RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 ARHGEF10O15013 1369 aa10.45□□□□□ -0.74
LINC00954-202ENST00000449086 PER1O15534 1290 aaPredicted RBP10.45□□□□□ -0.74
LINC00954-202ENST00000449086 KRT28Q7Z3Y7 464 aa10.45□□□□□ -0.74
LINC00954-202ENST00000449086 FOXO3O43524 673 aa10.44□□□□□ -0.74
LINC00954-202ENST00000449086 LRRC59Q96AG4 307 aaKnown RBP10.44□□□□□ -0.74
LINC00954-202ENST00000449086 SPATA31A3Q5VYP0 1347 aa10.44□□□□□ -0.74
LINC00954-202ENST00000449086 GLIPR1L2Q4G1C9 344 aa10.44□□□□□ -0.74
LINC00954-202ENST00000449086 VSIG10Q8N0Z9 540 aa10.44□□□□□ -0.74
LINC00954-202ENST00000449086 NSD2O96028 1365 aa10.43□□□□□ -0.74
LINC00954-202ENST00000449086 USP31Q70CQ4 1352 aa10.43□□□□□ -0.74
LINC00954-202ENST00000449086 KIF20BQ96Q89 1820 aa10.43□□□□□ -0.74
LINC00954-202ENST00000449086 JCADQ9P266 1359 aa10.42□□□□□ -0.74
LINC00954-202ENST00000449086 NPC1L1Q9UHC9 1359 aa10.42□□□□□ -0.74
LINC00954-202ENST00000449086 PIK3C2AO00443 1686 aa10.42□□□□□ -0.74
LINC00954-202ENST00000449086 C8orf34Q49A92 452 aa10.42□□□□□ -0.74
LINC00954-202ENST00000449086 PANK3Q9H999 370 aa10.42□□□□□ -0.74
LINC00954-202ENST00000449086 TTC21BQ7Z4L5 1316 aa10.42□□□□□ -0.74
LINC00954-202ENST00000449086 CENPQQ7L2Z9 268 aaPredicted RBP10.42□□□□□ -0.74
LINC00954-202ENST00000449086 PARD3Q8TEW0 1356 aa10.42□□□□□ -0.74
LINC00954-202ENST00000449086 ANKRD26Q9UPS8 1709 aa10.42□□□□□ -0.74
LINC00954-202ENST00000449086 CRYBG1Q9Y4K1 1723 aa10.42□□□□□ -0.74
LINC00954-202ENST00000449086 GZF1Q9H116 711 aaPredicted RBP10.41□□□□□ -0.74
LINC00954-202ENST00000449086 RRAGDQ9NQL2 400 aaPredicted RBP10.41□□□□□ -0.74
LINC00954-202ENST00000449086 NSD3Q9BZ95 1437 aa10.41□□□□□ -0.74
LINC00954-202ENST00000449086 PNPLA6Q8IY17 1366 aa10.41□□□□□ -0.74
LINC00954-202ENST00000449086 SPRYD3Q8NCJ5 442 aa10.41□□□□□ -0.74
LINC00954-202ENST00000449086 SLIT3O75094 1523 aa10.41□□□□□ -0.74
LINC00954-202ENST00000449086 CGNL1Q0VF96 1302 aa10.4□□□□□ -0.74
LINC00954-202ENST00000449086 ABCA3Q99758 1704 aa10.4□□□□□ -0.74
LINC00954-202ENST00000449086 HSPA1LP34931 641 aa10.4□□□□□ -0.75
LINC00954-202ENST00000449086 SPATA31A6Q5VVP1 1343 aa10.4□□□□□ -0.75
LINC00954-202ENST00000449086 MARF1Q9Y4F3 1742 aaKnown RBP10.4□□□□□ -0.75
LINC00954-202ENST00000449086 OVOS2A0A0J9YW53 1432 aa10.4□□□□□ -0.75
LINC00954-202ENST00000449086 OVOS2Q6IE36 1432 aa10.4□□□□□ -0.75
LINC00954-202ENST00000449086 USP19O94966 1318 aa10.39□□□□□ -0.75
LINC00954-202ENST00000449086 PHRF1Q9P1Y6 1649 aaKnown RBP10.39□□□□□ -0.75
LINC00954-202ENST00000449086 CARD14Q9BXL6 1004 aa10.39□□□□□ -0.75
LINC00954-202ENST00000449086 DDX17Q92841 729 aaKnown RBP10.38□□□□□ -0.75
LINC00954-202ENST00000449086 ABCC6O95255 1503 aa10.38□□□□□ -0.75
LINC00954-202ENST00000449086 PNNQ9H307 717 aaKnown RBP10.38□□□□□ -0.75
LINC00954-202ENST00000449086 KNSTRNQ9Y448 316 aa10.38□□□□□ -0.75
LINC00954-202ENST00000449086 KDM2BQ8NHM5 1336 aa10.37□□□□□ -0.75
LINC00954-202ENST00000449086 XPCQ01831 940 aaPredicted RBP10.37□□□□□ -0.75
LINC00954-202ENST00000449086 ABTB2Q8N961 1025 aa10.37□□□□□ -0.75
LINC00954-202ENST00000449086 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.37□□□□□ -0.75
LINC00954-202ENST00000449086 BECN1Q14457 450 aa10.36□□□□□ -0.75
LINC00954-202ENST00000449086 FYB1O15117 783 aa10.36□□□□□ -0.75
LINC00954-202ENST00000449086 HSP90AA2PQ14568 343 aaPredicted RBP10.36□□□□□ -0.75
LINC00954-202ENST00000449086 L1TD1Q5T7N2 865 aaKnown RBP10.36□□□□□ -0.75
LINC00954-202ENST00000449086 KCNH5Q8NCM2 988 aa10.36□□□□□ -0.75
LINC00954-202ENST00000449086 ADAMTS8Q9UP79 889 aa10.36□□□□□ -0.75
LINC00954-202ENST00000449086 WDR43Q15061 677 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC00954-202ENST00000449086 AMER1Q5JTC6 1135 aaPredicted RBP10.35□□□□□ -0.75
LINC00954-202ENST00000449086 ZMYND15Q9H091 742 aa10.35□□□□□ -0.75
LINC00954-202ENST00000449086 NFAT5O94916 1531 aa10.35□□□□□ -0.75
LINC00954-202ENST00000449086 CPDO75976 1380 aa10.35□□□□□ -0.75
LINC00954-202ENST00000449086 HSP90AA1P07900 732 aaKnown RBP10.35□□□□□ -0.75
LINC00954-202ENST00000449086 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC00954-202ENST00000449086 COG3Q96JB2 828 aa10.35□□□□□ -0.75
LINC00954-202ENST00000449086 AATKQ6ZMQ8 1374 aa10.34□□□□□ -0.75
LINC00954-202ENST00000449086 SEC24BO95487 1268 aa10.34□□□□□ -0.75
LINC00954-202ENST00000449086 CANXP27824 592 aaKnown RBP10.34□□□□□ -0.75
LINC00954-202ENST00000449086 NLRP6P59044 892 aa10.34□□□□□ -0.75
LINC00954-202ENST00000449086 KIF24Q5T7B8 1368 aa10.34□□□□□ -0.75
LINC00954-202ENST00000449086 NME9Q86XW9 330 aa10.34□□□□□ -0.75
LINC00954-202ENST00000449086 PANK2Q9BZ23 570 aa10.33□□□□□ -0.76
LINC00954-202ENST00000449086 GOLGA6L3A6NEY3 463 aa10.33□□□□□ -0.76
LINC00954-202ENST00000449086 COL14A1Q05707 1796 aaKnown RBP10.33□□□□□ -0.76
LINC00954-202ENST00000449086 CCDC146Q8IYE0 955 aa10.32□□□□□ -0.76
LINC00954-202ENST00000449086 GOLGA2Q08379 1002 aa10.32□□□□□ -0.76
LINC00954-202ENST00000449086 RTL1A6NKG5 1358 aa10.32□□□□□ -0.76
LINC00954-202ENST00000449086 GCP02774 474 aa10.32□□□□□ -0.76
LINC00954-202ENST00000449086 LMOD2Q6P5Q4 547 aa10.32□□□□□ -0.76
LINC00954-202ENST00000449086 UPF2Q9HAU5 1272 aaKnown RBP10.32□□□□□ -0.76
LINC00954-202ENST00000449086 BCAR3O75815 825 aa10.31□□□□□ -0.76
LINC00954-202ENST00000449086 NWD2Q9ULI1 1742 aa10.31□□□□□ -0.76
LINC00954-202ENST00000449086 XRCC6P12956 609 aaKnown RBP eCLIP10.31□□□□□ -0.76
LINC00954-202ENST00000449086 ILDR1Q86SU0 546 aaPredicted RBP10.31□□□□□ -0.76
LINC00954-202ENST00000449086 GGNBP2Q9H3C7 697 aa10.31□□□□□ -0.76
LINC00954-202ENST00000449086 LRP6O75581 1613 aa10.31□□□□□ -0.76
LINC00954-202ENST00000449086 BLMP54132 1417 aaPredicted RBP10.3□□□□□ -0.76
LINC00954-202ENST00000449086 DUSP27Q5VZP5 1158 aa10.3□□□□□ -0.76
LINC00954-202ENST00000449086 LMO7Q8WWI1 1683 aa10.3□□□□□ -0.76
LINC00954-202ENST00000449086 PPP2R1AP30153 589 aa10.3□□□□□ -0.76
LINC00954-202ENST00000449086 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.3□□□□□ -0.76
LINC00954-202ENST00000449086 LTN1O94822 1766 aa10.29□□□□□ -0.76
LINC00954-202ENST00000449086 IGHDP01880 384 aa10.29□□□□□ -0.76
LINC00954-202ENST00000449086 MORC1Q86VD1 984 aa10.29□□□□□ -0.76
LINC00954-202ENST00000449086 COL18A1P39060 1754 aa10.29□□□□□ -0.76
LINC00954-202ENST00000449086 DCAF8L1A6NGE4 600 aa10.29□□□□□ -0.76
LINC00954-202ENST00000449086 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
LINC00954-202ENST00000449086 ARHGEF25Q86VW2 580 aa10.29□□□□□ -0.76
LINC00954-202ENST00000449086 ZRANB1Q9UGI0 708 aa10.29□□□□□ -0.76
LINC00954-202ENST00000449086 PLCH1Q4KWH8 1693 aa10.28□□□□□ -0.76
LINC00954-202ENST00000449086 NUTM2GQ5VZR2 741 aa10.28□□□□□ -0.76
LINC00954-202ENST00000449086 COG6Q9Y2V7 657 aa10.28□□□□□ -0.76
LINC00954-202ENST00000449086 SLIT2O94813 1529 aa10.28□□□□□ -0.76
LINC00954-202ENST00000449086 FAM208AQ9UK61 1670 aaKnown RBP10.28□□□□□ -0.76
LINC00954-202ENST00000449086 CDK12Q9NYV4 1490 aaPredicted RBP10.27□□□□□ -0.76
LINC00954-202ENST00000449086 NRAPQ86VF7 1730 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms