6IMI4 303 aa14.05□□□□□ -0.16
SYVN1-204ENST00000449943 GSPT1P15170 499 aaKnown RBP14.04□□□□□ -0.16
SYVN1-204ENST00000449943 MCM10Q7L590 875 aa14.04□□□□□ -0.16
SYVN1-204ENST00000449943 GRPEL1Q9HAV7 217 aa14.04□□□□□ -0.16
SYVN1-204ENST00000449943 DDIT3P35638 169 aa14.04□□□□□ -0.16
SYVN1-204ENST00000449943 MRE11P49959 708 aa14.04□□□□□ -0.16
SYVN1-204ENST00000449943 EDC4Q6P2E9 1401 aaKnown RBP14.04□□□□□ -0.16
SYVN1-204ENST00000449943 CDC42BPGQ6DT37 1551 aa14.03□□□□□ -0.16
SYVN1-204ENST00000449943 NCOA3Q9Y6Q9 1424 aa14.03□□□□□ -0.16
SYVN1-204ENST00000449943 GAS2L2Q8NHY3 880 aa14.03□□□□□ -0.16
SYVN1-204ENST00000449943 SSFA2P28290 1259 aa14.03□□□□□ -0.16
SYVN1-204ENST00000449943 OTUD7AQ8TE49 926 aaPredicted RBP14.03□□□□□ -0.16
SYVN1-204ENST00000449943 PIK3R4Q99570 1358 aa14.03□□□□□ -0.16
SYVN1-204ENST00000449943 SMARCA5O60264 1052 aaPredicted RBP14.03□□□□□ -0.16
SYVN1-204ENST00000449943 RAB3GAP1Q15042 981 aa14.03□□□□□ -0.16
SYVN1-204ENST00000449943 METP08581 1390 aa14.03□□□□□ -0.16
SYVN1-204ENST00000449943 MAP2P11137 1827 aaKnown RBP14.02□□□□□ -0.16
SYVN1-204ENST00000449943 CCDC61Q9Y6R9 512 aa14.02□□□□□ -0.16
SYVN1-204ENST00000449943 PLEKHM2Q8IWE5 1019 aa14.02□□□□□ -0.16
SYVN1-204ENST00000449943 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.02□□□□□ -0.16
SYVN1-204ENST00000449943 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.17
SYVN1-204ENST00000449943 A2ML1A8K2U0 1454 aa14.01□□□□□ -0.17
SYVN1-204ENST00000449943 MIS18AQ9NYP9 233 aa14.01□□□□□ -0.17
SYVN1-204ENST00000449943 CDK12Q9NYV4 1490 aaPredicted RBP14□□□□□ -0.17
SYVN1-204ENST00000449943 CPS1P31327 1500 aa14□□□□□ -0.17
SYVN1-204ENST00000449943 CPSF1Q10570 1443 aaKnown RBP14□□□□□ -0.17
SYVN1-204ENST00000449943 EIF4A2Q14240 407 aaKnown RBP14□□□□□ -0.17
SYVN1-204ENST00000449943 SLC4A10Q6U841 1118 aa14□□□□□ -0.17
SYVN1-204ENST00000449943 NAP1L5Q96NT1 182 aaPredicted RBP14□□□□□ -0.17
SYVN1-204ENST00000449943 TTC22Q5TAA0 569 aa13.99□□□□□ -0.17
SYVN1-204ENST00000449943 DCTPP1Q9H773 170 aa13.99□□□□□ -0.17
SYVN1-204ENST00000449943 GAS2L3Q86XJ1 694 aa13.99□□□□□ -0.17
SYVN1-204ENST00000449943 MEIS3Q99687 375 aa13.98□□□□□ -0.17
SYVN1-204ENST00000449943 GOLGA6L22H0YM25 854 aa13.98□□□□□ -0.17
SYVN1-204ENST00000449943 NCLP19338 710 aaKnown RBP13.98□□□□□ -0.17
SYVN1-204ENST00000449943 AATKQ6ZMQ8 1374 aa13.98□□□□□ -0.17
SYVN1-204ENST00000449943 MSH6P52701 1360 aa13.98□□□□□ -0.17
SYVN1-204ENST00000449943 HSP90AB2PQ58FF8 381 aa13.97□□□□□ -0.17
SYVN1-204ENST00000449943 NGDNQ8NEJ9 315 aaKnown RBP13.97□□□□□ -0.17
SYVN1-204ENST00000449943 TRIM44Q96DX7 344 aaPredicted RBP13.97□□□□□ -0.17
SYVN1-204ENST00000449943 DLC1Q96QB1 1528 aa13.97□□□□□ -0.17
SYVN1-204ENST00000449943 PRR36Q9H6K5 1346 aa13.97□□□□□ -0.17
SYVN1-204ENST00000449943 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms