RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 DDX46Q7L014 1031 aaKnown RBP5.12□□□□□ -1.59
UBR3-206ENST00000444475 FAM217BQ9NTX9 383 aaPredicted RBP5.12□□□□□ -1.59
UBR3-206ENST00000444475 TPX2Q9ULW0 747 aaKnown RBP5.12□□□□□ -1.59
UBR3-206ENST00000444475 FCHSD2O94868 740 aa5.12□□□□□ -1.59
UBR3-206ENST00000444475 GTF2F1P35269 517 aaKnown RBP eCLIP5.12□□□□□ -1.59
UBR3-206ENST00000444475 FANCCQ00597 558 aa5.12□□□□□ -1.59
UBR3-206ENST00000444475 TUSC1Q2TAM9 212 aa5.12□□□□□ -1.59
UBR3-206ENST00000444475 ZKSCAN2Q63HK3 967 aa5.12□□□□□ -1.59
UBR3-206ENST00000444475 GET4Q7L5D6 327 aaPredicted RBP5.12□□□□□ -1.59
UBR3-206ENST00000444475 FILIP1Q7Z7B0 1213 aa5.12□□□□□ -1.59
UBR3-206ENST00000444475 PDZRN3Q9UPQ7 1066 aa5.12□□□□□ -1.59
UBR3-206ENST00000444475 S100BP04271 92 aaPredicted RBP5.11□□□□□ -1.59
UBR3-206ENST00000444475 PTGDRQ13258 359 aa5.11□□□□□ -1.59
UBR3-206ENST00000444475 TTC39BQ5VTQ0 682 aaPredicted RBP5.11□□□□□ -1.59
UBR3-206ENST00000444475 ASB16Q96NS5 453 aa5.11□□□□□ -1.59
UBR3-206ENST00000444475 LIMD1Q9UGP4 676 aa5.11□□□□□ -1.59
UBR3-206ENST00000444475 IFRD1O00458 451 aaPredicted RBP5.11□□□□□ -1.59
UBR3-206ENST00000444475 LZTS3O60299 673 aaPredicted RBP5.11□□□□□ -1.59
UBR3-206ENST00000444475 STK10O94804 968 aaKnown RBP5.11□□□□□ -1.59
UBR3-206ENST00000444475 CBLBQ13191 982 aa5.11□□□□□ -1.59
UBR3-206ENST00000444475 ENOX1Q8TC92 643 aaKnown RBP5.11□□□□□ -1.59
UBR3-206ENST00000444475 CLGNO14967 610 aa5.11□□□□□ -1.59
UBR3-206ENST00000444475 MAN1A1P33908 653 aa5.11□□□□□ -1.59
UBR3-206ENST00000444475 PPP1R18Q6NYC8 613 aa5.11□□□□□ -1.59
UBR3-206ENST00000444475 L3MBTL3Q96JM7 780 aaPredicted RBP5.11□□□□□ -1.59
UBR3-206ENST00000444475 APBA2Q99767 749 aa5.11□□□□□ -1.59
UBR3-206ENST00000444475 CHST12Q9NRB3 414 aa5.11□□□□□ -1.59
UBR3-206ENST00000444475 KLF15Q9UIH9 416 aa5.11□□□□□ -1.59
UBR3-206ENST00000444475 WWC3Q9ULE0 1092 aa5.11□□□□□ -1.59
UBR3-206ENST00000444475 ANP32CO43423 234 aa5.1□□□□□ -1.59
UBR3-206ENST00000444475 XRCC5P13010 732 aaKnown RBP5.1□□□□□ -1.59
UBR3-206ENST00000444475 GTF2E1P29083 439 aaPredicted RBP5.1□□□□□ -1.59
UBR3-206ENST00000444475 POU5F1BQ06416 359 aa5.1□□□□□ -1.59
UBR3-206ENST00000444475 TRIM34Q9BYJ4 488 aa5.1□□□□□ -1.59
UBR3-206ENST00000444475 ZRANB2O95218 330 aaKnown RBP eCLIP5.1□□□□□ -1.59
UBR3-206ENST00000444475 GNALP38405 381 aa5.1□□□□□ -1.59
UBR3-206ENST00000444475 MAPRE1Q15691 268 aaKnown RBP5.1□□□□□ -1.59
UBR3-206ENST00000444475 VPS72Q15906 364 aa5.1□□□□□ -1.59
UBR3-206ENST00000444475 WASHC4Q2M389 1173 aa5.1□□□□□ -1.59
UBR3-206ENST00000444475 PRR7Q8TB68 274 aa5.1□□□□□ -1.59
UBR3-206ENST00000444475 TNFRSF10BO14763 440 aa5.1□□□□□ -1.59
UBR3-206ENST00000444475 C1orf131Q8NDD1 294 aaKnown RBP5.1□□□□□ -1.59
UBR3-206ENST00000444475 SNRNP27Q8WVK2 155 aaKnown RBP5.1□□□□□ -1.59
UBR3-206ENST00000444475 JDP2Q8WYK2 163 aa5.1□□□□□ -1.59
UBR3-206ENST00000444475 NUTM2FA1L443 756 aa5.09□□□□□ -1.59
UBR3-206ENST00000444475 VDRP11473 427 aa5.09□□□□□ -1.59
UBR3-206ENST00000444475 PUS10Q3MIT2 529 aaKnown RBP5.09□□□□□ -1.59
UBR3-206ENST00000444475 PLEKHG4Q58EX7 1191 aa5.09□□□□□ -1.59
UBR3-206ENST00000444475 IER2Q9BTL4 223 aa5.09□□□□□ -1.59
UBR3-206ENST00000444475 MUC3BQ9H195 1237 aa5.09□□□□□ -1.59
UBR3-206ENST00000444475 CD53P19397 219 aa5.09□□□□□ -1.59
UBR3-206ENST00000444475 PRIM1P49642 420 aaKnown RBP5.09□□□□□ -1.59
UBR3-206ENST00000444475 MS4A4AQ96JQ5 239 aa5.09□□□□□ -1.59
UBR3-206ENST00000444475 GOLGA6CA6NDK9 693 aa5.09□□□□□ -1.6
UBR3-206ENST00000444475 GOLGA6BA6NDN3 693 aa5.09□□□□□ -1.6
UBR3-206ENST00000444475 GOLGA6DP0CG33 693 aa5.09□□□□□ -1.6
UBR3-206ENST00000444475 NLRP6P59044 892 aa5.09□□□□□ -1.6
UBR3-206ENST00000444475 SERINC3Q13530 473 aa5.09□□□□□ -1.6
UBR3-206ENST00000444475 PAGR1Q9BTK6 254 aa5.09□□□□□ -1.6
UBR3-206ENST00000444475 GOLGA6AQ9NYA3 693 aa5.09□□□□□ -1.6
UBR3-206ENST00000444475 SFMBT1Q9UHJ3 866 aa5.09□□□□□ -1.6
UBR3-206ENST00000444475 PHF8Q9UPP1 1060 aa5.09□□□□□ -1.6
UBR3-206ENST00000444475 A6NJY4 79 aa5.08□□□□□ -1.6
UBR3-206ENST00000444475 CASC1Q6TDU7 716 aa5.08□□□□□ -1.6
UBR3-206ENST00000444475 RAVER1Q8IY67 606 aaKnown RBP5.08□□□□□ -1.6
UBR3-206ENST00000444475 PMFBP1Q8TBY8 1022 aa5.08□□□□□ -1.6
UBR3-206ENST00000444475 AKT1S1Q96B36 256 aa5.08□□□□□ -1.6
UBR3-206ENST00000444475 ACBD3Q9H3P7 528 aa5.08□□□□□ -1.6
UBR3-206ENST00000444475 METTL5Q9NRN9 209 aaKnown RBP5.08□□□□□ -1.6
UBR3-206ENST00000444475 SCP2P22307 547 aa5.08□□□□□ -1.6
UBR3-206ENST00000444475 SETDB1Q15047 1291 aa5.08□□□□□ -1.6
UBR3-206ENST00000444475 TBC1D9Q6ZT07 1266 aa5.08□□□□□ -1.6
UBR3-206ENST00000444475 TSC1Q92574 1164 aa5.08□□□□□ -1.6
UBR3-206ENST00000444475 CLP1Q92989 425 aaKnown RBP5.08□□□□□ -1.6
UBR3-206ENST00000444475 DNAJC6O75061 913 aa5.08□□□□□ -1.6
UBR3-206ENST00000444475 TNNI2P48788 182 aa5.08□□□□□ -1.6
UBR3-206ENST00000444475 NBPF20Q3BBV1 942 aa5.08□□□□□ -1.6
UBR3-206ENST00000444475 DHX16O60231 1041 aaKnown RBP5.07□□□□□ -1.6
UBR3-206ENST00000444475 TGFB3P10600 412 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 SOGA3Q5TF21 947 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 CEP126Q9P2H0 1117 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 FRMD4BQ9Y2L6 1034 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 NDUFB9Q9Y6M9 179 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 NACADO15069 1562 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 POLD1P28340 1107 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 SIM2Q14190 667 aaPredicted RBP5.07□□□□□ -1.6
UBR3-206ENST00000444475 C1orf216Q8TAB5 229 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 FRMD6Q96NE9 622 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 ENAMQ9NRM1 1142 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 EGFL7Q9UHF1 273 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 TIMM44O43615 452 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 FAM200BP0CF97 657 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 SCNN1AP37088 669 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 MDM2Q00987 491 aaPredicted RBP5.07□□□□□ -1.6
UBR3-206ENST00000444475 MCF2L2Q86YR7 1114 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 PRKAB1Q9Y478 270 aa5.07□□□□□ -1.6
UBR3-206ENST00000444475 TMEM238LA0A1B0GVL6 79 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 VAC14Q08AM6 782 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 SAMD3Q8N6K7 520 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 RNPC3Q96LT9 517 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms