RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 C22orf23Q9BZE7 217 aa8.44□□□□□ -1.06
CDK12-202ENST00000447079 HDGFL1Q5TGJ6 251 aa8.44□□□□□ -1.06
CDK12-202ENST00000447079 TOM1L2Q6ZVM7 507 aa8.44□□□□□ -1.06
CDK12-202ENST00000447079 MRE11P49959 708 aa8.44□□□□□ -1.06
CDK12-202ENST00000447079 CCDC158Q5M9N0 1113 aa8.44□□□□□ -1.06
CDK12-202ENST00000447079 CCDC43Q96MW1 224 aaKnown RBP8.44□□□□□ -1.06
CDK12-202ENST00000447079 ABCC2Q92887 1545 aa8.44□□□□□ -1.06
CDK12-202ENST00000447079 ARHGEF12Q9NZN5 1544 aa8.44□□□□□ -1.06
CDK12-202ENST00000447079 TTC21BQ7Z4L5 1316 aa8.44□□□□□ -1.06
CDK12-202ENST00000447079 TCOF1Q13428 1488 aaKnown RBP8.44□□□□□ -1.06
CDK12-202ENST00000447079 ASXL2Q76L83 1435 aa8.43□□□□□ -1.06
CDK12-202ENST00000447079 AIMP1Q12904 312 aaKnown RBP8.43□□□□□ -1.06
CDK12-202ENST00000447079 SF3B2Q13435 895 aaKnown RBP8.43□□□□□ -1.06
CDK12-202ENST00000447079 SLC12A5Q9H2X9 1139 aa8.43□□□□□ -1.06
CDK12-202ENST00000447079 SULT6B1Q6IMI4 303 aa8.43□□□□□ -1.06
CDK12-202ENST00000447079 NUDT16Q96DE0 195 aaKnown RBP8.43□□□□□ -1.06
CDK12-202ENST00000447079 NEUROD6Q96NK8 337 aa8.43□□□□□ -1.06
CDK12-202ENST00000447079 DHX8Q14562 1220 aaKnown RBP8.43□□□□□ -1.06
CDK12-202ENST00000447079 ZNF530Q6P9A1 599 aaPredicted RBP8.43□□□□□ -1.06
CDK12-202ENST00000447079 NUTM2GQ5VZR2 741 aa8.43□□□□□ -1.06
CDK12-202ENST00000447079 NFKBIBQ15653 356 aa8.43□□□□□ -1.06
CDK12-202ENST00000447079 NKTRP30414 1462 aaKnown RBP8.43□□□□□ -1.06
CDK12-202ENST00000447079 GNAT3A8MTJ3 354 aa8.43□□□□□ -1.06
CDK12-202ENST00000447079 ATP10BO94823 1461 aa8.43□□□□□ -1.06
CDK12-202ENST00000447079 RABEP1Q15276 862 aa8.42□□□□□ -1.06
CDK12-202ENST00000447079 NFE2L2Q16236 605 aa8.42□□□□□ -1.06
CDK12-202ENST00000447079 WASHC4Q2M389 1173 aa8.42□□□□□ -1.06
CDK12-202ENST00000447079 CCDC73Q6ZRK6 1079 aa8.42□□□□□ -1.06
CDK12-202ENST00000447079 SAMD9Q5K651 1589 aa8.42□□□□□ -1.06
CDK12-202ENST00000447079 LNPKQ9C0E8 428 aa8.42□□□□□ -1.06
CDK12-202ENST00000447079 PRDM11Q9NQV5 511 aa8.42□□□□□ -1.06
CDK12-202ENST00000447079 PES1O00541 588 aaKnown RBP8.42□□□□□ -1.06
CDK12-202ENST00000447079 FSD1Q9BTV5 496 aa8.42□□□□□ -1.06
CDK12-202ENST00000447079 ASXL1Q8IXJ9 1541 aa8.42□□□□□ -1.06
CDK12-202ENST00000447079 ZNF652Q9Y2D9 606 aa8.42□□□□□ -1.06
CDK12-202ENST00000447079 FBXW7Q969H0 707 aa8.42□□□□□ -1.06
CDK12-202ENST00000447079 NUP153P49790 1475 aaKnown RBP8.42□□□□□ -1.06
CDK12-202ENST00000447079 CREBRFQ8IUR6 639 aa8.42□□□□□ -1.06
CDK12-202ENST00000447079 LRRCC1Q9C099 1032 aa8.42□□□□□ -1.06
CDK12-202ENST00000447079 KDM5AP29375 1690 aaKnown RBP8.41□□□□□ -1.06
CDK12-202ENST00000447079 SASS6Q6UVJ0 657 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 ATF7IPQ6VMQ6 1270 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 PANK1Q8TE04 598 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 FOXD4L1Q9NU39 408 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 BTBD11A6QL63 1104 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 STARD3NLO95772 234 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 NACAP1Q9BZK3 213 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 IFT57Q9NWB7 429 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 SURF6O75683 361 aaKnown RBP8.41□□□□□ -1.06
CDK12-202ENST00000447079 BICD2Q8TD16 824 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 CWC22Q9HCG8 908 aaKnown RBP8.41□□□□□ -1.06
CDK12-202ENST00000447079 CWC15Q9P013 229 aaKnown RBP8.41□□□□□ -1.06
CDK12-202ENST00000447079 CCDC27Q2M243 656 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 NBPF8Q3BBV2 869 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 TTC39AQ5SRH9 613 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 IL27Q8NEV9 243 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 STRN4Q9NRL3 753 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 CNNM1Q9NRU3 951 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 ALDH1L2Q3SY69 923 aa8.41□□□□□ -1.06
CDK12-202ENST00000447079 UBE2Q2Q8WVN8 375 aa8.4□□□□□ -1.06
CDK12-202ENST00000447079 NOB1Q9ULX3 412 aaKnown RBP8.4□□□□□ -1.06
CDK12-202ENST00000447079 TNRQ92752 1358 aa8.4□□□□□ -1.06
CDK12-202ENST00000447079 CCDC57Q2TAC2 916 aa8.4□□□□□ -1.06
CDK12-202ENST00000447079 SLC4A3P48751 1232 aa8.4□□□□□ -1.06
CDK12-202ENST00000447079 TAF3Q5VWG9 929 aa8.4□□□□□ -1.06
CDK12-202ENST00000447079 ANKRD36BQ8N2N9 1353 aa8.4□□□□□ -1.06
CDK12-202ENST00000447079 UHRF1BP1LA0JNW5 1464 aa8.4□□□□□ -1.06
CDK12-202ENST00000447079 SLC4A2P04920 1241 aa8.4□□□□□ -1.06
CDK12-202ENST00000447079 TXLNAP40222 546 aa8.4□□□□□ -1.06
CDK12-202ENST00000447079 EXOSC9Q06265 439 aaKnown RBP8.4□□□□□ -1.06
CDK12-202ENST00000447079 MVPQ14764 893 aaKnown RBP8.4□□□□□ -1.06
CDK12-202ENST00000447079 OLFM4Q6UX06 510 aa8.4□□□□□ -1.07
CDK12-202ENST00000447079 SHROOM2Q13796 1616 aa8.4□□□□□ -1.07
CDK12-202ENST00000447079 MBD3O95983 291 aa8.4□□□□□ -1.07
CDK12-202ENST00000447079 ZNF396Q96N95 335 aaPredicted RBP8.39□□□□□ -1.07
CDK12-202ENST00000447079 BRPF3Q9ULD4 1205 aa8.39□□□□□ -1.07
CDK12-202ENST00000447079 NOS1P29475 1434 aa8.39□□□□□ -1.07
CDK12-202ENST00000447079 HMGN5P82970 282 aaKnown RBP8.39□□□□□ -1.07
CDK12-202ENST00000447079 JMYQ8N9B5 988 aa8.39□□□□□ -1.07
CDK12-202ENST00000447079 ARGLU1Q9NWB6 273 aaPredicted RBP8.39□□□□□ -1.07
CDK12-202ENST00000447079 RAB11FIP3O75154 756 aa8.39□□□□□ -1.07
CDK12-202ENST00000447079 AEBP1Q8IUX7 1158 aa8.39□□□□□ -1.07
CDK12-202ENST00000447079 PIP4K2AP48426 406 aaPredicted RBP8.39□□□□□ -1.07
CDK12-202ENST00000447079 RBM42Q9BTD8 480 aaKnown RBP8.39□□□□□ -1.07
CDK12-202ENST00000447079 CCDC39Q9UFE4 941 aa8.39□□□□□ -1.07
CDK12-202ENST00000447079 RAD21O60216 631 aa8.39□□□□□ -1.07
CDK12-202ENST00000447079 CHD1O14646 1710 aa8.38□□□□□ -1.07
CDK12-202ENST00000447079 WASLO00401 505 aaPredicted RBP8.38□□□□□ -1.07
CDK12-202ENST00000447079 CDKL5O76039 1030 aa8.38□□□□□ -1.07
CDK12-202ENST00000447079 KRT32Q14532 448 aa8.38□□□□□ -1.07
CDK12-202ENST00000447079 MPHOSPH8Q99549 860 aa8.38□□□□□ -1.07
CDK12-202ENST00000447079 CTNNA3Q9UI47 895 aa8.38□□□□□ -1.07
CDK12-202ENST00000447079 VPS37CA5D8V6 355 aaPredicted RBP8.38□□□□□ -1.07
CDK12-202ENST00000447079 HSP90AB3PQ58FF7 597 aa8.38□□□□□ -1.07
CDK12-202ENST00000447079 SLC26A8Q96RN1 970 aa8.38□□□□□ -1.07
CDK12-202ENST00000447079 TSPOAP1O95153 1857 aa8.38□□□□□ -1.07
CDK12-202ENST00000447079 TTC21AQ8NDW8 1320 aa8.38□□□□□ -1.07
CDK12-202ENST00000447079 TMPOP42166 694 aaKnown RBP8.37□□□□□ -1.07
CDK12-202ENST00000447079 RPAP2Q8IXW5 612 aaPredicted RBP8.37□□□□□ -1.07
CDK12-202ENST00000447079 R3HCC1Q9Y3T6 440 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms