RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 CDCA7Q9BWT1 371 aaPredicted RBP10.59□□□□□ -0.71
BRAFP1-201ENST00000445336 KIF13BQ9NQT8 1826 aa10.59□□□□□ -0.71
BRAFP1-201ENST00000445336 COL18A1P39060 1754 aa10.58□□□□□ -0.72
BRAFP1-201ENST00000445336 ANKARQ7Z5J8 1434 aa10.57□□□□□ -0.72
BRAFP1-201ENST00000445336 HABP4Q5JVS0 413 aaKnown RBP10.57□□□□□ -0.72
BRAFP1-201ENST00000445336 MYOM3Q5VTT5 1437 aa10.57□□□□□ -0.72
BRAFP1-201ENST00000445336 KIAA0232Q92628 1395 aa10.56□□□□□ -0.72
BRAFP1-201ENST00000445336 ARFGEF1Q9Y6D6 1849 aa10.56□□□□□ -0.72
BRAFP1-201ENST00000445336 AKT1S1Q96B36 256 aa10.56□□□□□ -0.72
BRAFP1-201ENST00000445336 HTRA3P83110 453 aa10.55□□□□□ -0.72
BRAFP1-201ENST00000445336 NMRK2Q9NPI5 230 aa10.55□□□□□ -0.72
BRAFP1-201ENST00000445336 MAP2K1Q02750 393 aaPredicted RBP10.54□□□□□ -0.72
BRAFP1-201ENST00000445336 SLC27A3Q5K4L6 730 aa10.54□□□□□ -0.72
BRAFP1-201ENST00000445336 LBX1P52954 281 aa10.53□□□□□ -0.72
BRAFP1-201ENST00000445336 CPDO75976 1380 aa10.52□□□□□ -0.73
BRAFP1-201ENST00000445336 E9PCH4 1651 aa10.52□□□□□ -0.73
BRAFP1-201ENST00000445336 SIRT1Q96EB6 747 aa10.52□□□□□ -0.73
BRAFP1-201ENST00000445336 NBPF15Q8N660 670 aa10.51□□□□□ -0.73
BRAFP1-201ENST00000445336 KIAA1551Q9HCM1 1747 aa10.51□□□□□ -0.73
BRAFP1-201ENST00000445336 SPATA31E1Q6ZUB1 1445 aa10.51□□□□□ -0.73
BRAFP1-201ENST00000445336 USP54Q70EL1 1684 aa10.49□□□□□ -0.73
BRAFP1-201ENST00000445336 PNPLA7Q6ZV29 1317 aa10.49□□□□□ -0.73
BRAFP1-201ENST00000445336 CA12O43570 354 aa10.49□□□□□ -0.73
BRAFP1-201ENST00000445336 PHF8Q9UPP1 1060 aa10.48□□□□□ -0.73
BRAFP1-201ENST00000445336 MEGF6O75095 1541 aa10.48□□□□□ -0.73
BRAFP1-201ENST00000445336 LY75O60449 1722 aa10.48□□□□□ -0.73
BRAFP1-201ENST00000445336 BTAF1O14981 1849 aa10.48□□□□□ -0.73
BRAFP1-201ENST00000445336 ABCC6O95255 1503 aa10.48□□□□□ -0.73
BRAFP1-201ENST00000445336 CRB1P82279 1406 aa10.47□□□□□ -0.73
BRAFP1-201ENST00000445336 PRDM11Q9NQV5 511 aa10.47□□□□□ -0.73
BRAFP1-201ENST00000445336 EIF3AQ14152 1382 aaKnown RBP10.46□□□□□ -0.73
BRAFP1-201ENST00000445336 BRCA1P38398 1863 aaKnown RBP10.46□□□□□ -0.73
BRAFP1-201ENST00000445336 FLAD1Q8NFF5 587 aa10.46□□□□□ -0.74
BRAFP1-201ENST00000445336 PPLO60437 1756 aa10.46□□□□□ -0.74
BRAFP1-201ENST00000445336 IGSF1Q8N6C5 1336 aa10.45□□□□□ -0.74
BRAFP1-201ENST00000445336 FXR1P51114 621 aaKnown RBP eCLIP10.45□□□□□ -0.74
BRAFP1-201ENST00000445336 XPCQ01831 940 aaPredicted RBP10.45□□□□□ -0.74
BRAFP1-201ENST00000445336 KLHL34Q8N239 644 aa10.45□□□□□ -0.74
BRAFP1-201ENST00000445336 CABLES1Q8TDN4 633 aa10.45□□□□□ -0.74
BRAFP1-201ENST00000445336 KCPQ6ZWJ8 1503 aa10.45□□□□□ -0.74
BRAFP1-201ENST00000445336 RANGAP1P46060 587 aaPredicted RBP10.44□□□□□ -0.74
BRAFP1-201ENST00000445336 ZNF827Q17R98 1081 aa10.44□□□□□ -0.74
BRAFP1-201ENST00000445336 SLC17A8Q8NDX2 589 aa10.44□□□□□ -0.74
BRAFP1-201ENST00000445336 PDE4DIPQ5VU43 2346 aa10.44□□□□□ -0.74
BRAFP1-201ENST00000445336 LTBP1Q14766 1721 aa10.43□□□□□ -0.74
BRAFP1-201ENST00000445336 RGPD8O14715 1765 aaPredicted RBP10.43□□□□□ -0.74
BRAFP1-201ENST00000445336 MCOLN1Q9GZU1 580 aa10.42□□□□□ -0.74
BRAFP1-201ENST00000445336 KDM6AO15550 1401 aaPredicted RBP10.42□□□□□ -0.74
BRAFP1-201ENST00000445336 ANKRD30AQ9BXX3 1397 aa10.42□□□□□ -0.74
BRAFP1-201ENST00000445336 ABCC11Q96J66 1382 aa10.42□□□□□ -0.74
BRAFP1-201ENST00000445336 GPRASP1Q5JY77 1395 aa10.41□□□□□ -0.74
BRAFP1-201ENST00000445336 VEGFAP15692 232 aaPredicted RBP10.41□□□□□ -0.74
BRAFP1-201ENST00000445336 DDB1Q16531 1140 aa10.41□□□□□ -0.74
BRAFP1-201ENST00000445336 NSD3Q9BZ95 1437 aa10.41□□□□□ -0.74
BRAFP1-201ENST00000445336 COL5A2P05997 1499 aaPredicted RBP10.41□□□□□ -0.74
BRAFP1-201ENST00000445336 RPGRIP1LQ68CZ1 1315 aa10.4□□□□□ -0.74
BRAFP1-201ENST00000445336 KIF1BO60333 1816 aa10.4□□□□□ -0.74
BRAFP1-201ENST00000445336 SBF1O95248 1867 aa10.4□□□□□ -0.74
BRAFP1-201ENST00000445336 USP6P35125 1406 aa10.4□□□□□ -0.74
BRAFP1-201ENST00000445336 RASSF10A6NK89 507 aa10.4□□□□□ -0.75
BRAFP1-201ENST00000445336 YTHDC2Q9H6S0 1430 aaKnown RBP10.39□□□□□ -0.75
BRAFP1-201ENST00000445336 TGFB2P61812 414 aa10.39□□□□□ -0.75
BRAFP1-201ENST00000445336 ITSN1Q15811 1721 aa10.39□□□□□ -0.75
BRAFP1-201ENST00000445336 EVA1CP58658 441 aa10.38□□□□□ -0.75
BRAFP1-201ENST00000445336 IGSF5Q9NSI5 407 aa10.38□□□□□ -0.75
BRAFP1-201ENST00000445336 MPNDQ8N594 471 aa10.38□□□□□ -0.75
BRAFP1-201ENST00000445336 RRAGCQ9HB90 399 aa10.38□□□□□ -0.75
BRAFP1-201ENST00000445336 SLIT3O75094 1523 aa10.37□□□□□ -0.75
BRAFP1-201ENST00000445336 PASKQ96RG2 1323 aa10.36□□□□□ -0.75
BRAFP1-201ENST00000445336 VEGFBP49765 207 aa10.36□□□□□ -0.75
BRAFP1-201ENST00000445336 VGFO15240 615 aaPredicted RBP10.35□□□□□ -0.75
BRAFP1-201ENST00000445336 CHADLQ6NUI6 762 aa10.35□□□□□ -0.75
BRAFP1-201ENST00000445336 MARCH10Q8NA82 808 aaPredicted RBP10.34□□□□□ -0.75
BRAFP1-201ENST00000445336 C9orf131Q5VYM1 1079 aa10.34□□□□□ -0.75
BRAFP1-201ENST00000445336 MKRN1Q9UHC7 482 aaKnown RBP10.34□□□□□ -0.75
BRAFP1-201ENST00000445336 ARIH1Q9Y4X5 557 aaPredicted RBP10.33□□□□□ -0.76
BRAFP1-201ENST00000445336 RBBP6Q7Z6E9 1792 aaKnown RBP10.32□□□□□ -0.76
BRAFP1-201ENST00000445336 DAPK1P53355 1430 aa10.32□□□□□ -0.76
BRAFP1-201ENST00000445336 TIAM2Q8IVF5 1701 aa10.32□□□□□ -0.76
BRAFP1-201ENST00000445336 BEGAINQ9BUH8 593 aa10.32□□□□□ -0.76
BRAFP1-201ENST00000445336 STRN4Q9NRL3 753 aa10.32□□□□□ -0.76
BRAFP1-201ENST00000445336 PLA2G5P39877 138 aa10.32□□□□□ -0.76
BRAFP1-201ENST00000445336 LARP1Q6PKG0 1096 aaKnown RBP10.32□□□□□ -0.76
BRAFP1-201ENST00000445336 TMEM88BA6NKF7 163 aa10.31□□□□□ -0.76
BRAFP1-201ENST00000445336 PRDM6Q9NQX0 595 aa10.31□□□□□ -0.76
BRAFP1-201ENST00000445336 GLTPD2A6NH11 291 aa10.31□□□□□ -0.76
BRAFP1-201ENST00000445336 ECE1P42892 770 aa10.31□□□□□ -0.76
BRAFP1-201ENST00000445336 CCDC7Q96M83 1385 aa10.3□□□□□ -0.76
BRAFP1-201ENST00000445336 HOXD11P31277 338 aaPredicted RBP10.3□□□□□ -0.76
BRAFP1-201ENST00000445336 ACIN1Q9UKV3 1341 aaKnown RBP10.3□□□□□ -0.76
BRAFP1-201ENST00000445336 TFCP2L1Q9NZI6 479 aa10.3□□□□□ -0.76
BRAFP1-201ENST00000445336 SCN4AP35499 1836 aa10.3□□□□□ -0.76
BRAFP1-201ENST00000445336 C5P01031 1676 aa10.3□□□□□ -0.76
BRAFP1-201ENST00000445336 MAP2K2P36507 400 aa10.29□□□□□ -0.76
BRAFP1-201ENST00000445336 WDR33Q9C0J8 1336 aaKnown RBP10.29□□□□□ -0.76
BRAFP1-201ENST00000445336 SYNGAP1Q96PV0 1343 aa10.29□□□□□ -0.76
BRAFP1-201ENST00000445336 PTF1AQ7RTS3 328 aa10.28□□□□□ -0.76
BRAFP1-201ENST00000445336 LRRC4BQ9NT99 713 aa10.28□□□□□ -0.76
BRAFP1-201ENST00000445336 ADAMTSL1Q8N6G6 1762 aa10.28□□□□□ -0.76
BRAFP1-201ENST00000445336 DGKZQ13574 1117 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms