RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 ANKRD36BQ8N2N9 1353 aa23.3■■□□□ 1.32
TSPAN9-204ENST00000444315 EIF4G2P78344 907 aaKnown RBP eCLIP23.3■■□□□ 1.32
TSPAN9-204ENST00000444315 COG3Q96JB2 828 aa23.3■■□□□ 1.32
TSPAN9-204ENST00000444315 CRB1P82279 1406 aa23.3■■□□□ 1.32
TSPAN9-204ENST00000444315 BLMP54132 1417 aaPredicted RBP23.29■■□□□ 1.32
TSPAN9-204ENST00000444315 NFAT5O94916 1531 aa23.28■■□□□ 1.32
TSPAN9-204ENST00000444315 USP31Q70CQ4 1352 aa23.28■■□□□ 1.32
TSPAN9-204ENST00000444315 FAM182BQ5T319 152 aa23.28■■□□□ 1.32
TSPAN9-204ENST00000444315 ARHGEF25Q86VW2 580 aa23.28■■□□□ 1.32
TSPAN9-204ENST00000444315 USP54Q70EL1 1684 aa23.28■■□□□ 1.32
TSPAN9-204ENST00000444315 THRAP3Q9Y2W1 955 aaKnown RBP23.27■■□□□ 1.32
TSPAN9-204ENST00000444315 EP400Q96L91 3159 aa23.26■■□□□ 1.31
TSPAN9-204ENST00000444315 BARGINQ6ZT62 677 aa23.26■■□□□ 1.31
TSPAN9-204ENST00000444315 COL18A1P39060 1754 aa23.25■■□□□ 1.31
TSPAN9-204ENST00000444315 WDR17Q8IZU2 1322 aa23.25■■□□□ 1.31
TSPAN9-204ENST00000444315 KIF20BQ96Q89 1820 aa23.24■■□□□ 1.31
TSPAN9-204ENST00000444315 AXIN2Q9Y2T1 843 aa23.24■■□□□ 1.31
TSPAN9-204ENST00000444315 RGPD1P0DJD0 1748 aa23.23■■□□□ 1.31
TSPAN9-204ENST00000444315 HSPA5P11021 654 aaKnown RBP23.23■■□□□ 1.31
TSPAN9-204ENST00000444315 BAG6P46379 1132 aa23.22■■□□□ 1.31
TSPAN9-204ENST00000444315 OVOS2A0A0J9YW53 1432 aa23.22■■□□□ 1.31
TSPAN9-204ENST00000444315 OVOS2Q6IE36 1432 aa23.22■■□□□ 1.31
TSPAN9-204ENST00000444315 ABCC6O95255 1503 aa23.22■■□□□ 1.31
TSPAN9-204ENST00000444315 MYOM1P52179 1685 aa23.22■■□□□ 1.31
TSPAN9-204ENST00000444315 NLRP2Q9NX02 1062 aa23.21■■□□□ 1.31
TSPAN9-204ENST00000444315 AMPHP49418 695 aa23.2■■□□□ 1.3
TSPAN9-204ENST00000444315 FAM196AQ6ZSG2 479 aa23.2■■□□□ 1.3
TSPAN9-204ENST00000444315 WNK3Q9BYP7 1800 aa23.19■■□□□ 1.3
TSPAN9-204ENST00000444315 PARP4Q9UKK3 1724 aaKnown RBP23.19■■□□□ 1.3
TSPAN9-204ENST00000444315 DDB1Q16531 1140 aa23.19■■□□□ 1.3
TSPAN9-204ENST00000444315 DEFB132Q7Z7B7 95 aa23.19■■□□□ 1.3
TSPAN9-204ENST00000444315 LTV1Q96GA3 475 aaPredicted RBP23.19■■□□□ 1.3
TSPAN9-204ENST00000444315 GGNBP2Q9H3C7 697 aa23.19■■□□□ 1.3
TSPAN9-204ENST00000444315 NSD3Q9BZ95 1437 aa23.17■■□□□ 1.3
TSPAN9-204ENST00000444315 ANKRD24Q8TF21 1146 aa23.17■■□□□ 1.3
TSPAN9-204ENST00000444315 CDCA7Q9BWT1 371 aaPredicted RBP23.16■■□□□ 1.3
TSPAN9-204ENST00000444315 CARD10Q9BWT7 1032 aa23.16■■□□□ 1.3
TSPAN9-204ENST00000444315 LRRC37A3O60309 1634 aa23.15■■□□□ 1.3
TSPAN9-204ENST00000444315 CCDC7Q96M83 1385 aa23.15■■□□□ 1.3
TSPAN9-204ENST00000444315 TRIM37O94972 964 aa23.15■■□□□ 1.3
TSPAN9-204ENST00000444315 ERBB3P21860 1342 aa23.13■■□□□ 1.29
TSPAN9-204ENST00000444315 OVOS2A0A0G2JMS6 1433 aa23.12■■□□□ 1.29
TSPAN9-204ENST00000444315 FYB1O15117 783 aa23.12■■□□□ 1.29
TSPAN9-204ENST00000444315 IP6K1Q92551 441 aa23.11■■□□□ 1.29
TSPAN9-204ENST00000444315 FAM208AQ9UK61 1670 aaKnown RBP23.11■■□□□ 1.29
TSPAN9-204ENST00000444315 TNS1Q9HBL0 1735 aaKnown RBP23.11■■□□□ 1.29
TSPAN9-204ENST00000444315 CGNL1Q0VF96 1302 aa23.1■■□□□ 1.29
TSPAN9-204ENST00000444315 MAP3K19Q56UN5 1328 aa23.1■■□□□ 1.29
TSPAN9-204ENST00000444315 SMG6Q86US8 1419 aaKnown RBP23.1■■□□□ 1.29
TSPAN9-204ENST00000444315 C11orf95C9JLR9 678 aaPredicted RBP23.1■■□□□ 1.29
TSPAN9-204ENST00000444315 EXOC5O00471 708 aa23.1■■□□□ 1.29
TSPAN9-204ENST00000444315 APBA3O96018 575 aa23.1■■□□□ 1.29
TSPAN9-204ENST00000444315 RRS1Q15050 365 aaKnown RBP23.1■■□□□ 1.29
TSPAN9-204ENST00000444315 FBLN1P23142 703 aa23.09■■□□□ 1.29
TSPAN9-204ENST00000444315 EN1Q05925 392 aaPredicted RBP23.09■■□□□ 1.29
TSPAN9-204ENST00000444315 PPM1GO15355 546 aaPredicted RBP23.07■■□□□ 1.28
TSPAN9-204ENST00000444315 IL2RBP14784 551 aa23.07■■□□□ 1.28
TSPAN9-204ENST00000444315 HOXC9P31274 260 aa23.07■■□□□ 1.28
TSPAN9-204ENST00000444315 RTL1A6NKG5 1358 aa23.06■■□□□ 1.28
TSPAN9-204ENST00000444315 CARD14Q9BXL6 1004 aa23.06■■□□□ 1.28
TSPAN9-204ENST00000444315 TNS2Q63HR2 1409 aa23.03■■□□□ 1.28
TSPAN9-204ENST00000444315 PANK3Q9H999 370 aa23.03■■□□□ 1.28
TSPAN9-204ENST00000444315 KAT6BQ8WYB5 2073 aa23.02■■□□□ 1.28
TSPAN9-204ENST00000444315 DISP2A7MBM2 1401 aa23.02■■□□□ 1.28
TSPAN9-204ENST00000444315 TNNT2P45379 298 aaPredicted RBP23.02■■□□□ 1.28
TSPAN9-204ENST00000444315 RGPD2P0DJD1 1756 aa23.01■■□□□ 1.27
TSPAN9-204ENST00000444315 EZH2Q15910 746 aaKnown RBP23.01■■□□□ 1.27
TSPAN9-204ENST00000444315 FLT4P35916 1363 aa23.01■■□□□ 1.27
TSPAN9-204ENST00000444315 ANKRD26Q9UPS8 1709 aa23■■□□□ 1.27
TSPAN9-204ENST00000444315 MARCH10Q8NA82 808 aaPredicted RBP23■■□□□ 1.27
TSPAN9-204ENST00000444315 SBF2Q86WG5 1849 aa22.99■■□□□ 1.27
TSPAN9-204ENST00000444315 PEAK1Q9H792 1746 aa22.99■■□□□ 1.27
TSPAN9-204ENST00000444315 KNSTRNQ9Y448 316 aa22.98■■□□□ 1.27
TSPAN9-204ENST00000444315 MAP2P11137 1827 aaKnown RBP22.98■■□□□ 1.27
TSPAN9-204ENST00000444315 PSDA5PKW4 1024 aaPredicted RBP22.97■■□□□ 1.27
TSPAN9-204ENST00000444315 DDX54Q8TDD1 881 aaKnown RBP22.97■■□□□ 1.27
TSPAN9-204ENST00000444315 EMILIN1Q9Y6C2 1016 aa22.97■■□□□ 1.27
TSPAN9-204ENST00000444315 USHBP1Q8N6Y0 703 aa22.96■■□□□ 1.27
TSPAN9-204ENST00000444315 RAPGEF4Q8WZA2 1011 aa22.96■■□□□ 1.27
TSPAN9-204ENST00000444315 PARD3Q8TEW0 1356 aa22.96■■□□□ 1.27
TSPAN9-204ENST00000444315 HSP90AB2PQ58FF8 381 aa22.95■■□□□ 1.26
TSPAN9-204ENST00000444315 ACSBG1Q96GR2 724 aa22.95■■□□□ 1.26
TSPAN9-204ENST00000444315 INSRP06213 1382 aa22.94■■□□□ 1.26
TSPAN9-204ENST00000444315 KIF24Q5T7B8 1368 aa22.94■■□□□ 1.26
TSPAN9-204ENST00000444315 NBPF14Q5TI25 921 aa22.94■■□□□ 1.26
TSPAN9-204ENST00000444315 BCL11BQ9C0K0 894 aaPredicted RBP22.94■■□□□ 1.26
TSPAN9-204ENST00000444315 KIF7Q2M1P5 1343 aa22.93■■□□□ 1.26
TSPAN9-204ENST00000444315 MORC1Q86VD1 984 aa22.93■■□□□ 1.26
TSPAN9-204ENST00000444315 TATP17735 454 aaPredicted RBP22.92■■□□□ 1.26
TSPAN9-204ENST00000444315 CAMKK2Q96RR4 588 aa22.92■■□□□ 1.26
TSPAN9-204ENST00000444315 NSD2O96028 1365 aa22.91■■□□□ 1.26
TSPAN9-204ENST00000444315 R3HDM1Q15032 1099 aaKnown RBP22.91■■□□□ 1.26
TSPAN9-204ENST00000444315 RREB1Q92766 1687 aa22.9■■□□□ 1.26
TSPAN9-204ENST00000444315 NBPF6Q5VWK0 638 aa22.9■■□□□ 1.26
TSPAN9-204ENST00000444315 NBPF4Q96M43 638 aa22.9■■□□□ 1.26
TSPAN9-204ENST00000444315 NUP188Q5SRE5 1749 aa22.89■■□□□ 1.26
TSPAN9-204ENST00000444315 CNGB1Q14028 1251 aaPredicted RBP22.89■■□□□ 1.25
TSPAN9-204ENST00000444315 ZCRB1Q8TBF4 217 aaKnown RBP22.89■■□□□ 1.25
TSPAN9-204ENST00000444315 SYTL4Q96C24 671 aaPredicted RBP22.89■■□□□ 1.25
TSPAN9-204ENST00000444315 NHSQ6T4R5 1651 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms