RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 NGLY1Q96IV0 654 aa19.08■□□□□ 0.64
CTSS-202ENST00000448301 TNNT2P45379 298 aaPredicted RBP19.07■□□□□ 0.64
CTSS-202ENST00000448301 RRS1Q15050 365 aaKnown RBP19.07■□□□□ 0.64
CTSS-202ENST00000448301 CHRNA2Q15822 529 aa19.07■□□□□ 0.64
CTSS-202ENST00000448301 BLMP54132 1417 aaPredicted RBP19.06■□□□□ 0.64
CTSS-202ENST00000448301 ZBTB7CA1YPR0 619 aa19.06■□□□□ 0.64
CTSS-202ENST00000448301 CNGB1Q14028 1251 aaPredicted RBP19.06■□□□□ 0.64
CTSS-202ENST00000448301 FAM208AQ9UK61 1670 aaKnown RBP19.06■□□□□ 0.64
CTSS-202ENST00000448301 COL5A2P05997 1499 aaPredicted RBP19.05■□□□□ 0.64
CTSS-202ENST00000448301 BCL9LQ86UU0 1499 aa19.05■□□□□ 0.64
CTSS-202ENST00000448301 FLT4P35916 1363 aa19.05■□□□□ 0.64
CTSS-202ENST00000448301 AFF2P51816 1311 aa19.04■□□□□ 0.64
CTSS-202ENST00000448301 CDK12Q9NYV4 1490 aaPredicted RBP19.04■□□□□ 0.64
CTSS-202ENST00000448301 BTG4Q9NY30 223 aa19.04■□□□□ 0.64
CTSS-202ENST00000448301 POLKQ9UBT6 870 aa19.04■□□□□ 0.64
CTSS-202ENST00000448301 EMILIN1Q9Y6C2 1016 aa19.04■□□□□ 0.64
CTSS-202ENST00000448301 HOXC9P31274 260 aa19.03■□□□□ 0.64
CTSS-202ENST00000448301 AMPHP49418 695 aa19.03■□□□□ 0.64
CTSS-202ENST00000448301 RALBP1Q15311 655 aa19.03■□□□□ 0.64
CTSS-202ENST00000448301 IP6K1Q92551 441 aa19.03■□□□□ 0.64
CTSS-202ENST00000448301 AXIN2Q9Y2T1 843 aa19.02■□□□□ 0.64
CTSS-202ENST00000448301 USP21Q9UK80 565 aa19.01■□□□□ 0.63
CTSS-202ENST00000448301 INSRP06213 1382 aa19.01■□□□□ 0.63
CTSS-202ENST00000448301 UNC5CLQ8IV45 518 aa19■□□□□ 0.63
CTSS-202ENST00000448301 PRKRIP1Q9H875 184 aaPredicted RBP19■□□□□ 0.63
CTSS-202ENST00000448301 PPP2R1AP30153 589 aa19■□□□□ 0.63
CTSS-202ENST00000448301 ZNF772Q68DY9 489 aaPredicted RBP19■□□□□ 0.63
CTSS-202ENST00000448301 RGPD2P0DJD1 1756 aa18.99■□□□□ 0.63
CTSS-202ENST00000448301 MAPK8IP2Q13387 824 aaPredicted RBP18.99■□□□□ 0.63
CTSS-202ENST00000448301 ERBB3P21860 1342 aa18.98■□□□□ 0.63
CTSS-202ENST00000448301 ATRNO75882 1429 aa18.98■□□□□ 0.63
CTSS-202ENST00000448301 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
CTSS-202ENST00000448301 MTHFSP49914 203 aa18.98■□□□□ 0.63
CTSS-202ENST00000448301 WNK3Q9BYP7 1800 aa18.97■□□□□ 0.63
CTSS-202ENST00000448301 HSP90AB2PQ58FF8 381 aa18.97■□□□□ 0.63
CTSS-202ENST00000448301 WDR17Q8IZU2 1322 aa18.97■□□□□ 0.63
CTSS-202ENST00000448301 EVA1CP58658 441 aa18.96■□□□□ 0.63
CTSS-202ENST00000448301 VPS72Q15906 364 aa18.96■□□□□ 0.63
CTSS-202ENST00000448301 ANKRD24Q8TF21 1146 aa18.96■□□□□ 0.63
CTSS-202ENST00000448301 STRN4Q9NRL3 753 aa18.96■□□□□ 0.63
CTSS-202ENST00000448301 RGS17Q9UGC6 210 aaPredicted RBP18.96■□□□□ 0.63
CTSS-202ENST00000448301 TRPC5Q9UL62 973 aaPredicted RBP18.96■□□□□ 0.63
CTSS-202ENST00000448301 MYBBP1AQ9BQG0 1328 aaKnown RBP18.96■□□□□ 0.63
CTSS-202ENST00000448301 CRB1P82279 1406 aa18.96■□□□□ 0.63
CTSS-202ENST00000448301 COL3A1P02461 1466 aaPredicted RBP18.96■□□□□ 0.63
CTSS-202ENST00000448301 GLI3P10071 1580 aa18.95■□□□□ 0.62
CTSS-202ENST00000448301 ANP32CO43423 234 aa18.94■□□□□ 0.62
CTSS-202ENST00000448301 RGPD1P0DJD0 1748 aa18.94■□□□□ 0.62
CTSS-202ENST00000448301 LARP1Q6PKG0 1096 aaKnown RBP18.93■□□□□ 0.62
CTSS-202ENST00000448301 CSB-PGBD3P0DP91 1061 aa18.92■□□□□ 0.62
CTSS-202ENST00000448301 QTRT2Q9H974 415 aaKnown RBP18.92■□□□□ 0.62
CTSS-202ENST00000448301 SPATA31A5Q5VU36 1347 aa18.92■□□□□ 0.62
CTSS-202ENST00000448301 SPATA31A7Q8IWB4 1347 aa18.92■□□□□ 0.62
CTSS-202ENST00000448301 LTV1Q96GA3 475 aaPredicted RBP18.91■□□□□ 0.62
CTSS-202ENST00000448301 SPATA31A1Q5TZJ5 1347 aa18.91■□□□□ 0.62
CTSS-202ENST00000448301 EIF4A2Q14240 407 aaKnown RBP18.91■□□□□ 0.62
CTSS-202ENST00000448301 TOM1L2Q6ZVM7 507 aa18.91■□□□□ 0.62
CTSS-202ENST00000448301 CFAP53Q96M91 514 aa18.91■□□□□ 0.62
CTSS-202ENST00000448301 DIEXFQ68CQ4 756 aaKnown RBP18.9■□□□□ 0.62
CTSS-202ENST00000448301 GJD4Q96KN9 370 aaPredicted RBP18.9■□□□□ 0.62
CTSS-202ENST00000448301 CARD10Q9BWT7 1032 aa18.9■□□□□ 0.62
CTSS-202ENST00000448301 NCAPD2Q15021 1401 aa18.89■□□□□ 0.62
CTSS-202ENST00000448301 CCDC9Q9Y3X0 531 aaKnown RBP18.89■□□□□ 0.61
CTSS-202ENST00000448301 THSD7AQ9UPZ6 1657 aa18.88■□□□□ 0.61
CTSS-202ENST00000448301 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
CTSS-202ENST00000448301 POTEAQ6S8J7 498 aa18.88■□□□□ 0.61
CTSS-202ENST00000448301 NLRP2Q9NX02 1062 aa18.88■□□□□ 0.61
CTSS-202ENST00000448301 PARP4Q9UKK3 1724 aaKnown RBP18.87■□□□□ 0.61
CTSS-202ENST00000448301 IL13P35225 146 aa18.87■□□□□ 0.61
CTSS-202ENST00000448301 RBM6P78332 1123 aaKnown RBP18.87■□□□□ 0.61
CTSS-202ENST00000448301 THRAP3Q9Y2W1 955 aaKnown RBP18.87■□□□□ 0.61
CTSS-202ENST00000448301 NBPF6Q5VWK0 638 aa18.86■□□□□ 0.61
CTSS-202ENST00000448301 NBPF4Q96M43 638 aa18.86■□□□□ 0.61
CTSS-202ENST00000448301 IGSF1Q8N6C5 1336 aa18.86■□□□□ 0.61
CTSS-202ENST00000448301 TCP11L2Q8N4U5 519 aa18.85■□□□□ 0.61
CTSS-202ENST00000448301 DISP2A7MBM2 1401 aa18.85■□□□□ 0.61
CTSS-202ENST00000448301 RXRBP28702 533 aa18.84■□□□□ 0.61
CTSS-202ENST00000448301 BARGINQ6ZT62 677 aa18.84■□□□□ 0.61
CTSS-202ENST00000448301 EYA1Q99502 592 aa18.84■□□□□ 0.61
CTSS-202ENST00000448301 USP35Q9P2H5 1018 aa18.84■□□□□ 0.61
CTSS-202ENST00000448301 LRRC37A3O60309 1634 aa18.84■□□□□ 0.61
CTSS-202ENST00000448301 KDRP35968 1356 aa18.82■□□□□ 0.6
CTSS-202ENST00000448301 ONECUT3O60422 494 aaPredicted RBP18.82■□□□□ 0.6
CTSS-202ENST00000448301 BRWD3Q6RI45 1802 aa18.82■□□□□ 0.6
CTSS-202ENST00000448301 PKD1L3Q7Z443 1732 aa18.81■□□□□ 0.6
CTSS-202ENST00000448301 FAM98CQ17RN3 349 aaKnown RBP18.81■□□□□ 0.6
CTSS-202ENST00000448301 USHBP1Q8N6Y0 703 aa18.81■□□□□ 0.6
CTSS-202ENST00000448301 CDCA7Q9BWT1 371 aaPredicted RBP18.81■□□□□ 0.6
CTSS-202ENST00000448301 NUDCQ9Y266 331 aa18.81■□□□□ 0.6
CTSS-202ENST00000448301 SHANK3Q9BYB0 1731 aa18.8■□□□□ 0.6
CTSS-202ENST00000448301 MEGF6O75095 1541 aa18.8■□□□□ 0.6
CTSS-202ENST00000448301 RGS12O14924 1447 aa18.8■□□□□ 0.6
CTSS-202ENST00000448301 PLEKHG2Q9H7P9 1386 aa18.79■□□□□ 0.6
CTSS-202ENST00000448301 IL2RBP14784 551 aa18.79■□□□□ 0.6
CTSS-202ENST00000448301 OVOS2A0A0G2JMS6 1433 aa18.78■□□□□ 0.6
CTSS-202ENST00000448301 U2SURPO15042 1029 aaKnown RBP18.78■□□□□ 0.6
CTSS-202ENST00000448301 SULT6B1Q6IMI4 303 aa18.77■□□□□ 0.6
CTSS-202ENST00000448301 TNS2Q63HR2 1409 aa18.77■□□□□ 0.59
CTSS-202ENST00000448301 RAPGEF4Q8WZA2 1011 aa18.76■□□□□ 0.59
CTSS-202ENST00000448301 CCDC184Q52MB2 194 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms