RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.1■□□□□ 0.33
DDX56-206ENST00000446987 LMO7Q8WWI1 1683 aa17.1■□□□□ 0.33
DDX56-206ENST00000446987 ABTB2Q8N961 1025 aa17.1■□□□□ 0.33
DDX56-206ENST00000446987 NSD3Q9BZ95 1437 aa17.09■□□□□ 0.33
DDX56-206ENST00000446987 NWD2Q9ULI1 1742 aa17.09■□□□□ 0.33
DDX56-206ENST00000446987 PLEKHG5O94827 1062 aa17.09■□□□□ 0.33
DDX56-206ENST00000446987 ADAMTS2O95450 1211 aa17.09■□□□□ 0.33
DDX56-206ENST00000446987 NME9Q86XW9 330 aa17.09■□□□□ 0.33
DDX56-206ENST00000446987 COL14A1Q05707 1796 aaKnown RBP17.09■□□□□ 0.33
DDX56-206ENST00000446987 SLIT2O94813 1529 aa17.08■□□□□ 0.33
DDX56-206ENST00000446987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.08■□□□□ 0.33
DDX56-206ENST00000446987 COL18A1P39060 1754 aa17.08■□□□□ 0.32
DDX56-206ENST00000446987 RRP9O43818 475 aaKnown RBP17.07■□□□□ 0.32
DDX56-206ENST00000446987 ANKRD26Q9UPS8 1709 aa17.07■□□□□ 0.32
DDX56-206ENST00000446987 POLR3GLQ9BT43 218 aa17.07■□□□□ 0.32
DDX56-206ENST00000446987 BCL9LQ86UU0 1499 aa17.06■□□□□ 0.32
DDX56-206ENST00000446987 NLRP6P59044 892 aa17.05■□□□□ 0.32
DDX56-206ENST00000446987 LTN1O94822 1766 aa17.05■□□□□ 0.32
DDX56-206ENST00000446987 NLRP13Q86W25 1043 aa17.05■□□□□ 0.32
DDX56-206ENST00000446987 C8orf37Q96NL8 207 aa17.05■□□□□ 0.32
DDX56-206ENST00000446987 AFF2P51816 1311 aa17.05■□□□□ 0.32
DDX56-206ENST00000446987 CPDO75976 1380 aa17.04■□□□□ 0.32
DDX56-206ENST00000446987 KIAA0232Q92628 1395 aa17.04■□□□□ 0.32
DDX56-206ENST00000446987 MEX3CQ5U5Q3 659 aaKnown RBP17.04■□□□□ 0.32
DDX56-206ENST00000446987 LAS1LQ9Y4W2 734 aaKnown RBP17.04■□□□□ 0.32
DDX56-206ENST00000446987 GCP02774 474 aa17.03■□□□□ 0.32
DDX56-206ENST00000446987 VSIG10Q8N0Z9 540 aa17.03■□□□□ 0.32
DDX56-206ENST00000446987 FNBP4Q8N3X1 1017 aaPredicted RBP17.03■□□□□ 0.32
DDX56-206ENST00000446987 RGPD5Q99666 1765 aa17.02■□□□□ 0.32
DDX56-206ENST00000446987 FAM83GA6ND36 823 aa17.02■□□□□ 0.32
DDX56-206ENST00000446987 FYB1O15117 783 aa17.02■□□□□ 0.32
DDX56-206ENST00000446987 PANK3Q9H999 370 aa17.02■□□□□ 0.32
DDX56-206ENST00000446987 CAMTA1Q9Y6Y1 1673 aa17.01■□□□□ 0.31
DDX56-206ENST00000446987 FRAT1Q92837 279 aaPredicted RBP17.01■□□□□ 0.31
DDX56-206ENST00000446987 BACH2Q9BYV9 841 aa17.01■□□□□ 0.31
DDX56-206ENST00000446987 POTEAQ6S8J7 498 aa17.01■□□□□ 0.31
DDX56-206ENST00000446987 NUDCQ9Y266 331 aa17.01■□□□□ 0.31
DDX56-206ENST00000446987 HAP1P54257 671 aaPredicted RBP17■□□□□ 0.31
DDX56-206ENST00000446987 NFKBIBQ15653 356 aa17■□□□□ 0.31
DDX56-206ENST00000446987 ATRNO75882 1429 aa17■□□□□ 0.31
DDX56-206ENST00000446987 ZC3H6P61129 1189 aaKnown RBP16.99■□□□□ 0.31
DDX56-206ENST00000446987 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
DDX56-206ENST00000446987 GLI3P10071 1580 aa16.99■□□□□ 0.31
DDX56-206ENST00000446987 ABCC6O95255 1503 aa16.99■□□□□ 0.31
DDX56-206ENST00000446987 PDE4AP27815 886 aa16.99■□□□□ 0.31
DDX56-206ENST00000446987 CHRNA2Q15822 529 aa16.99■□□□□ 0.31
DDX56-206ENST00000446987 NGLY1Q96IV0 654 aa16.99■□□□□ 0.31
DDX56-206ENST00000446987 GGNBP2Q9H3C7 697 aa16.99■□□□□ 0.31
DDX56-206ENST00000446987 PEAK1Q9H792 1746 aa16.98■□□□□ 0.31
DDX56-206ENST00000446987 PER1O15534 1290 aaPredicted RBP16.97■□□□□ 0.31
DDX56-206ENST00000446987 ARHGEF25Q86VW2 580 aa16.97■□□□□ 0.31
DDX56-206ENST00000446987 PRDM11Q9NQV5 511 aa16.97■□□□□ 0.31
DDX56-206ENST00000446987 COL5A2P05997 1499 aaPredicted RBP16.96■□□□□ 0.31
DDX56-206ENST00000446987 AATKQ6ZMQ8 1374 aa16.96■□□□□ 0.3
DDX56-206ENST00000446987 SOX12O15370 315 aa16.95■□□□□ 0.3
DDX56-206ENST00000446987 FBLN1P23142 703 aa16.95■□□□□ 0.3
DDX56-206ENST00000446987 USP21Q9UK80 565 aa16.95■□□□□ 0.3
DDX56-206ENST00000446987 CGNL1Q0VF96 1302 aa16.95■□□□□ 0.3
DDX56-206ENST00000446987 KCNH5Q8NCM2 988 aa16.95■□□□□ 0.3
DDX56-206ENST00000446987 PRKRIP1Q9H875 184 aaPredicted RBP16.95■□□□□ 0.3
DDX56-206ENST00000446987 HSP90AA2PQ14568 343 aaPredicted RBP16.94■□□□□ 0.3
DDX56-206ENST00000446987 AMER1Q5JTC6 1135 aaPredicted RBP16.94■□□□□ 0.3
DDX56-206ENST00000446987 ZNF772Q68DY9 489 aaPredicted RBP16.94■□□□□ 0.3
DDX56-206ENST00000446987 COG3Q96JB2 828 aa16.94■□□□□ 0.3
DDX56-206ENST00000446987 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
DDX56-206ENST00000446987 ILDR2Q71H61 639 aa16.93■□□□□ 0.3
DDX56-206ENST00000446987 UNC5CLQ8IV45 518 aa16.93■□□□□ 0.3
DDX56-206ENST00000446987 MAP2P11137 1827 aaKnown RBP16.93■□□□□ 0.3
DDX56-206ENST00000446987 AXIN2Q9Y2T1 843 aa16.93■□□□□ 0.3
DDX56-206ENST00000446987 NSD2O96028 1365 aa16.92■□□□□ 0.3
DDX56-206ENST00000446987 WNK3Q9BYP7 1800 aa16.91■□□□□ 0.3
DDX56-206ENST00000446987 MAP3K19Q56UN5 1328 aa16.91■□□□□ 0.3
DDX56-206ENST00000446987 QTRT2Q9H974 415 aaKnown RBP16.9■□□□□ 0.3
DDX56-206ENST00000446987 MRS2Q9HD23 443 aa16.9■□□□□ 0.3
DDX56-206ENST00000446987 RGS12O14924 1447 aa16.9■□□□□ 0.3
DDX56-206ENST00000446987 THSD7AQ9UPZ6 1657 aa16.89■□□□□ 0.3
DDX56-206ENST00000446987 VPS72Q15906 364 aa16.89■□□□□ 0.29
DDX56-206ENST00000446987 TRPC5Q9UL62 973 aaPredicted RBP16.89■□□□□ 0.29
DDX56-206ENST00000446987 RGPD2P0DJD1 1756 aa16.89■□□□□ 0.29
DDX56-206ENST00000446987 CDK12Q9NYV4 1490 aaPredicted RBP16.89■□□□□ 0.29
DDX56-206ENST00000446987 NPC1L1Q9UHC9 1359 aa16.89■□□□□ 0.29
DDX56-206ENST00000446987 HSP90AA1P07900 732 aaKnown RBP16.88■□□□□ 0.29
DDX56-206ENST00000446987 NPM2Q86SE8 214 aaKnown RBP16.88■□□□□ 0.29
DDX56-206ENST00000446987 ZBTB7CA1YPR0 619 aa16.88■□□□□ 0.29
DDX56-206ENST00000446987 RRS1Q15050 365 aaKnown RBP16.88■□□□□ 0.29
DDX56-206ENST00000446987 L1TD1Q5T7N2 865 aaKnown RBP16.88■□□□□ 0.29
DDX56-206ENST00000446987 FAM208AQ9UK61 1670 aaKnown RBP16.87■□□□□ 0.29
DDX56-206ENST00000446987 KNSTRNQ9Y448 316 aa16.87■□□□□ 0.29
DDX56-206ENST00000446987 BRWD3Q6RI45 1802 aa16.87■□□□□ 0.29
DDX56-206ENST00000446987 RTL1A6NKG5 1358 aa16.87■□□□□ 0.29
DDX56-206ENST00000446987 BLMP54132 1417 aaPredicted RBP16.87■□□□□ 0.29
DDX56-206ENST00000446987 SPATA31A5Q5VU36 1347 aa16.86■□□□□ 0.29
DDX56-206ENST00000446987 SPATA31A7Q8IWB4 1347 aa16.86■□□□□ 0.29
DDX56-206ENST00000446987 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
DDX56-206ENST00000446987 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
DDX56-206ENST00000446987 GJD4Q96KN9 370 aaPredicted RBP16.86■□□□□ 0.29
DDX56-206ENST00000446987 FAM9BQ8IZU0 186 aa16.85■□□□□ 0.29
DDX56-206ENST00000446987 STRN4Q9NRL3 753 aa16.85■□□□□ 0.29
DDX56-206ENST00000446987 EMILIN1Q9Y6C2 1016 aa16.85■□□□□ 0.29
DDX56-206ENST00000446987 ERBB3P21860 1342 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms