RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 IP6K1Q92551 441 aa13.64□□□□□ -0.23
LIN54-203ENST00000446851 ACSBG1Q96GR2 724 aa13.64□□□□□ -0.23
LIN54-203ENST00000446851 RGPD8O14715 1765 aaPredicted RBP13.64□□□□□ -0.23
LIN54-203ENST00000446851 EXOC5O00471 708 aa13.64□□□□□ -0.23
LIN54-203ENST00000446851 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
LIN54-203ENST00000446851 SETD1AO15047 1707 aaKnown RBP13.63□□□□□ -0.23
LIN54-203ENST00000446851 DDB1Q16531 1140 aa13.63□□□□□ -0.23
LIN54-203ENST00000446851 NBPF6Q5VWK0 638 aa13.63□□□□□ -0.23
LIN54-203ENST00000446851 NBPF4Q96M43 638 aa13.63□□□□□ -0.23
LIN54-203ENST00000446851 CCDC184Q52MB2 194 aa13.63□□□□□ -0.23
LIN54-203ENST00000446851 MYBBP1AQ9BQG0 1328 aaKnown RBP13.62□□□□□ -0.23
LIN54-203ENST00000446851 EIF4A2Q14240 407 aaKnown RBP13.62□□□□□ -0.23
LIN54-203ENST00000446851 C1orf141Q5JVX7 400 aa13.62□□□□□ -0.23
LIN54-203ENST00000446851 POTEAQ6S8J7 498 aa13.62□□□□□ -0.23
LIN54-203ENST00000446851 CPSF1Q10570 1443 aaKnown RBP13.62□□□□□ -0.23
LIN54-203ENST00000446851 PRKAR2BP31323 418 aa13.62□□□□□ -0.23
LIN54-203ENST00000446851 TCP11L2Q8N4U5 519 aa13.62□□□□□ -0.23
LIN54-203ENST00000446851 SF3B2Q13435 895 aaKnown RBP13.61□□□□□ -0.23
LIN54-203ENST00000446851 SEPT12Q8IYM1 358 aa13.61□□□□□ -0.23
LIN54-203ENST00000446851 RTF1Q92541 710 aaKnown RBP13.61□□□□□ -0.23
LIN54-203ENST00000446851 GJD4Q96KN9 370 aaPredicted RBP13.61□□□□□ -0.23
LIN54-203ENST00000446851 EYA1Q99502 592 aa13.61□□□□□ -0.23
LIN54-203ENST00000446851 ZNF330Q9Y3S2 320 aaPredicted RBP13.61□□□□□ -0.23
LIN54-203ENST00000446851 PHLPP1O60346 1717 aa13.6□□□□□ -0.23
LIN54-203ENST00000446851 ZNF530Q6P9A1 599 aaPredicted RBP13.6□□□□□ -0.23
LIN54-203ENST00000446851 HNRNPUQ00839 825 aaKnown RBP eCLIP13.59□□□□□ -0.23
LIN54-203ENST00000446851 FLT4P35916 1363 aa13.59□□□□□ -0.23
LIN54-203ENST00000446851 IL2RBP14784 551 aa13.59□□□□□ -0.23
LIN54-203ENST00000446851 RBM6P78332 1123 aaKnown RBP13.59□□□□□ -0.23
LIN54-203ENST00000446851 MPRIPQ6WCQ1 1025 aa13.59□□□□□ -0.23
LIN54-203ENST00000446851 ERBB3P21860 1342 aa13.57□□□□□ -0.24
LIN54-203ENST00000446851 ADAMTS8Q9UP79 889 aa13.57□□□□□ -0.24
LIN54-203ENST00000446851 PXDNQ92626 1479 aa13.57□□□□□ -0.24
LIN54-203ENST00000446851 FMN2Q9NZ56 1722 aa13.57□□□□□ -0.24
LIN54-203ENST00000446851 KNDC1Q76NI1 1749 aa13.56□□□□□ -0.24
LIN54-203ENST00000446851 IQSEC2Q5JU85 1478 aa13.56□□□□□ -0.24
LIN54-203ENST00000446851 WDR17Q8IZU2 1322 aa13.56□□□□□ -0.24
LIN54-203ENST00000446851 CD163L1Q9NR16 1453 aa13.56□□□□□ -0.24
LIN54-203ENST00000446851 PLEKHO1Q53GL0 409 aaPredicted RBP13.55□□□□□ -0.24
LIN54-203ENST00000446851 ZCRB1Q8TBF4 217 aaKnown RBP13.55□□□□□ -0.24
LIN54-203ENST00000446851 TEFQ10587 303 aa13.55□□□□□ -0.24
LIN54-203ENST00000446851 DCTN1Q14203 1278 aa13.55□□□□□ -0.24
LIN54-203ENST00000446851 APAF1O14727 1248 aa13.54□□□□□ -0.24
LIN54-203ENST00000446851 MSH5O43196 834 aa13.54□□□□□ -0.24
LIN54-203ENST00000446851 NPM2Q86SE8 214 aaKnown RBP13.54□□□□□ -0.24
LIN54-203ENST00000446851 SPG7Q9UQ90 795 aa13.54□□□□□ -0.24
LIN54-203ENST00000446851 XIRP1Q702N8 1843 aaKnown RBP13.54□□□□□ -0.24
LIN54-203ENST00000446851 NSD2O96028 1365 aa13.54□□□□□ -0.24
LIN54-203ENST00000446851 KRT27Q7Z3Y8 459 aa13.54□□□□□ -0.24
LIN54-203ENST00000446851 TRIM37O94972 964 aa13.54□□□□□ -0.24
LIN54-203ENST00000446851 USP19O94966 1318 aa13.53□□□□□ -0.24
LIN54-203ENST00000446851 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
LIN54-203ENST00000446851 THUMPD2Q9BTF0 503 aaKnown RBP13.53□□□□□ -0.24
LIN54-203ENST00000446851 PTCD1O75127 700 aaKnown RBP13.53□□□□□ -0.24
LIN54-203ENST00000446851 USP32Q8NFA0 1604 aa13.52□□□□□ -0.24
LIN54-203ENST00000446851 BRD4O60885 1362 aaPredicted RBP13.52□□□□□ -0.25
LIN54-203ENST00000446851 RIPK4P57078 832 aa13.52□□□□□ -0.25
LIN54-203ENST00000446851 VPS72Q15906 364 aa13.52□□□□□ -0.25
LIN54-203ENST00000446851 FNBP4Q8N3X1 1017 aaPredicted RBP13.52□□□□□ -0.25
LIN54-203ENST00000446851 CARD10Q9BWT7 1032 aa13.52□□□□□ -0.25
LIN54-203ENST00000446851 PNNQ9H307 717 aaKnown RBP13.52□□□□□ -0.25
LIN54-203ENST00000446851 ELL2O00472 640 aaPredicted RBP13.51□□□□□ -0.25
LIN54-203ENST00000446851 AATKQ6ZMQ8 1374 aa13.51□□□□□ -0.25
LIN54-203ENST00000446851 ADGRB2O60241 1585 aa13.51□□□□□ -0.25
LIN54-203ENST00000446851 MCM10Q7L590 875 aa13.51□□□□□ -0.25
LIN54-203ENST00000446851 MIS18AQ9NYP9 233 aa13.51□□□□□ -0.25
LIN54-203ENST00000446851 CABP4P57796 275 aa13.5□□□□□ -0.25
LIN54-203ENST00000446851 KCNQ4P56696 695 aa13.49□□□□□ -0.25
LIN54-203ENST00000446851 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
LIN54-203ENST00000446851 PHACTR3Q96KR7 559 aa13.49□□□□□ -0.25
LIN54-203ENST00000446851 IL13P35225 146 aa13.49□□□□□ -0.25
LIN54-203ENST00000446851 PRIM1P49642 420 aaKnown RBP13.49□□□□□ -0.25
LIN54-203ENST00000446851 SPATA31A1Q5TZJ5 1347 aa13.49□□□□□ -0.25
LIN54-203ENST00000446851 USP31Q70CQ4 1352 aa13.49□□□□□ -0.25
LIN54-203ENST00000446851 LRP6O75581 1613 aa13.49□□□□□ -0.25
LIN54-203ENST00000446851 RGS17Q9UGC6 210 aaPredicted RBP13.49□□□□□ -0.25
LIN54-203ENST00000446851 APBA3O96018 575 aa13.48□□□□□ -0.25
LIN54-203ENST00000446851 NGEFQ8N5V2 710 aa13.48□□□□□ -0.25
LIN54-203ENST00000446851 OVOS2A0A0J9YW53 1432 aa13.48□□□□□ -0.25
LIN54-203ENST00000446851 OVOS2Q6IE36 1432 aa13.48□□□□□ -0.25
LIN54-203ENST00000446851 INSRP06213 1382 aa13.48□□□□□ -0.25
LIN54-203ENST00000446851 SPATA31A5Q5VU36 1347 aa13.48□□□□□ -0.25
LIN54-203ENST00000446851 SPATA31A7Q8IWB4 1347 aa13.48□□□□□ -0.25
LIN54-203ENST00000446851 ITSN1Q15811 1721 aa13.48□□□□□ -0.25
LIN54-203ENST00000446851 KIF1AQ12756 1690 aa13.47□□□□□ -0.25
LIN54-203ENST00000446851 IFNL2Q8IZJ0 200 aa13.47□□□□□ -0.25
LIN54-203ENST00000446851 TTC5Q8N0Z6 440 aa13.47□□□□□ -0.25
LIN54-203ENST00000446851 MTHFSDQ2M296 383 aaKnown RBP13.47□□□□□ -0.25
LIN54-203ENST00000446851 TMOD3Q9NYL9 352 aa13.47□□□□□ -0.25
LIN54-203ENST00000446851 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
LIN54-203ENST00000446851 BCL11BQ9C0K0 894 aaPredicted RBP13.46□□□□□ -0.25
LIN54-203ENST00000446851 KCNQ2O43526 872 aa13.46□□□□□ -0.26
LIN54-203ENST00000446851 GAS2L2Q8NHY3 880 aa13.46□□□□□ -0.26
LIN54-203ENST00000446851 SLC39A6Q13433 755 aa13.45□□□□□ -0.26
LIN54-203ENST00000446851 FCHSD2O94868 740 aa13.45□□□□□ -0.26
LIN54-203ENST00000446851 TCERG1O14776 1098 aaKnown RBP13.45□□□□□ -0.26
LIN54-203ENST00000446851 ILDR2Q71H61 639 aa13.44□□□□□ -0.26
LIN54-203ENST00000446851 NFATC2IPQ8NCF5 419 aa13.44□□□□□ -0.26
LIN54-203ENST00000446851 CRB1P82279 1406 aa13.44□□□□□ -0.26
LIN54-203ENST00000446851 DEFB132Q7Z7B7 95 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms