RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 VSIG10Q8N0Z9 540 aa11.87□□□□□ -0.51
FXR1-203ENST00000445140 GGNBP2Q9H3C7 697 aa11.87□□□□□ -0.51
FXR1-203ENST00000445140 SLIT2O94813 1529 aa11.87□□□□□ -0.51
FXR1-203ENST00000445140 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.87□□□□□ -0.51
FXR1-203ENST00000445140 GCP02774 474 aa11.86□□□□□ -0.51
FXR1-203ENST00000445140 POLKQ9UBT6 870 aa11.85□□□□□ -0.51
FXR1-203ENST00000445140 LRP6O75581 1613 aa11.85□□□□□ -0.51
FXR1-203ENST00000445140 PKD1L3Q7Z443 1732 aa11.85□□□□□ -0.51
FXR1-203ENST00000445140 PARP4Q9UKK3 1724 aaKnown RBP11.85□□□□□ -0.51
FXR1-203ENST00000445140 IP6K1Q92551 441 aa11.84□□□□□ -0.51
FXR1-203ENST00000445140 MAP3K19Q56UN5 1328 aa11.84□□□□□ -0.51
FXR1-203ENST00000445140 COL5A2P05997 1499 aaPredicted RBP11.84□□□□□ -0.51
FXR1-203ENST00000445140 DDX17Q92841 729 aaKnown RBP11.84□□□□□ -0.51
FXR1-203ENST00000445140 CC2D1BQ5T0F9 858 aaKnown RBP11.83□□□□□ -0.51
FXR1-203ENST00000445140 KDRP35968 1356 aa11.83□□□□□ -0.52
FXR1-203ENST00000445140 PAK3O75914 559 aaPredicted RBP11.83□□□□□ -0.52
FXR1-203ENST00000445140 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
FXR1-203ENST00000445140 ADAMTS7Q9UKP4 1686 aa11.82□□□□□ -0.52
FXR1-203ENST00000445140 BCL11AQ9H165 835 aa11.82□□□□□ -0.52
FXR1-203ENST00000445140 HSPA1LP34931 641 aa11.82□□□□□ -0.52
FXR1-203ENST00000445140 PIP4K2BP78356 416 aa11.82□□□□□ -0.52
FXR1-203ENST00000445140 XPCQ01831 940 aaPredicted RBP11.82□□□□□ -0.52
FXR1-203ENST00000445140 CFAP53Q96M91 514 aa11.82□□□□□ -0.52
FXR1-203ENST00000445140 RGPD2P0DJD1 1756 aa11.82□□□□□ -0.52
FXR1-203ENST00000445140 HOXC9P31274 260 aa11.81□□□□□ -0.52
FXR1-203ENST00000445140 KIAA0232Q92628 1395 aa11.81□□□□□ -0.52
FXR1-203ENST00000445140 THSD7AQ9UPZ6 1657 aa11.8□□□□□ -0.52
FXR1-203ENST00000445140 IGSF1Q8N6C5 1336 aa11.8□□□□□ -0.52
FXR1-203ENST00000445140 MTHFSP49914 203 aa11.79□□□□□ -0.52
FXR1-203ENST00000445140 SHANK3Q9BYB0 1731 aa11.79□□□□□ -0.52
FXR1-203ENST00000445140 IL13P35225 146 aa11.79□□□□□ -0.52
FXR1-203ENST00000445140 FNBP4Q8N3X1 1017 aaPredicted RBP11.78□□□□□ -0.52
FXR1-203ENST00000445140 GTF3C3Q9Y5Q9 886 aa11.78□□□□□ -0.52
FXR1-203ENST00000445140 ERBB3P21860 1342 aa11.78□□□□□ -0.52
FXR1-203ENST00000445140 DISP2A7MBM2 1401 aa11.77□□□□□ -0.52
FXR1-203ENST00000445140 CRB1P82279 1406 aa11.77□□□□□ -0.53
FXR1-203ENST00000445140 LRRC37A3O60309 1634 aa11.77□□□□□ -0.53
FXR1-203ENST00000445140 NGEFQ8N5V2 710 aa11.77□□□□□ -0.53
FXR1-203ENST00000445140 PNISRQ8TF01 805 aaKnown RBP11.77□□□□□ -0.53
FXR1-203ENST00000445140 EMILIN1Q9Y6C2 1016 aa11.77□□□□□ -0.53
FXR1-203ENST00000445140 ATRNO75882 1429 aa11.77□□□□□ -0.53
FXR1-203ENST00000445140 WDR17Q8IZU2 1322 aa11.76□□□□□ -0.53
FXR1-203ENST00000445140 HOMEZQ8IX15 550 aa11.76□□□□□ -0.53
FXR1-203ENST00000445140 BCL9LQ86UU0 1499 aa11.76□□□□□ -0.53
FXR1-203ENST00000445140 MIER1Q8N108 512 aa11.76□□□□□ -0.53
FXR1-203ENST00000445140 DIAPH1O60610 1272 aaKnown RBP11.75□□□□□ -0.53
FXR1-203ENST00000445140 NUDCQ9Y266 331 aa11.75□□□□□ -0.53
FXR1-203ENST00000445140 OVOS2A0A0G2JMS6 1433 aa11.75□□□□□ -0.53
FXR1-203ENST00000445140 EIF4A2Q14240 407 aaKnown RBP11.74□□□□□ -0.53
FXR1-203ENST00000445140 PNNQ9H307 717 aaKnown RBP11.74□□□□□ -0.53
FXR1-203ENST00000445140 VIRMAQ69YN4 1812 aaKnown RBP11.74□□□□□ -0.53
FXR1-203ENST00000445140 AMPHP49418 695 aa11.74□□□□□ -0.53
FXR1-203ENST00000445140 RRS1Q15050 365 aaKnown RBP11.74□□□□□ -0.53
FXR1-203ENST00000445140 PRDM11Q9NQV5 511 aa11.74□□□□□ -0.53
FXR1-203ENST00000445140 THRAP3Q9Y2W1 955 aaKnown RBP11.74□□□□□ -0.53
FXR1-203ENST00000445140 CARD10Q9BWT7 1032 aa11.73□□□□□ -0.53
FXR1-203ENST00000445140 GLI3P10071 1580 aa11.73□□□□□ -0.53
FXR1-203ENST00000445140 DLG5Q8TDM6 1919 aa11.73□□□□□ -0.53
FXR1-203ENST00000445140 FAM83GA6ND36 823 aa11.73□□□□□ -0.53
FXR1-203ENST00000445140 FCHSD2O94868 740 aa11.73□□□□□ -0.53
FXR1-203ENST00000445140 NUTM2GQ5VZR2 741 aa11.73□□□□□ -0.53
FXR1-203ENST00000445140 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
FXR1-203ENST00000445140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.73□□□□□ -0.534e-8■■□□□ 12.1
FXR1-203ENST00000445140 SIPA1L3O60292 1781 aaPredicted RBP11.72□□□□□ -0.53
FXR1-203ENST00000445140 HSP90AB2PQ58FF8 381 aa11.72□□□□□ -0.53
FXR1-203ENST00000445140 LMOD2Q6P5Q4 547 aa11.72□□□□□ -0.53
FXR1-203ENST00000445140 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
FXR1-203ENST00000445140 ANKRD24Q8TF21 1146 aa11.72□□□□□ -0.53
FXR1-203ENST00000445140 CDCA7Q9BWT1 371 aaPredicted RBP11.72□□□□□ -0.53
FXR1-203ENST00000445140 MRS2Q9HD23 443 aa11.72□□□□□ -0.53
FXR1-203ENST00000445140 BCL9O00512 1426 aa11.71□□□□□ -0.53
FXR1-203ENST00000445140 VPS72Q15906 364 aa11.71□□□□□ -0.53
FXR1-203ENST00000445140 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.53
FXR1-203ENST00000445140 SCN11AQ9UI33 1791 aa11.71□□□□□ -0.54
FXR1-203ENST00000445140 BARGINQ6ZT62 677 aa11.71□□□□□ -0.54
FXR1-203ENST00000445140 MRC1P22897 1456 aa11.71□□□□□ -0.54
FXR1-203ENST00000445140 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
FXR1-203ENST00000445140 CICQ96RK0 1608 aaPredicted RBP11.7□□□□□ -0.54
FXR1-203ENST00000445140 UNC5CLQ8IV45 518 aa11.7□□□□□ -0.54
FXR1-203ENST00000445140 PLEKHF1Q96S99 279 aa11.7□□□□□ -0.54
FXR1-203ENST00000445140 SPATA31A5Q5VU36 1347 aa11.7□□□□□ -0.54
FXR1-203ENST00000445140 SPATA31A7Q8IWB4 1347 aa11.7□□□□□ -0.54
FXR1-203ENST00000445140 TNS2Q63HR2 1409 aa11.69□□□□□ -0.54
FXR1-203ENST00000445140 ZC3H6P61129 1189 aaKnown RBP11.69□□□□□ -0.54
FXR1-203ENST00000445140 EYA1Q99502 592 aa11.69□□□□□ -0.54
FXR1-203ENST00000445140 CCDC184Q52MB2 194 aa11.68□□□□□ -0.54
FXR1-203ENST00000445140 SPATA31A1Q5TZJ5 1347 aa11.68□□□□□ -0.54
FXR1-203ENST00000445140 PAPPAQ13219 1627 aa11.68□□□□□ -0.54
FXR1-203ENST00000445140 TNNT2P45379 298 aaPredicted RBP11.68□□□□□ -0.54
FXR1-203ENST00000445140 CCDC27Q2M243 656 aa11.68□□□□□ -0.54
FXR1-203ENST00000445140 MEGF6O75095 1541 aa11.68□□□□□ -0.54
FXR1-203ENST00000445140 ONECUT3O60422 494 aaPredicted RBP11.67□□□□□ -0.54
FXR1-203ENST00000445140 FBLN1P23142 703 aa11.67□□□□□ -0.54
FXR1-203ENST00000445140 WDR43Q15061 677 aaKnown RBP eCLIP11.67□□□□□ -0.54
FXR1-203ENST00000445140 ZNF831Q5JPB2 1677 aa11.67□□□□□ -0.54
FXR1-203ENST00000445140 HTATSF1O43719 755 aaKnown RBP11.66□□□□□ -0.54
FXR1-203ENST00000445140 RUNDC1Q96C34 613 aa11.66□□□□□ -0.54
FXR1-203ENST00000445140 BTG4Q9NY30 223 aa11.66□□□□□ -0.54
FXR1-203ENST00000445140 AMOTQ4VCS5 1084 aa11.65□□□□□ -0.54
FXR1-203ENST00000445140 NBPF6Q5VWK0 638 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms