RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 C11orf95C9JLR9 678 aaPredicted RBP21.94■■□□□ 1.1
SEC13-213ENST00000445064 CSB-PGBD3P0DP91 1061 aa21.94■■□□□ 1.1
SEC13-213ENST00000445064 TMC1Q8TDI8 760 aa21.94■■□□□ 1.1
SEC13-213ENST00000445064 NBPF14Q5TI25 921 aa21.93■■□□□ 1.1
SEC13-213ENST00000445064 RGPD5Q99666 1765 aa21.93■■□□□ 1.1
SEC13-213ENST00000445064 SBNO2Q9Y2G9 1366 aa21.93■■□□□ 1.1
SEC13-213ENST00000445064 OVOS2A0A0G2JMS6 1433 aa21.92■■□□□ 1.1
SEC13-213ENST00000445064 OVOS2A0A0J9YW53 1432 aa21.92■■□□□ 1.1
SEC13-213ENST00000445064 OVOS2Q6IE36 1432 aa21.92■■□□□ 1.1
SEC13-213ENST00000445064 TONSLQ96HA7 1378 aa21.92■■□□□ 1.1
SEC13-213ENST00000445064 SLC12A5Q9H2X9 1139 aa21.92■■□□□ 1.1
SEC13-213ENST00000445064 PTF1AQ7RTS3 328 aa21.91■■□□□ 1.1
SEC13-213ENST00000445064 MARCH10Q8NA82 808 aaPredicted RBP21.91■■□□□ 1.1
SEC13-213ENST00000445064 CARD10Q9BWT7 1032 aa21.91■■□□□ 1.1
SEC13-213ENST00000445064 NME9Q86XW9 330 aa21.9■■□□□ 1.1
SEC13-213ENST00000445064 RREB1Q92766 1687 aa21.9■■□□□ 1.1
SEC13-213ENST00000445064 LRRC37A3O60309 1634 aa21.9■■□□□ 1.1
SEC13-213ENST00000445064 PEAK1Q9H792 1746 aa21.89■■□□□ 1.1
SEC13-213ENST00000445064 CDCA7Q9BWT1 371 aaPredicted RBP21.89■■□□□ 1.09
SEC13-213ENST00000445064 NFAT5O94916 1531 aa21.89■■□□□ 1.09
SEC13-213ENST00000445064 CD163L1Q9NR16 1453 aa21.89■■□□□ 1.09
SEC13-213ENST00000445064 NUP188Q5SRE5 1749 aa21.89■■□□□ 1.09
SEC13-213ENST00000445064 HDGFL2Q7Z4V5 671 aaPredicted RBP21.88■■□□□ 1.09
SEC13-213ENST00000445064 MON2Q7Z3U7 1717 aa21.88■■□□□ 1.09
SEC13-213ENST00000445064 USP31Q70CQ4 1352 aa21.87■■□□□ 1.09
SEC13-213ENST00000445064 EXOC5O00471 708 aa21.87■■□□□ 1.09
SEC13-213ENST00000445064 PLSCR1O15162 318 aa21.87■■□□□ 1.09
SEC13-213ENST00000445064 BCL11BQ9C0K0 894 aaPredicted RBP21.86■■□□□ 1.09
SEC13-213ENST00000445064 SBF2Q86WG5 1849 aa21.85■■□□□ 1.09
SEC13-213ENST00000445064 TERF2IPQ9NYB0 399 aa21.84■■□□□ 1.09
SEC13-213ENST00000445064 WNK3Q9BYP7 1800 aa21.84■■□□□ 1.09
SEC13-213ENST00000445064 CCDC7Q96M83 1385 aa21.83■■□□□ 1.08
SEC13-213ENST00000445064 PUS7Q96PZ0 661 aaKnown RBP21.82■■□□□ 1.08
SEC13-213ENST00000445064 NLRP2Q9NX02 1062 aa21.82■■□□□ 1.08
SEC13-213ENST00000445064 ST20-MTHFSA0A0A6YYL1 179 aa21.81■■□□□ 1.08
SEC13-213ENST00000445064 PROM2Q8N271 834 aa21.81■■□□□ 1.08
SEC13-213ENST00000445064 EDC4Q6P2E9 1401 aaKnown RBP21.8■■□□□ 1.08
SEC13-213ENST00000445064 A0A1W2PP64 1363 aa21.8■■□□□ 1.08
SEC13-213ENST00000445064 TESK2Q96S53 571 aa21.8■■□□□ 1.08
SEC13-213ENST00000445064 ERBB3P21860 1342 aa21.8■■□□□ 1.08
SEC13-213ENST00000445064 ANKRD24Q8TF21 1146 aa21.79■■□□□ 1.08
SEC13-213ENST00000445064 BCL9O00512 1426 aa21.79■■□□□ 1.08
SEC13-213ENST00000445064 KCNQ2O43526 872 aa21.78■■□□□ 1.08
SEC13-213ENST00000445064 SPON1Q9HCB6 807 aa21.78■■□□□ 1.08
SEC13-213ENST00000445064 ANO8Q9HCE9 1232 aaPredicted RBP21.78■■□□□ 1.08
SEC13-213ENST00000445064 ABCC6O95255 1503 aa21.78■■□□□ 1.08
SEC13-213ENST00000445064 USP54Q70EL1 1684 aa21.78■■□□□ 1.08
SEC13-213ENST00000445064 LTN1O94822 1766 aa21.76■■□□□ 1.07
SEC13-213ENST00000445064 IL2RBP14784 551 aa21.76■■□□□ 1.07
SEC13-213ENST00000445064 RGPD3A6NKT7 1758 aaPredicted RBP21.75■■□□□ 1.07
SEC13-213ENST00000445064 RGPD4Q7Z3J3 1758 aa21.75■■□□□ 1.07
SEC13-213ENST00000445064 TRIM26Q12899 539 aaPredicted RBP21.75■■□□□ 1.07
SEC13-213ENST00000445064 TXNRD1Q16881 649 aa21.75■■□□□ 1.07
SEC13-213ENST00000445064 ACSBG1Q96GR2 724 aa21.75■■□□□ 1.07
SEC13-213ENST00000445064 PPP1R1BQ9UD71 204 aaPredicted RBP21.74■■□□□ 1.07
SEC13-213ENST00000445064 TNS2Q63HR2 1409 aa21.73■■□□□ 1.07
SEC13-213ENST00000445064 IP6K1Q92551 441 aa21.73■■□□□ 1.07
SEC13-213ENST00000445064 LTV1Q96GA3 475 aaPredicted RBP21.73■■□□□ 1.07
SEC13-213ENST00000445064 PDGFDQ9GZP0 370 aaPredicted RBP21.73■■□□□ 1.07
SEC13-213ENST00000445064 FBLN1P23142 703 aa21.72■■□□□ 1.07
SEC13-213ENST00000445064 SLC24A1O60721 1099 aa21.71■■□□□ 1.07
SEC13-213ENST00000445064 COG3Q96JB2 828 aa21.71■■□□□ 1.07
SEC13-213ENST00000445064 STK32BQ9NY57 414 aa21.69■■□□□ 1.06
SEC13-213ENST00000445064 NINLQ9Y2I6 1382 aa21.69■■□□□ 1.06
SEC13-213ENST00000445064 MAP3K19Q56UN5 1328 aa21.67■■□□□ 1.06
SEC13-213ENST00000445064 ZBTB7AO95365 584 aa21.67■■□□□ 1.06
SEC13-213ENST00000445064 AMPHP49418 695 aa21.67■■□□□ 1.06
SEC13-213ENST00000445064 SLC15A2Q16348 729 aa21.67■■□□□ 1.06
SEC13-213ENST00000445064 DDX54Q8TDD1 881 aaKnown RBP21.67■■□□□ 1.06
SEC13-213ENST00000445064 TMF1P82094 1093 aa21.66■■□□□ 1.06
SEC13-213ENST00000445064 HOXC9P31274 260 aa21.65■■□□□ 1.06
SEC13-213ENST00000445064 ATF5Q9Y2D1 282 aaPredicted RBP21.65■■□□□ 1.06
SEC13-213ENST00000445064 NHSQ6T4R5 1651 aa21.65■■□□□ 1.06
SEC13-213ENST00000445064 CASZ1Q86V15 1759 aa21.64■■□□□ 1.06
SEC13-213ENST00000445064 ANKRD36BQ8N2N9 1353 aa21.63■■□□□ 1.05
SEC13-213ENST00000445064 FYB1O15117 783 aa21.63■■□□□ 1.05
SEC13-213ENST00000445064 GGNBP2Q9H3C7 697 aa21.63■■□□□ 1.05
SEC13-213ENST00000445064 USP47Q96K76 1375 aa21.62■■□□□ 1.05
SEC13-213ENST00000445064 RRS1Q15050 365 aaKnown RBP21.61■■□□□ 1.05
SEC13-213ENST00000445064 PTGER2P43116 358 aa21.6■■□□□ 1.05
SEC13-213ENST00000445064 KAT6BQ8WYB5 2073 aa21.59■■□□□ 1.05
SEC13-213ENST00000445064 LRRC4BQ9NT99 713 aa21.59■■□□□ 1.05
SEC13-213ENST00000445064 BTAF1O14981 1849 aa21.59■■□□□ 1.05
SEC13-213ENST00000445064 DCAF8L1A6NGE4 600 aa21.58■■□□□ 1.05
SEC13-213ENST00000445064 FAM208AQ9UK61 1670 aaKnown RBP21.57■■□□□ 1.04
SEC13-213ENST00000445064 RGPD2P0DJD1 1756 aa21.57■■□□□ 1.04
SEC13-213ENST00000445064 NBPF6Q5VWK0 638 aa21.57■■□□□ 1.04
SEC13-213ENST00000445064 ZCRB1Q8TBF4 217 aaKnown RBP21.57■■□□□ 1.04
SEC13-213ENST00000445064 SYTL4Q96C24 671 aaPredicted RBP21.57■■□□□ 1.04
SEC13-213ENST00000445064 NBPF4Q96M43 638 aa21.57■■□□□ 1.04
SEC13-213ENST00000445064 YY1P25490 414 aa21.56■■□□□ 1.04
SEC13-213ENST00000445064 PRIM1P49642 420 aaKnown RBP21.56■■□□□ 1.04
SEC13-213ENST00000445064 CDCA8Q53HL2 280 aa21.56■■□□□ 1.04
SEC13-213ENST00000445064 MTFR1LQ9H019 292 aa21.56■■□□□ 1.04
SEC13-213ENST00000445064 ZNF827Q17R98 1081 aa21.55■■□□□ 1.04
SEC13-213ENST00000445064 USHBP1Q8N6Y0 703 aa21.55■■□□□ 1.04
SEC13-213ENST00000445064 KCNQ4P56696 695 aa21.53■■□□□ 1.04
SEC13-213ENST00000445064 HSP90AB2PQ58FF8 381 aa21.53■■□□□ 1.04
SEC13-213ENST00000445064 CARD14Q9BXL6 1004 aa21.53■■□□□ 1.04
SEC13-213ENST00000445064 MYOM1P52179 1685 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms