RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 SPATA31A1Q5TZJ5 1347 aa10.84□□□□□ -0.67
HDAC9-216ENST00000446646 ADGRF5Q8IZF2 1346 aa10.84□□□□□ -0.67
HDAC9-216ENST00000446646 FMN2Q9NZ56 1722 aa10.84□□□□□ -0.67
HDAC9-216ENST00000446646 VGFO15240 615 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-216ENST00000446646 PTF1AQ7RTS3 328 aa10.84□□□□□ -0.67
HDAC9-216ENST00000446646 PMFBP1Q8TBY8 1022 aa10.84□□□□□ -0.67
HDAC9-216ENST00000446646 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
HDAC9-216ENST00000446646 FHDC1Q9C0D6 1143 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-216ENST00000446646 MYOM1P52179 1685 aa10.84□□□□□ -0.67
HDAC9-216ENST00000446646 TECPR2O15040 1411 aa10.84□□□□□ -0.67
HDAC9-216ENST00000446646 ARHGEF10O15013 1369 aa10.83□□□□□ -0.68
HDAC9-216ENST00000446646 RGPD8O14715 1765 aaPredicted RBP10.82□□□□□ -0.68
HDAC9-216ENST00000446646 KIF1AQ12756 1690 aa10.82□□□□□ -0.68
HDAC9-216ENST00000446646 NRXN1Q9ULB1 1477 aa10.82□□□□□ -0.68
HDAC9-216ENST00000446646 PCNTO95613 3336 aa10.82□□□□□ -0.68
HDAC9-216ENST00000446646 PSME1Q06323 249 aa10.82□□□□□ -0.68
HDAC9-216ENST00000446646 CHRNA2Q15822 529 aa10.82□□□□□ -0.68
HDAC9-216ENST00000446646 SYT17Q9BSW7 474 aa10.82□□□□□ -0.68
HDAC9-216ENST00000446646 USP35Q9P2H5 1018 aa10.82□□□□□ -0.68
HDAC9-216ENST00000446646 TRIM35Q9UPQ4 493 aa10.82□□□□□ -0.68
HDAC9-216ENST00000446646 ROCK1Q13464 1354 aa10.81□□□□□ -0.68
HDAC9-216ENST00000446646 CASZ1Q86V15 1759 aa10.81□□□□□ -0.68
HDAC9-216ENST00000446646 CHRM1P11229 460 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-216ENST00000446646 ITGAEP38570 1179 aa10.81□□□□□ -0.68
HDAC9-216ENST00000446646 ZNF467Q7Z7K2 595 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-216ENST00000446646 STRN4Q9NRL3 753 aa10.81□□□□□ -0.68
HDAC9-216ENST00000446646 COL14A1Q05707 1796 aaKnown RBP10.8□□□□□ -0.68
HDAC9-216ENST00000446646 GIGYF1O75420 1035 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-216ENST00000446646 RRBP1Q9P2E9 1410 aaKnown RBP10.8□□□□□ -0.68
HDAC9-216ENST00000446646 ABCC11Q96J66 1382 aa10.79□□□□□ -0.68
HDAC9-216ENST00000446646 PRDM11Q9NQV5 511 aa10.79□□□□□ -0.68
HDAC9-216ENST00000446646 KIAA0232Q92628 1395 aa10.78□□□□□ -0.68
HDAC9-216ENST00000446646 POTEB2H3BUK9 544 aa10.78□□□□□ -0.68
HDAC9-216ENST00000446646 SAFB2Q14151 953 aaKnown RBP eCLIP10.78□□□□□ -0.68
HDAC9-216ENST00000446646 TRPM3Q9HCF6 1732 aaPredicted RBP10.78□□□□□ -0.68
HDAC9-216ENST00000446646 PDE3BQ13370 1112 aa10.77□□□□□ -0.69
HDAC9-216ENST00000446646 PPLO60437 1756 aa10.76□□□□□ -0.69
HDAC9-216ENST00000446646 SEC24BO95487 1268 aa10.76□□□□□ -0.69
HDAC9-216ENST00000446646 LARP1Q6PKG0 1096 aaKnown RBP10.76□□□□□ -0.69
HDAC9-216ENST00000446646 KIF1BO60333 1816 aa10.76□□□□□ -0.69
HDAC9-216ENST00000446646 RPGRIP1LQ68CZ1 1315 aa10.76□□□□□ -0.69
HDAC9-216ENST00000446646 ALS2Q96Q42 1657 aa10.76□□□□□ -0.69
HDAC9-216ENST00000446646 ZC3H6P61129 1189 aaKnown RBP10.75□□□□□ -0.69
HDAC9-216ENST00000446646 CHD4Q14839 1912 aa10.75□□□□□ -0.69
HDAC9-216ENST00000446646 PRR36Q9H6K5 1346 aa10.75□□□□□ -0.69
HDAC9-216ENST00000446646 SHANK3Q9BYB0 1731 aa10.75□□□□□ -0.69
HDAC9-216ENST00000446646 IFT172Q9UG01 1749 aa10.75□□□□□ -0.69
HDAC9-216ENST00000446646 CRYBG1Q9Y4K1 1723 aa10.75□□□□□ -0.69
HDAC9-216ENST00000446646 YTHDC2Q9H6S0 1430 aaKnown RBP10.75□□□□□ -0.69
HDAC9-216ENST00000446646 BARGINQ6ZT62 677 aa10.74□□□□□ -0.69
HDAC9-216ENST00000446646 ACIN1Q9UKV3 1341 aaKnown RBP10.74□□□□□ -0.69
HDAC9-216ENST00000446646 IER5LQ5T953 404 aa10.73□□□□□ -0.69
HDAC9-216ENST00000446646 NUTM2GQ5VZR2 741 aa10.73□□□□□ -0.69
HDAC9-216ENST00000446646 BCL11BQ9C0K0 894 aaPredicted RBP10.73□□□□□ -0.69
HDAC9-216ENST00000446646 SSH2Q76I76 1423 aa10.73□□□□□ -0.69
HDAC9-216ENST00000446646 RGL3Q3MIN7 710 aa10.72□□□□□ -0.69
HDAC9-216ENST00000446646 PRAM1Q96QH2 718 aa10.72□□□□□ -0.69
HDAC9-216ENST00000446646 HIRIP3Q9BW71 556 aaPredicted RBP10.72□□□□□ -0.69
HDAC9-216ENST00000446646 KNDC1Q76NI1 1749 aa10.72□□□□□ -0.69
HDAC9-216ENST00000446646 POTEFA5A3E0 1075 aa10.71□□□□□ -0.69
HDAC9-216ENST00000446646 PLSCR1O15162 318 aa10.71□□□□□ -0.69
HDAC9-216ENST00000446646 PSEN1P49768 467 aa10.71□□□□□ -0.69
HDAC9-216ENST00000446646 TCP11L2Q8N4U5 519 aa10.71□□□□□ -0.69
HDAC9-216ENST00000446646 COLQQ9Y215 455 aaPredicted RBP10.71□□□□□ -0.69
HDAC9-216ENST00000446646 PEAK1Q9H792 1746 aa10.7□□□□□ -0.7
HDAC9-216ENST00000446646 DLC1Q96QB1 1528 aa10.7□□□□□ -0.7
HDAC9-216ENST00000446646 PIK3C2GO75747 1445 aa10.7□□□□□ -0.7
HDAC9-216ENST00000446646 GPR162Q16538 588 aa10.7□□□□□ -0.7
HDAC9-216ENST00000446646 ARXQ96QS3 562 aa10.7□□□□□ -0.7
HDAC9-216ENST00000446646 PDAP1Q13442 181 aaKnown RBP10.69□□□□□ -0.7
HDAC9-216ENST00000446646 OTUD5Q96G74 571 aa10.69□□□□□ -0.7
HDAC9-216ENST00000446646 MTFR1LQ9H019 292 aa10.69□□□□□ -0.7
HDAC9-216ENST00000446646 ANKARQ7Z5J8 1434 aa10.68□□□□□ -0.7
HDAC9-216ENST00000446646 GPRASP1Q5JY77 1395 aa10.68□□□□□ -0.7
HDAC9-216ENST00000446646 EVA1CP58658 441 aa10.68□□□□□ -0.7
HDAC9-216ENST00000446646 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
HDAC9-216ENST00000446646 SLC15A2Q16348 729 aa10.68□□□□□ -0.7
HDAC9-216ENST00000446646 CFAP70Q5T0N1 1121 aa10.68□□□□□ -0.7
HDAC9-216ENST00000446646 SIRT1Q96EB6 747 aa10.68□□□□□ -0.7
HDAC9-216ENST00000446646 SPATA31E1Q6ZUB1 1445 aa10.67□□□□□ -0.7
HDAC9-216ENST00000446646 PLCG2P16885 1265 aa10.67□□□□□ -0.7
HDAC9-216ENST00000446646 TXNRD1Q16881 649 aa10.67□□□□□ -0.7
HDAC9-216ENST00000446646 NLGN2Q8NFZ4 835 aa10.67□□□□□ -0.7
HDAC9-216ENST00000446646 MAP3K5Q99683 1374 aa10.66□□□□□ -0.7
HDAC9-216ENST00000446646 POTEJP0CG39 1038 aa10.66□□□□□ -0.7
HDAC9-216ENST00000446646 YBX3P16989 372 aaKnown RBP eCLIP10.66□□□□□ -0.7
HDAC9-216ENST00000446646 HSPA6P17066 643 aa10.66□□□□□ -0.7
HDAC9-216ENST00000446646 MARCH10Q8NA82 808 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-216ENST00000446646 STK32BQ9NY57 414 aa10.66□□□□□ -0.7
HDAC9-216ENST00000446646 OVOS2A0A0G2JMS6 1433 aa10.66□□□□□ -0.7
HDAC9-216ENST00000446646 OVOS2A0A0J9YW53 1432 aa10.66□□□□□ -0.7
HDAC9-216ENST00000446646 OVOS2Q6IE36 1432 aa10.66□□□□□ -0.7
HDAC9-216ENST00000446646 PHRF1Q9P1Y6 1649 aaKnown RBP10.66□□□□□ -0.7
HDAC9-216ENST00000446646 RGPD3A6NKT7 1758 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-216ENST00000446646 RGPD4Q7Z3J3 1758 aa10.65□□□□□ -0.7
HDAC9-216ENST00000446646 MINK1Q8N4C8 1332 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-216ENST00000446646 NGDNQ8NEJ9 315 aaKnown RBP10.65□□□□□ -0.7
HDAC9-216ENST00000446646 C14orf93Q9H972 538 aaKnown RBP10.65□□□□□ -0.7
HDAC9-216ENST00000446646 ATP10DQ9P241 1426 aa10.65□□□□□ -0.7
HDAC9-216ENST00000446646 SBF2Q86WG5 1849 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms