RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 ARHGAP31Q2M1Z3 1444 aa16.12■□□□□ 0.17
SHC1-210ENST00000448116 CYB5RLQ6IPT4 315 aa16.12■□□□□ 0.17
SHC1-210ENST00000448116 C8orf58Q8NAV2 365 aa16.12■□□□□ 0.17
SHC1-210ENST00000448116 PNPLA6Q8IY17 1366 aa16.12■□□□□ 0.17
SHC1-210ENST00000448116 FAM43AQ8N2R8 423 aa16.11■□□□□ 0.17
SHC1-210ENST00000448116 APBB1O00213 710 aa16.11■□□□□ 0.17
SHC1-210ENST00000448116 NEO1Q92859 1461 aa16.11■□□□□ 0.17
SHC1-210ENST00000448116 DIP2CQ9Y2E4 1556 aa16.11■□□□□ 0.17
SHC1-210ENST00000448116 XRCC6P12956 609 aaKnown RBP eCLIP16.11■□□□□ 0.17
SHC1-210ENST00000448116 PANK2Q9BZ23 570 aa16.11■□□□□ 0.17
SHC1-210ENST00000448116 NUTM2FA1L443 756 aa16.1■□□□□ 0.17
SHC1-210ENST00000448116 SOX12O15370 315 aa16.1■□□□□ 0.17
SHC1-210ENST00000448116 COG3Q96JB2 828 aa16.1■□□□□ 0.17
SHC1-210ENST00000448116 GCC1Q96CN9 775 aa16.1■□□□□ 0.17
SHC1-210ENST00000448116 RBM42Q9BTD8 480 aaKnown RBP16.1■□□□□ 0.17
SHC1-210ENST00000448116 CHMP4BQ9H444 224 aaKnown RBP16.1■□□□□ 0.17
SHC1-210ENST00000448116 BMP2KLQ5H9B9 411 aa16.1■□□□□ 0.17
SHC1-210ENST00000448116 DHX37Q8IY37 1157 aaKnown RBP16.1■□□□□ 0.17
SHC1-210ENST00000448116 IL13P35225 146 aa16.09■□□□□ 0.17
SHC1-210ENST00000448116 PPIP5K1Q6PFW1 1433 aa16.09■□□□□ 0.17
SHC1-210ENST00000448116 SIRT2Q8IXJ6 389 aa16.09■□□□□ 0.17
SHC1-210ENST00000448116 ZNF428Q96B54 188 aa16.09■□□□□ 0.17
SHC1-210ENST00000448116 IFT57Q9NWB7 429 aa16.09■□□□□ 0.17
SHC1-210ENST00000448116 RBM25P49756 843 aaKnown RBP16.09■□□□□ 0.17
SHC1-210ENST00000448116 TBC1D9Q6ZT07 1266 aa16.09■□□□□ 0.17
SHC1-210ENST00000448116 PAXIP1Q6ZW49 1069 aaPredicted RBP16.08■□□□□ 0.16
SHC1-210ENST00000448116 LRRC7Q96NW7 1537 aa16.08■□□□□ 0.16
SHC1-210ENST00000448116 WASLO00401 505 aaPredicted RBP16.07■□□□□ 0.16
SHC1-210ENST00000448116 FAM69CQ0P6D2 419 aa16.07■□□□□ 0.16
SHC1-210ENST00000448116 FAM135BQ49AJ0 1406 aa16.07■□□□□ 0.16
SHC1-210ENST00000448116 KRT24Q2M2I5 525 aa16.07■□□□□ 0.16
SHC1-210ENST00000448116 NUDT16Q96DE0 195 aaKnown RBP16.07■□□□□ 0.16
SHC1-210ENST00000448116 MYO5BQ9ULV0 1848 aa16.07■□□□□ 0.16
SHC1-210ENST00000448116 ARHGEF40Q8TER5 1519 aa16.06■□□□□ 0.16
SHC1-210ENST00000448116 TNPO1Q92973 898 aaKnown RBP16.06■□□□□ 0.16
SHC1-210ENST00000448116 MED14O60244 1454 aa16.06■□□□□ 0.16
SHC1-210ENST00000448116 DDX11L8A8MPP1 907 aa16.06■□□□□ 0.16
SHC1-210ENST00000448116 CD2BP2O95400 341 aaKnown RBP16.06■□□□□ 0.16
SHC1-210ENST00000448116 ARHGAP45Q92619 1136 aa16.06■□□□□ 0.16
SHC1-210ENST00000448116 CFAP44Q96MT7 982 aa16.06■□□□□ 0.16
SHC1-210ENST00000448116 API5Q9BZZ5 524 aaKnown RBP16.06■□□□□ 0.16
SHC1-210ENST00000448116 RRAGDQ9NQL2 400 aaPredicted RBP16.06■□□□□ 0.16
SHC1-210ENST00000448116 ALKQ9UM73 1620 aa16.05■□□□□ 0.16
SHC1-210ENST00000448116 LMOD3Q0VAK6 560 aa16.05■□□□□ 0.16
SHC1-210ENST00000448116 AEBP1Q8IUX7 1158 aa16.05■□□□□ 0.16
SHC1-210ENST00000448116 ZNF692Q9BU19 519 aaPredicted RBP16.05■□□□□ 0.16
SHC1-210ENST00000448116 C16orf71Q8IYS4 520 aaPredicted RBP16.04■□□□□ 0.16
SHC1-210ENST00000448116 SULT6B1Q6IMI4 303 aa16.04■□□□□ 0.16
SHC1-210ENST00000448116 SNX21Q969T3 373 aa16.04■□□□□ 0.16
SHC1-210ENST00000448116 TMEM131LA2VDJ0 1609 aa16.03■□□□□ 0.16
SHC1-210ENST00000448116 BRPF1P55201 1214 aaPredicted RBP16.03■□□□□ 0.16
SHC1-210ENST00000448116 ESF1Q9H501 851 aaKnown RBP16.03■□□□□ 0.16
SHC1-210ENST00000448116 ZNF853P0CG23 659 aa16.03■□□□□ 0.16
SHC1-210ENST00000448116 GBP4Q96PP9 640 aa16.03■□□□□ 0.16
SHC1-210ENST00000448116 CCDC61Q9Y6R9 512 aa16.03■□□□□ 0.16
SHC1-210ENST00000448116 MCM10Q7L590 875 aa16.03■□□□□ 0.16
SHC1-210ENST00000448116 CDC45O75419 566 aa16.02■□□□□ 0.16
SHC1-210ENST00000448116 KIF2CQ99661 725 aa16.02■□□□□ 0.16
SHC1-210ENST00000448116 FSD2A1L4K1 749 aa16.02■□□□□ 0.15
SHC1-210ENST00000448116 ABCC4O15439 1325 aa16.01■□□□□ 0.15
SHC1-210ENST00000448116 RIMS2Q9UQ26 1411 aa16.01■□□□□ 0.15
SHC1-210ENST00000448116 K7ELQ4 463 aaPredicted RBP16.01■□□□□ 0.15
SHC1-210ENST00000448116 GLIPR1L2Q4G1C9 344 aa16.01■□□□□ 0.15
SHC1-210ENST00000448116 SMARCA5O60264 1052 aaPredicted RBP16■□□□□ 0.15
SHC1-210ENST00000448116 MIS18AQ9NYP9 233 aa16■□□□□ 0.15
SHC1-210ENST00000448116 PREX1Q8TCU6 1659 aa16■□□□□ 0.15
SHC1-210ENST00000448116 GSPT1P15170 499 aaKnown RBP16■□□□□ 0.15
SHC1-210ENST00000448116 MRE11P49959 708 aa16■□□□□ 0.15
SHC1-210ENST00000448116 OTUD7AQ8TE49 926 aaPredicted RBP16■□□□□ 0.15
SHC1-210ENST00000448116 PLEKHM2Q8IWE5 1019 aa15.99■□□□□ 0.15
SHC1-210ENST00000448116 GAS2L2Q8NHY3 880 aa15.99■□□□□ 0.15
SHC1-210ENST00000448116 GRPEL1Q9HAV7 217 aa15.99■□□□□ 0.15
SHC1-210ENST00000448116 SSFA2P28290 1259 aa15.99■□□□□ 0.15
SHC1-210ENST00000448116 METP08581 1390 aa15.99■□□□□ 0.15
SHC1-210ENST00000448116 SLC4A10Q6U841 1118 aa15.99■□□□□ 0.15
SHC1-210ENST00000448116 PTCH1Q13635 1447 aa15.98■□□□□ 0.15
SHC1-210ENST00000448116 EDC4Q6P2E9 1401 aaKnown RBP15.98■□□□□ 0.15
SHC1-210ENST00000448116 CIZ1Q9ULV3 898 aaPredicted RBP15.98■□□□□ 0.15
SHC1-210ENST00000448116 RAB3GAP1Q15042 981 aa15.98■□□□□ 0.15
SHC1-210ENST00000448116 DDIT3P35638 169 aa15.97■□□□□ 0.15
SHC1-210ENST00000448116 EIF4A2Q14240 407 aaKnown RBP15.97■□□□□ 0.15
SHC1-210ENST00000448116 ATP7BP35670 1465 aa15.97■□□□□ 0.15
SHC1-210ENST00000448116 DCTPP1Q9H773 170 aa15.97■□□□□ 0.15
SHC1-210ENST00000448116 NCLP19338 710 aaKnown RBP15.96■□□□□ 0.15
SHC1-210ENST00000448116 MAP2P11137 1827 aaKnown RBP15.96■□□□□ 0.15
SHC1-210ENST00000448116 HSP90AB2PQ58FF8 381 aa15.96■□□□□ 0.14
SHC1-210ENST00000448116 PIK3R4Q99570 1358 aa15.96■□□□□ 0.14
SHC1-210ENST00000448116 MEIS3Q99687 375 aa15.95■□□□□ 0.14
SHC1-210ENST00000448116 ANKRD26Q9UPS8 1709 aa15.95■□□□□ 0.14
SHC1-210ENST00000448116 SLC4A2P04920 1241 aa15.95■□□□□ 0.14
SHC1-210ENST00000448116 A2ML1A8K2U0 1454 aa15.95■□□□□ 0.14
SHC1-210ENST00000448116 GOLGA6L22H0YM25 854 aa15.95■□□□□ 0.14
SHC1-210ENST00000448116 TTC22Q5TAA0 569 aa15.95■□□□□ 0.14
SHC1-210ENST00000448116 GAS2L3Q86XJ1 694 aa15.95■□□□□ 0.14
SHC1-210ENST00000448116 RICTORQ6R327 1708 aa15.94■□□□□ 0.14
SHC1-210ENST00000448116 NAP1L5Q96NT1 182 aaPredicted RBP15.94■□□□□ 0.14
SHC1-210ENST00000448116 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.94■□□□□ 0.14
SHC1-210ENST00000448116 CPSF1Q10570 1443 aaKnown RBP15.94■□□□□ 0.14
SHC1-210ENST00000448116 KIF20BQ96Q89 1820 aa15.94■□□□□ 0.14
SHC1-210ENST00000448116 ANKRD44Q8N8A2 993 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms