RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 NEK4P51957 841 aa12.18□□□□□ -0.46
SCN10A-201ENST00000449082 WWC2Q6AWC2 1192 aa12.18□□□□□ -0.46
SCN10A-201ENST00000449082 LAMC3Q9Y6N6 1575 aa12.18□□□□□ -0.46
SCN10A-201ENST00000449082 FANCIQ9NVI1 1328 aa12.18□□□□□ -0.46
SCN10A-201ENST00000449082 GNAT3A8MTJ3 354 aa12.18□□□□□ -0.46
SCN10A-201ENST00000449082 STARD3NLO95772 234 aa12.18□□□□□ -0.46
SCN10A-201ENST00000449082 ATP2B2Q01814 1243 aa12.18□□□□□ -0.46
SCN10A-201ENST00000449082 RABEP1Q15276 862 aa12.18□□□□□ -0.46
SCN10A-201ENST00000449082 ZNF396Q96N95 335 aaPredicted RBP12.18□□□□□ -0.46
SCN10A-201ENST00000449082 TMEM132AQ24JP5 1023 aa12.17□□□□□ -0.46
SCN10A-201ENST00000449082 ARHGEF11O15085 1522 aa12.17□□□□□ -0.46
SCN10A-201ENST00000449082 RBM5P52756 815 aaKnown RBP eCLIP12.17□□□□□ -0.46
SCN10A-201ENST00000449082 ATF7IPQ6VMQ6 1270 aa12.17□□□□□ -0.46
SCN10A-201ENST00000449082 LETM1O95202 739 aaPredicted RBP12.17□□□□□ -0.46
SCN10A-201ENST00000449082 ATP2B1P20020 1258 aa12.17□□□□□ -0.46
SCN10A-201ENST00000449082 ANKRD1Q15327 319 aa12.16□□□□□ -0.46
SCN10A-201ENST00000449082 CEP126Q9P2H0 1117 aa12.16□□□□□ -0.46
SCN10A-201ENST00000449082 ZNF428Q96B54 188 aa12.16□□□□□ -0.46
SCN10A-201ENST00000449082 CYP46A1Q9Y6A2 500 aa12.16□□□□□ -0.46
SCN10A-201ENST00000449082 ABCA10Q8WWZ4 1543 aa12.16□□□□□ -0.46
SCN10A-201ENST00000449082 NSD3Q9BZ95 1437 aa12.16□□□□□ -0.46
SCN10A-201ENST00000449082 NFE2L2Q16236 605 aa12.16□□□□□ -0.46
SCN10A-201ENST00000449082 TRIM22Q8IYM9 498 aa12.16□□□□□ -0.46
SCN10A-201ENST00000449082 KINO60870 393 aaKnown RBP12.15□□□□□ -0.46
SCN10A-201ENST00000449082 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.15□□□□□ -0.46
SCN10A-201ENST00000449082 CCDC69A6NI79 296 aa12.15□□□□□ -0.46
SCN10A-201ENST00000449082 BCAR3O75815 825 aa12.15□□□□□ -0.46
SCN10A-201ENST00000449082 IGHMBP2P38935 993 aaKnown RBP12.15□□□□□ -0.46
SCN10A-201ENST00000449082 KIF14Q15058 1648 aa12.15□□□□□ -0.46
SCN10A-201ENST00000449082 KRT18P05783 430 aaKnown RBP12.15□□□□□ -0.46
SCN10A-201ENST00000449082 AACSQ86V21 672 aa12.15□□□□□ -0.46
SCN10A-201ENST00000449082 ADGRL1O94910 1474 aa12.15□□□□□ -0.46
SCN10A-201ENST00000449082 SRGAP3O43295 1099 aa12.14□□□□□ -0.47
SCN10A-201ENST00000449082 FKBP4Q02790 459 aaKnown RBP eCLIP12.14□□□□□ -0.47
SCN10A-201ENST00000449082 ZNF652Q9Y2D9 606 aa12.14□□□□□ -0.47
SCN10A-201ENST00000449082 JMYQ8N9B5 988 aa12.14□□□□□ -0.47
SCN10A-201ENST00000449082 CUL7Q14999 1698 aa12.14□□□□□ -0.47
SCN10A-201ENST00000449082 MVPQ14764 893 aaKnown RBP12.14□□□□□ -0.47
SCN10A-201ENST00000449082 STK38Q15208 465 aa12.14□□□□□ -0.47
SCN10A-201ENST00000449082 PDILTQ8N807 584 aa12.14□□□□□ -0.47
SCN10A-201ENST00000449082 MAGEC2Q9UBF1 373 aaPredicted RBP12.13□□□□□ -0.47
SCN10A-201ENST00000449082 BICDL1Q6ZP65 573 aa12.13□□□□□ -0.47
SCN10A-201ENST00000449082 TMOD3Q9NYL9 352 aa12.13□□□□□ -0.47
SCN10A-201ENST00000449082 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
SCN10A-201ENST00000449082 MBD3O95983 291 aa12.13□□□□□ -0.47
SCN10A-201ENST00000449082 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
SCN10A-201ENST00000449082 FILIP1LQ4L180 1135 aa12.13□□□□□ -0.47
SCN10A-201ENST00000449082 ZFYVE27Q5T4F4 411 aa12.13□□□□□ -0.47
SCN10A-201ENST00000449082 WAPLQ7Z5K2 1190 aa12.13□□□□□ -0.47
SCN10A-201ENST00000449082 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.13□□□□□ -0.472e-6■■■■■ 149.1
SCN10A-201ENST00000449082 IFT57Q9NWB7 429 aa12.13□□□□□ -0.47
SCN10A-201ENST00000449082 CTNNA3Q9UI47 895 aa12.13□□□□□ -0.47
SCN10A-201ENST00000449082 CAMSAP2Q08AD1 1489 aa12.12□□□□□ -0.47
SCN10A-201ENST00000449082 CCDC173Q0VFZ6 552 aa12.12□□□□□ -0.47
SCN10A-201ENST00000449082 AEBP1Q8IUX7 1158 aa12.12□□□□□ -0.47
SCN10A-201ENST00000449082 AMOTQ4VCS5 1084 aa12.12□□□□□ -0.47
SCN10A-201ENST00000449082 RAI14Q9P0K7 980 aa12.12□□□□□ -0.47
SCN10A-201ENST00000449082 SETQ01105 290 aaPredicted RBP12.12□□□□□ -0.47
SCN10A-201ENST00000449082 ZSCAN29Q8IWY8 852 aaPredicted RBP12.12□□□□□ -0.47
SCN10A-201ENST00000449082 STK11IPQ8N1F8 1099 aa12.12□□□□□ -0.47
SCN10A-201ENST00000449082 TMPOP42166 694 aaKnown RBP12.12□□□□□ -0.47
SCN10A-201ENST00000449082 CDR1P51861 262 aa12.11□□□□□ -0.47
SCN10A-201ENST00000449082 MAP4K4O95819 1239 aaPredicted RBP12.11□□□□□ -0.47
SCN10A-201ENST00000449082 TDO2P48775 406 aa12.11□□□□□ -0.47
SCN10A-201ENST00000449082 MNS1Q8NEH6 495 aa12.11□□□□□ -0.47
SCN10A-201ENST00000449082 RUFY1Q96T51 708 aa12.11□□□□□ -0.47
SCN10A-201ENST00000449082 RPAP2Q8IXW5 612 aaPredicted RBP12.11□□□□□ -0.47
SCN10A-201ENST00000449082 LRP2BPQ9P2M1 347 aa12.11□□□□□ -0.47
SCN10A-201ENST00000449082 ZPR1O75312 459 aa12.11□□□□□ -0.47
SCN10A-201ENST00000449082 NUP133Q8WUM0 1156 aa12.11□□□□□ -0.47
SCN10A-201ENST00000449082 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
SCN10A-201ENST00000449082 RDXP35241 583 aaKnown RBP12.11□□□□□ -0.47
SCN10A-201ENST00000449082 HSP90AB2PQ58FF8 381 aa12.1□□□□□ -0.47
SCN10A-201ENST00000449082 CHD1LQ86WJ1 897 aa12.1□□□□□ -0.47
SCN10A-201ENST00000449082 CDKL5O76039 1030 aa12.1□□□□□ -0.47
SCN10A-201ENST00000449082 SMARCE1Q969G3 411 aa12.1□□□□□ -0.47
SCN10A-201ENST00000449082 TMOD2Q9NZR1 351 aa12.1□□□□□ -0.47
SCN10A-201ENST00000449082 NOL7Q9UMY1 257 aaKnown RBP12.1□□□□□ -0.47
SCN10A-201ENST00000449082 AMOTL2Q9Y2J4 779 aa12.1□□□□□ -0.47
SCN10A-201ENST00000449082 PPP6R1Q9UPN7 881 aa12.1□□□□□ -0.47
SCN10A-201ENST00000449082 LRPPRCP42704 1394 aaKnown RBP12.1□□□□□ -0.47
SCN10A-201ENST00000449082 STK3Q13188 491 aa12.1□□□□□ -0.47
SCN10A-201ENST00000449082 UBAC1Q9BSL1 405 aa12.1□□□□□ -0.47
SCN10A-201ENST00000449082 GRIN2AQ12879 1464 aa12.1□□□□□ -0.47
SCN10A-201ENST00000449082 SYCP1Q15431 976 aa12.09□□□□□ -0.47
SCN10A-201ENST00000449082 AK7Q96M32 723 aa12.09□□□□□ -0.47
SCN10A-201ENST00000449082 LARP1Q6PKG0 1096 aaKnown RBP12.09□□□□□ -0.47
SCN10A-201ENST00000449082 AKAP2Q9Y2D5 859 aa12.09□□□□□ -0.47
SCN10A-201ENST00000449082 DUSP27Q5VZP5 1158 aa12.09□□□□□ -0.47
SCN10A-201ENST00000449082 ACBD3Q9H3P7 528 aa12.09□□□□□ -0.47
SCN10A-201ENST00000449082 ARGLU1Q9NWB6 273 aaPredicted RBP12.09□□□□□ -0.47
SCN10A-201ENST00000449082 BLOC1S2Q6QNY1 142 aa12.09□□□□□ -0.47
SCN10A-201ENST00000449082 PLB1Q6P1J6 1458 aa12.09□□□□□ -0.47
SCN10A-201ENST00000449082 KRT32Q14532 448 aa12.09□□□□□ -0.47
SCN10A-201ENST00000449082 FAM135AQ9P2D6 1515 aa12.09□□□□□ -0.47
SCN10A-201ENST00000449082 CEBPZQ03701 1054 aaKnown RBP12.08□□□□□ -0.48
SCN10A-201ENST00000449082 METTL24Q5JXM2 366 aa12.08□□□□□ -0.48
SCN10A-201ENST00000449082 RSPH6AQ9H0K4 717 aa12.08□□□□□ -0.48
SCN10A-201ENST00000449082 CCDC39Q9UFE4 941 aa12.08□□□□□ -0.48
SCN10A-201ENST00000449082 PTCD1O75127 700 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms