RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 CHRNA2Q15822 529 aa14.62□□□□□ -0.07
SMPD4-211ENST00000449159 COG3Q96JB2 828 aa14.62□□□□□ -0.07
SMPD4-211ENST00000449159 PRDM11Q9NQV5 511 aa14.62□□□□□ -0.07
SMPD4-211ENST00000449159 ZBTB7CA1YPR0 619 aa14.61□□□□□ -0.07
SMPD4-211ENST00000449159 PER1O15534 1290 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-211ENST00000449159 FBLN1P23142 703 aa14.61□□□□□ -0.07
SMPD4-211ENST00000449159 AMER1Q5JTC6 1135 aaPredicted RBP14.6□□□□□ -0.07
SMPD4-211ENST00000449159 KCNH5Q8NCM2 988 aa14.6□□□□□ -0.07
SMPD4-211ENST00000449159 KNSTRNQ9Y448 316 aa14.6□□□□□ -0.07
SMPD4-211ENST00000449159 THSD7AQ9UPZ6 1657 aa14.6□□□□□ -0.07
SMPD4-211ENST00000449159 CAMTA1Q9Y6Y1 1673 aa14.6□□□□□ -0.07
SMPD4-211ENST00000449159 MAP2P11137 1827 aaKnown RBP14.59□□□□□ -0.07
SMPD4-211ENST00000449159 PEAK1Q9H792 1746 aa14.59□□□□□ -0.07
SMPD4-211ENST00000449159 ARHGEF25Q86VW2 580 aa14.59□□□□□ -0.07
SMPD4-211ENST00000449159 BTG4Q9NY30 223 aa14.58□□□□□ -0.08
SMPD4-211ENST00000449159 NSD2O96028 1365 aa14.58□□□□□ -0.08
SMPD4-211ENST00000449159 VPS72Q15906 364 aa14.57□□□□□ -0.08
SMPD4-211ENST00000449159 AATKQ6ZMQ8 1374 aa14.57□□□□□ -0.08
SMPD4-211ENST00000449159 COL5A2P05997 1499 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-211ENST00000449159 ABCC6O95255 1503 aa14.56□□□□□ -0.08
SMPD4-211ENST00000449159 ZNF316A6NFI3 1004 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-211ENST00000449159 DDX10Q13206 875 aaKnown RBP14.56□□□□□ -0.08
SMPD4-211ENST00000449159 SF3B2Q13435 895 aaKnown RBP14.56□□□□□ -0.08
SMPD4-211ENST00000449159 CNGB1Q14028 1251 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-211ENST00000449159 RRS1Q15050 365 aaKnown RBP14.56□□□□□ -0.08
SMPD4-211ENST00000449159 AXIN2Q9Y2T1 843 aa14.56□□□□□ -0.08
SMPD4-211ENST00000449159 TNNT2P45379 298 aaPredicted RBP14.55□□□□□ -0.08
SMPD4-211ENST00000449159 CC2D1BQ5T0F9 858 aaKnown RBP14.55□□□□□ -0.08
SMPD4-211ENST00000449159 SEPT12Q8IYM1 358 aa14.55□□□□□ -0.08
SMPD4-211ENST00000449159 CCDC9Q9Y3X0 531 aaKnown RBP14.55□□□□□ -0.08
SMPD4-211ENST00000449159 MAP3K19Q56UN5 1328 aa14.55□□□□□ -0.08
SMPD4-211ENST00000449159 STRN4Q9NRL3 753 aa14.54□□□□□ -0.08
SMPD4-211ENST00000449159 RGPD2P0DJD1 1756 aa14.53□□□□□ -0.08
SMPD4-211ENST00000449159 MORC1Q86VD1 984 aa14.53□□□□□ -0.08
SMPD4-211ENST00000449159 NPC1L1Q9UHC9 1359 aa14.52□□□□□ -0.08
SMPD4-211ENST00000449159 A0A0G2JS52 829 aa14.52□□□□□ -0.09
SMPD4-211ENST00000449159 MYT1Q01538 1121 aa14.52□□□□□ -0.09
SMPD4-211ENST00000449159 KRT27Q7Z3Y8 459 aa14.52□□□□□ -0.09
SMPD4-211ENST00000449159 DEFB132Q7Z7B7 95 aa14.52□□□□□ -0.09
SMPD4-211ENST00000449159 EMILIN1Q9Y6C2 1016 aa14.52□□□□□ -0.09
SMPD4-211ENST00000449159 RREB1Q92766 1687 aa14.52□□□□□ -0.09
SMPD4-211ENST00000449159 WNK3Q9BYP7 1800 aa14.5□□□□□ -0.09
SMPD4-211ENST00000449159 RTL1A6NKG5 1358 aa14.5□□□□□ -0.09
SMPD4-211ENST00000449159 FAM208AQ9UK61 1670 aaKnown RBP14.5□□□□□ -0.09
SMPD4-211ENST00000449159 HOXC9P31274 260 aa14.5□□□□□ -0.09
SMPD4-211ENST00000449159 LARP1Q6PKG0 1096 aaKnown RBP14.5□□□□□ -0.09
SMPD4-211ENST00000449159 IP6K1Q92551 441 aa14.5□□□□□ -0.09
SMPD4-211ENST00000449159 SMG6Q86US8 1419 aaKnown RBP14.49□□□□□ -0.09
SMPD4-211ENST00000449159 ONECUT3O60422 494 aaPredicted RBP14.49□□□□□ -0.09
SMPD4-211ENST00000449159 AMPHP49418 695 aa14.49□□□□□ -0.09
SMPD4-211ENST00000449159 POLKQ9UBT6 870 aa14.49□□□□□ -0.09
SMPD4-211ENST00000449159 DISP2A7MBM2 1401 aa14.49□□□□□ -0.09
SMPD4-211ENST00000449159 FLT4P35916 1363 aa14.48□□□□□ -0.09
SMPD4-211ENST00000449159 SPATA31A5Q5VU36 1347 aa14.48□□□□□ -0.09
SMPD4-211ENST00000449159 SPATA31A7Q8IWB4 1347 aa14.48□□□□□ -0.09
SMPD4-211ENST00000449159 BAG6P46379 1132 aa14.48□□□□□ -0.09
SMPD4-211ENST00000449159 EVA1CP58658 441 aa14.48□□□□□ -0.09
SMPD4-211ENST00000449159 NUP188Q5SRE5 1749 aa14.48□□□□□ -0.09
SMPD4-211ENST00000449159 CRB1P82279 1406 aa14.48□□□□□ -0.09
SMPD4-211ENST00000449159 ERBB3P21860 1342 aa14.47□□□□□ -0.09
SMPD4-211ENST00000449159 WDR17Q8IZU2 1322 aa14.47□□□□□ -0.09
SMPD4-211ENST00000449159 PPM1GO15355 546 aaPredicted RBP14.47□□□□□ -0.09
SMPD4-211ENST00000449159 FAM98CQ17RN3 349 aaKnown RBP14.47□□□□□ -0.09
SMPD4-211ENST00000449159 HSP90AB2PQ58FF8 381 aa14.47□□□□□ -0.09
SMPD4-211ENST00000449159 ANKRD24Q8TF21 1146 aa14.47□□□□□ -0.09
SMPD4-211ENST00000449159 LTV1Q96GA3 475 aaPredicted RBP14.47□□□□□ -0.09
SMPD4-211ENST00000449159 KIF24Q5T7B8 1368 aa14.47□□□□□ -0.09
SMPD4-211ENST00000449159 SPATA31A1Q5TZJ5 1347 aa14.46□□□□□ -0.09
SMPD4-211ENST00000449159 USP35Q9P2H5 1018 aa14.46□□□□□ -0.09
SMPD4-211ENST00000449159 INSRP06213 1382 aa14.46□□□□□ -0.1
SMPD4-211ENST00000449159 CSB-PGBD3P0DP91 1061 aa14.45□□□□□ -0.1
SMPD4-211ENST00000449159 TOM1L2Q6ZVM7 507 aa14.45□□□□□ -0.1
SMPD4-211ENST00000449159 PARD3Q8TEW0 1356 aa14.45□□□□□ -0.1
SMPD4-211ENST00000449159 PARP4Q9UKK3 1724 aaKnown RBP14.44□□□□□ -0.1
SMPD4-211ENST00000449159 RGPD3A6NKT7 1758 aaPredicted RBP14.44□□□□□ -0.1
SMPD4-211ENST00000449159 RGPD4Q7Z3J3 1758 aa14.44□□□□□ -0.1
SMPD4-211ENST00000449159 LRRC37A3O60309 1634 aa14.42□□□□□ -0.1
SMPD4-211ENST00000449159 PSDA5PKW4 1024 aaPredicted RBP14.42□□□□□ -0.1
SMPD4-211ENST00000449159 NLRP2Q9NX02 1062 aa14.42□□□□□ -0.1
SMPD4-211ENST00000449159 PPP2R1AP30153 589 aa14.41□□□□□ -0.1
SMPD4-211ENST00000449159 MTHFSP49914 203 aa14.41□□□□□ -0.1
SMPD4-211ENST00000449159 TCP11L2Q8N4U5 519 aa14.41□□□□□ -0.1
SMPD4-211ENST00000449159 CARD10Q9BWT7 1032 aa14.41□□□□□ -0.1
SMPD4-211ENST00000449159 COL3A1P02461 1466 aaPredicted RBP14.41□□□□□ -0.1
SMPD4-211ENST00000449159 EIF4A2Q14240 407 aaKnown RBP14.4□□□□□ -0.1
SMPD4-211ENST00000449159 USHBP1Q8N6Y0 703 aa14.4□□□□□ -0.1
SMPD4-211ENST00000449159 NBPF6Q5VWK0 638 aa14.39□□□□□ -0.11
SMPD4-211ENST00000449159 BARGINQ6ZT62 677 aa14.39□□□□□ -0.11
SMPD4-211ENST00000449159 NBPF4Q96M43 638 aa14.39□□□□□ -0.11
SMPD4-211ENST00000449159 THRAP3Q9Y2W1 955 aaKnown RBP14.38□□□□□ -0.11
SMPD4-211ENST00000449159 SBF2Q86WG5 1849 aa14.38□□□□□ -0.11
SMPD4-211ENST00000449159 SHANK3Q9BYB0 1731 aa14.38□□□□□ -0.11
SMPD4-211ENST00000449159 MEGF6O75095 1541 aa14.37□□□□□ -0.11
SMPD4-211ENST00000449159 EN1Q05925 392 aaPredicted RBP14.37□□□□□ -0.11
SMPD4-211ENST00000449159 FAM182BQ5T319 152 aa14.37□□□□□ -0.11
SMPD4-211ENST00000449159 NCAPD2Q15021 1401 aa14.37□□□□□ -0.11
SMPD4-211ENST00000449159 EYA1Q99502 592 aa14.36□□□□□ -0.11
SMPD4-211ENST00000449159 PRKRIP1Q9H875 184 aaPredicted RBP14.36□□□□□ -0.11
SMPD4-211ENST00000449159 IL13P35225 146 aa14.35□□□□□ -0.11
SMPD4-211ENST00000449159 R3HDM1Q15032 1099 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms