RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 MORC1Q86VD1 984 aa18.13■□□□□ 0.49
HLA-DOB-207ENST00000447394 FNBP4Q8N3X1 1017 aaPredicted RBP18.13■□□□□ 0.49
HLA-DOB-207ENST00000447394 USP21Q9UK80 565 aa18.13■□□□□ 0.49
HLA-DOB-207ENST00000447394 AXIN2Q9Y2T1 843 aa18.13■□□□□ 0.49
HLA-DOB-207ENST00000447394 EMILIN1Q9Y6C2 1016 aa18.13■□□□□ 0.49
HLA-DOB-207ENST00000447394 AATKQ6ZMQ8 1374 aa18.13■□□□□ 0.49
HLA-DOB-207ENST00000447394 GLI3P10071 1580 aa18.12■□□□□ 0.49
HLA-DOB-207ENST00000447394 WNK3Q9BYP7 1800 aa18.12■□□□□ 0.49
HLA-DOB-207ENST00000447394 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
HLA-DOB-207ENST00000447394 NPC1L1Q9UHC9 1359 aa18.11■□□□□ 0.49
HLA-DOB-207ENST00000447394 ATRNO75882 1429 aa18.1■□□□□ 0.49
HLA-DOB-207ENST00000447394 POTEAQ6S8J7 498 aa18.1■□□□□ 0.49
HLA-DOB-207ENST00000447394 UNC5CLQ8IV45 518 aa18.09■□□□□ 0.49
HLA-DOB-207ENST00000447394 FAM208AQ9UK61 1670 aaKnown RBP18.09■□□□□ 0.49
HLA-DOB-207ENST00000447394 SMG6Q86US8 1419 aaKnown RBP18.08■□□□□ 0.49
HLA-DOB-207ENST00000447394 RTL1A6NKG5 1358 aa18.07■□□□□ 0.48
HLA-DOB-207ENST00000447394 PPM1GO15355 546 aaPredicted RBP18.07■□□□□ 0.48
HLA-DOB-207ENST00000447394 HOXC9P31274 260 aa18.07■□□□□ 0.48
HLA-DOB-207ENST00000447394 AMPHP49418 695 aa18.07■□□□□ 0.48
HLA-DOB-207ENST00000447394 POLKQ9UBT6 870 aa18.07■□□□□ 0.48
HLA-DOB-207ENST00000447394 ZNF772Q68DY9 489 aaPredicted RBP18.06■□□□□ 0.48
HLA-DOB-207ENST00000447394 LARP1Q6PKG0 1096 aaKnown RBP18.06■□□□□ 0.48
HLA-DOB-207ENST00000447394 LTV1Q96GA3 475 aaPredicted RBP18.06■□□□□ 0.48
HLA-DOB-207ENST00000447394 BLMP54132 1417 aaPredicted RBP18.06■□□□□ 0.48
HLA-DOB-207ENST00000447394 HSP90AB2PQ58FF8 381 aa18.05■□□□□ 0.48
HLA-DOB-207ENST00000447394 IP6K1Q92551 441 aa18.05■□□□□ 0.48
HLA-DOB-207ENST00000447394 QTRT2Q9H974 415 aaKnown RBP18.05■□□□□ 0.48
HLA-DOB-207ENST00000447394 CDK12Q9NYV4 1490 aaPredicted RBP18.05■□□□□ 0.48
HLA-DOB-207ENST00000447394 BRWD3Q6RI45 1802 aa18.05■□□□□ 0.48
HLA-DOB-207ENST00000447394 FLT4P35916 1363 aa18.04■□□□□ 0.48
HLA-DOB-207ENST00000447394 PARD3Q8TEW0 1356 aa18.04■□□□□ 0.48
HLA-DOB-207ENST00000447394 ANKRD24Q8TF21 1146 aa18.04■□□□□ 0.48
HLA-DOB-207ENST00000447394 CCDC9Q9Y3X0 531 aaKnown RBP18.04■□□□□ 0.48
HLA-DOB-207ENST00000447394 ERBB3P21860 1342 aa18.03■□□□□ 0.48
HLA-DOB-207ENST00000447394 EVA1CP58658 441 aa18.03■□□□□ 0.48
HLA-DOB-207ENST00000447394 VPS72Q15906 364 aa18.03■□□□□ 0.48
HLA-DOB-207ENST00000447394 TRPC5Q9UL62 973 aaPredicted RBP18.03■□□□□ 0.48
HLA-DOB-207ENST00000447394 CRB1P82279 1406 aa18.02■□□□□ 0.48
HLA-DOB-207ENST00000447394 USP35Q9P2H5 1018 aa18.02■□□□□ 0.48
HLA-DOB-207ENST00000447394 INSRP06213 1382 aa18.02■□□□□ 0.47
HLA-DOB-207ENST00000447394 WDR17Q8IZU2 1322 aa18.01■□□□□ 0.47
HLA-DOB-207ENST00000447394 CSB-PGBD3P0DP91 1061 aa18.01■□□□□ 0.47
HLA-DOB-207ENST00000447394 THSD7AQ9UPZ6 1657 aa18.01■□□□□ 0.47
HLA-DOB-207ENST00000447394 COL3A1P02461 1466 aaPredicted RBP18.01■□□□□ 0.47
HLA-DOB-207ENST00000447394 RGPD1P0DJD0 1748 aa18.01■□□□□ 0.47
HLA-DOB-207ENST00000447394 SPATA31A5Q5VU36 1347 aa18■□□□□ 0.47
HLA-DOB-207ENST00000447394 SPATA31A7Q8IWB4 1347 aa18■□□□□ 0.47
HLA-DOB-207ENST00000447394 RGS12O14924 1447 aa18■□□□□ 0.47
HLA-DOB-207ENST00000447394 PPP2R1AP30153 589 aa18■□□□□ 0.47
HLA-DOB-207ENST00000447394 MTHFSP49914 203 aa18■□□□□ 0.47
HLA-DOB-207ENST00000447394 KIF24Q5T7B8 1368 aa18■□□□□ 0.47
HLA-DOB-207ENST00000447394 SPATA31A1Q5TZJ5 1347 aa17.99■□□□□ 0.47
HLA-DOB-207ENST00000447394 LRRC37A3O60309 1634 aa17.99■□□□□ 0.47
HLA-DOB-207ENST00000447394 TOM1L2Q6ZVM7 507 aa17.99■□□□□ 0.47
HLA-DOB-207ENST00000447394 GJD4Q96KN9 370 aaPredicted RBP17.99■□□□□ 0.47
HLA-DOB-207ENST00000447394 USHBP1Q8N6Y0 703 aa17.98■□□□□ 0.47
HLA-DOB-207ENST00000447394 NLRP2Q9NX02 1062 aa17.97■□□□□ 0.47
HLA-DOB-207ENST00000447394 PARP4Q9UKK3 1724 aaKnown RBP17.97■□□□□ 0.47
HLA-DOB-207ENST00000447394 RXRBP28702 533 aa17.96■□□□□ 0.47
HLA-DOB-207ENST00000447394 RBM6P78332 1123 aaKnown RBP17.96■□□□□ 0.47
HLA-DOB-207ENST00000447394 EIF4A2Q14240 407 aaKnown RBP17.96■□□□□ 0.47
HLA-DOB-207ENST00000447394 FAM98CQ17RN3 349 aaKnown RBP17.96■□□□□ 0.47
HLA-DOB-207ENST00000447394 SHANK3Q9BYB0 1731 aa17.95■□□□□ 0.46
HLA-DOB-207ENST00000447394 NBPF6Q5VWK0 638 aa17.94■□□□□ 0.46
HLA-DOB-207ENST00000447394 ILDR2Q71H61 639 aa17.94■□□□□ 0.46
HLA-DOB-207ENST00000447394 NBPF4Q96M43 638 aa17.94■□□□□ 0.46
HLA-DOB-207ENST00000447394 PRKRIP1Q9H875 184 aaPredicted RBP17.94■□□□□ 0.46
HLA-DOB-207ENST00000447394 DISP2A7MBM2 1401 aa17.93■□□□□ 0.46
HLA-DOB-207ENST00000447394 TCP11L2Q8N4U5 519 aa17.93■□□□□ 0.46
HLA-DOB-207ENST00000447394 CARD10Q9BWT7 1032 aa17.93■□□□□ 0.46
HLA-DOB-207ENST00000447394 MEGF6O75095 1541 aa17.93■□□□□ 0.46
HLA-DOB-207ENST00000447394 A0A0G2JS52 829 aa17.92■□□□□ 0.46
HLA-DOB-207ENST00000447394 MYT1Q01538 1121 aa17.92■□□□□ 0.46
HLA-DOB-207ENST00000447394 RALBP1Q15311 655 aa17.92■□□□□ 0.46
HLA-DOB-207ENST00000447394 EYA1Q99502 592 aa17.91■□□□□ 0.46
HLA-DOB-207ENST00000447394 MYBBP1AQ9BQG0 1328 aaKnown RBP17.91■□□□□ 0.46
HLA-DOB-207ENST00000447394 NCAPD2Q15021 1401 aa17.9■□□□□ 0.46
HLA-DOB-207ENST00000447394 IL13P35225 146 aa17.9■□□□□ 0.46
HLA-DOB-207ENST00000447394 PKD1L3Q7Z443 1732 aa17.89■□□□□ 0.46
HLA-DOB-207ENST00000447394 SEPT12Q8IYM1 358 aa17.89■□□□□ 0.45
HLA-DOB-207ENST00000447394 BARGINQ6ZT62 677 aa17.88■□□□□ 0.45
HLA-DOB-207ENST00000447394 AEBP1Q8IUX7 1158 aa17.88■□□□□ 0.45
HLA-DOB-207ENST00000447394 DIAPH1O60610 1272 aaKnown RBP17.87■□□□□ 0.45
HLA-DOB-207ENST00000447394 THRAP3Q9Y2W1 955 aaKnown RBP17.87■□□□□ 0.45
HLA-DOB-207ENST00000447394 IGSF1Q8N6C5 1336 aa17.87■□□□□ 0.45
HLA-DOB-207ENST00000447394 ONECUT3O60422 494 aaPredicted RBP17.86■□□□□ 0.45
HLA-DOB-207ENST00000447394 ANP32CO43423 234 aa17.85■□□□□ 0.45
HLA-DOB-207ENST00000447394 IL2RBP14784 551 aa17.85■□□□□ 0.45
HLA-DOB-207ENST00000447394 CCDC184Q52MB2 194 aa17.85■□□□□ 0.45
HLA-DOB-207ENST00000447394 FAM182BQ5T319 152 aa17.85■□□□□ 0.45
HLA-DOB-207ENST00000447394 TNS2Q63HR2 1409 aa17.85■□□□□ 0.45
HLA-DOB-207ENST00000447394 CFAP53Q96M91 514 aa17.85■□□□□ 0.45
HLA-DOB-207ENST00000447394 OVOS2A0A0G2JMS6 1433 aa17.84■□□□□ 0.45
HLA-DOB-207ENST00000447394 U2SURPO15042 1029 aaKnown RBP17.84■□□□□ 0.45
HLA-DOB-207ENST00000447394 HMOX1P09601 288 aa17.84■□□□□ 0.45
HLA-DOB-207ENST00000447394 VIRMAQ69YN4 1812 aaKnown RBP17.83■□□□□ 0.44
HLA-DOB-207ENST00000447394 SBF2Q86WG5 1849 aa17.82■□□□□ 0.44
HLA-DOB-207ENST00000447394 SULT6B1Q6IMI4 303 aa17.82■□□□□ 0.44
HLA-DOB-207ENST00000447394 DOT1LQ8TEK3 1739 aa17.81■□□□□ 0.44
HLA-DOB-207ENST00000447394 KDRP35968 1356 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms