RNA–Protein interactions for RNA: ENST00000447632.6

TTC39A-212, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-212ENST00000447632 OVOS2Q6IE36 1432 aa11.44□□□□□ -0.58
TTC39A-212ENST00000447632 AHDC1Q5TGY3 1603 aaPredicted RBP11.44□□□□□ -0.58
TTC39A-212ENST00000447632 CSB-PGBD3P0DP91 1061 aa11.43□□□□□ -0.58
TTC39A-212ENST00000447632 HOXC9P31274 260 aa11.43□□□□□ -0.58
TTC39A-212ENST00000447632 AKAP12Q02952 1782 aa11.43□□□□□ -0.58
TTC39A-212ENST00000447632 COL16A1Q07092 1604 aaPredicted RBP11.42□□□□□ -0.58
TTC39A-212ENST00000447632 NSD2O96028 1365 aa11.42□□□□□ -0.58
TTC39A-212ENST00000447632 PARD3Q8TEW0 1356 aa11.42□□□□□ -0.58
TTC39A-212ENST00000447632 CCDC9Q9Y3X0 531 aaKnown RBP11.42□□□□□ -0.58
TTC39A-212ENST00000447632 NHSL1Q5SYE7 1610 aa11.42□□□□□ -0.58
TTC39A-212ENST00000447632 PIK3C2AO00443 1686 aa11.42□□□□□ -0.58
TTC39A-212ENST00000447632 NPC1L1Q9UHC9 1359 aa11.42□□□□□ -0.58
TTC39A-212ENST00000447632 U2SURPO15042 1029 aaKnown RBP11.42□□□□□ -0.58
TTC39A-212ENST00000447632 MYBBP1AQ9BQG0 1328 aaKnown RBP11.42□□□□□ -0.58
TTC39A-212ENST00000447632 MED1Q15648 1581 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-212ENST00000447632 MON2Q7Z3U7 1717 aa11.41□□□□□ -0.58
TTC39A-212ENST00000447632 USHBP1Q8N6Y0 703 aa11.41□□□□□ -0.58
TTC39A-212ENST00000447632 IP6K1Q92551 441 aa11.41□□□□□ -0.58
TTC39A-212ENST00000447632 TRPM3Q9HCF6 1732 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-212ENST00000447632 SPATA31A6Q5VVP1 1343 aa11.41□□□□□ -0.58
TTC39A-212ENST00000447632 NLRP2Q9NX02 1062 aa11.4□□□□□ -0.58
TTC39A-212ENST00000447632 LARP1Q6PKG0 1096 aaKnown RBP11.4□□□□□ -0.58
TTC39A-212ENST00000447632 ANKRD24Q8TF21 1146 aa11.4□□□□□ -0.58
TTC39A-212ENST00000447632 HMOX1P09601 288 aa11.39□□□□□ -0.59
TTC39A-212ENST00000447632 EIF4A2Q14240 407 aaKnown RBP11.39□□□□□ -0.59
TTC39A-212ENST00000447632 TOM1L2Q6ZVM7 507 aa11.39□□□□□ -0.59
TTC39A-212ENST00000447632 USP21Q9UK80 565 aa11.39□□□□□ -0.59
TTC39A-212ENST00000447632 CFAP53Q96M91 514 aa11.39□□□□□ -0.59
TTC39A-212ENST00000447632 NRKQ7Z2Y5 1582 aa11.39□□□□□ -0.59
TTC39A-212ENST00000447632 DIAPH1O60610 1272 aaKnown RBP11.38□□□□□ -0.59
TTC39A-212ENST00000447632 NBPF6Q5VWK0 638 aa11.38□□□□□ -0.59
TTC39A-212ENST00000447632 NBPF4Q96M43 638 aa11.38□□□□□ -0.59
TTC39A-212ENST00000447632 ALS2Q96Q42 1657 aa11.38□□□□□ -0.59
TTC39A-212ENST00000447632 U2AF1L5P0DN76 240 aaPredicted RBP11.38□□□□□ -0.59
TTC39A-212ENST00000447632 U2AF1Q01081 240 aaKnown RBP eCLIP11.38□□□□□ -0.59
TTC39A-212ENST00000447632 AFF2P51816 1311 aa11.38□□□□□ -0.59
TTC39A-212ENST00000447632 LRP6O75581 1613 aa11.37□□□□□ -0.59
TTC39A-212ENST00000447632 AATKQ6ZMQ8 1374 aa11.37□□□□□ -0.59
TTC39A-212ENST00000447632 EYA1Q99502 592 aa11.37□□□□□ -0.59
TTC39A-212ENST00000447632 AEBP1Q8IUX7 1158 aa11.36□□□□□ -0.59
TTC39A-212ENST00000447632 FLT4P35916 1363 aa11.36□□□□□ -0.59
TTC39A-212ENST00000447632 EIF5BO60841 1220 aaKnown RBP11.36□□□□□ -0.59
TTC39A-212ENST00000447632 IL13P35225 146 aa11.36□□□□□ -0.59
TTC39A-212ENST00000447632 PHF23Q9BUL5 403 aaPredicted RBP11.36□□□□□ -0.59
TTC39A-212ENST00000447632 SULT6B1Q6IMI4 303 aa11.35□□□□□ -0.59
TTC39A-212ENST00000447632 QTRT2Q9H974 415 aaKnown RBP11.35□□□□□ -0.59
TTC39A-212ENST00000447632 ADAMTS8Q9UP79 889 aa11.35□□□□□ -0.59
TTC39A-212ENST00000447632 CPDO75976 1380 aa11.35□□□□□ -0.59
TTC39A-212ENST00000447632 A0A0G2JS52 829 aa11.35□□□□□ -0.59
TTC39A-212ENST00000447632 UNC5CLQ8IV45 518 aa11.35□□□□□ -0.59
TTC39A-212ENST00000447632 CCDC146Q8IYE0 955 aa11.35□□□□□ -0.59
TTC39A-212ENST00000447632 ERBB3P21860 1342 aa11.34□□□□□ -0.59
TTC39A-212ENST00000447632 SMG6Q86US8 1419 aaKnown RBP11.34□□□□□ -0.59
TTC39A-212ENST00000447632 NFAT5O94916 1531 aa11.34□□□□□ -0.59
TTC39A-212ENST00000447632 WDR43Q15061 677 aaKnown RBP eCLIP11.34□□□□□ -0.59
TTC39A-212ENST00000447632 FNBP4Q8N3X1 1017 aaPredicted RBP11.34□□□□□ -0.59
TTC39A-212ENST00000447632 NUDCQ9Y266 331 aa11.34□□□□□ -0.59
TTC39A-212ENST00000447632 SALL2Q9Y467 1007 aaPredicted RBP11.34□□□□□ -0.59
TTC39A-212ENST00000447632 SLIT3O75094 1523 aa11.34□□□□□ -0.59
TTC39A-212ENST00000447632 INSRP06213 1382 aa11.33□□□□□ -0.6
TTC39A-212ENST00000447632 CAMTA1Q9Y6Y1 1673 aa11.33□□□□□ -0.6
TTC39A-212ENST00000447632 KIF20BQ96Q89 1820 aa11.33□□□□□ -0.6
TTC39A-212ENST00000447632 PNISRQ8TF01 805 aaKnown RBP11.33□□□□□ -0.6
TTC39A-212ENST00000447632 FAM98CQ17RN3 349 aaKnown RBP11.32□□□□□ -0.6
TTC39A-212ENST00000447632 RGS17Q9UGC6 210 aaPredicted RBP11.32□□□□□ -0.6
TTC39A-212ENST00000447632 RNF123Q5XPI4 1314 aa11.32□□□□□ -0.6
TTC39A-212ENST00000447632 NEUROD2Q15784 382 aa11.32□□□□□ -0.6
TTC39A-212ENST00000447632 WDR17Q8IZU2 1322 aa11.31□□□□□ -0.6
TTC39A-212ENST00000447632 MAP2P11137 1827 aaKnown RBP11.31□□□□□ -0.6
TTC39A-212ENST00000447632 MARF1Q9Y4F3 1742 aaKnown RBP11.31□□□□□ -0.6
TTC39A-212ENST00000447632 BCL9LQ86UU0 1499 aa11.3□□□□□ -0.6
TTC39A-212ENST00000447632 PRKAR2BP31323 418 aa11.3□□□□□ -0.6
TTC39A-212ENST00000447632 POTEAQ6S8J7 498 aa11.3□□□□□ -0.6
TTC39A-212ENST00000447632 PHACTR3Q96KR7 559 aa11.3□□□□□ -0.6
TTC39A-212ENST00000447632 RRP7AQ9Y3A4 280 aaKnown RBP11.3□□□□□ -0.6
TTC39A-212ENST00000447632 FAM182BQ5T319 152 aa11.29□□□□□ -0.6
TTC39A-212ENST00000447632 GJD4Q96KN9 370 aaPredicted RBP11.29□□□□□ -0.6
TTC39A-212ENST00000447632 TRPC5Q9UL62 973 aaPredicted RBP11.29□□□□□ -0.6
TTC39A-212ENST00000447632 PEAK1Q9H792 1746 aa11.29□□□□□ -0.6
TTC39A-212ENST00000447632 TCP11L2Q8N4U5 519 aa11.28□□□□□ -0.6
TTC39A-212ENST00000447632 DDX54Q8TDD1 881 aaKnown RBP11.28□□□□□ -0.6
TTC39A-212ENST00000447632 RAPGEF4Q8WZA2 1011 aa11.28□□□□□ -0.6
TTC39A-212ENST00000447632 CARD10Q9BWT7 1032 aa11.28□□□□□ -0.6
TTC39A-212ENST00000447632 PHRF1Q9P1Y6 1649 aaKnown RBP11.28□□□□□ -0.6
TTC39A-212ENST00000447632 COL5A2P05997 1499 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-212ENST00000447632 VPS72Q15906 364 aa11.28□□□□□ -0.6
TTC39A-212ENST00000447632 SHPRHQ149N8 1683 aa11.28□□□□□ -0.6
TTC39A-212ENST00000447632 RTL1A6NKG5 1358 aa11.28□□□□□ -0.6
TTC39A-212ENST00000447632 COL22A1Q8NFW1 1626 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-212ENST00000447632 ZNF772Q68DY9 489 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-212ENST00000447632 SPATA31A1Q5TZJ5 1347 aa11.27□□□□□ -0.6
TTC39A-212ENST00000447632 SPATA31A5Q5VU36 1347 aa11.27□□□□□ -0.6
TTC39A-212ENST00000447632 SPATA31A7Q8IWB4 1347 aa11.27□□□□□ -0.6
TTC39A-212ENST00000447632 BLMP54132 1417 aaPredicted RBP11.27□□□□□ -0.6
TTC39A-212ENST00000447632 SLIT2O94813 1529 aa11.27□□□□□ -0.61
TTC39A-212ENST00000447632 CCDC136Q96JN2 1154 aa11.27□□□□□ -0.61
TTC39A-212ENST00000447632 KIF24Q5T7B8 1368 aa11.27□□□□□ -0.61
TTC39A-212ENST00000447632 CDK12Q9NYV4 1490 aaPredicted RBP11.27□□□□□ -0.61
TTC39A-212ENST00000447632 IGSF1Q8N6C5 1336 aa11.27□□□□□ -0.61
TTC39A-212ENST00000447632 IL2RBP14784 551 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms