RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 ZNF287Q9HBT7 754 aa13.41□□□□□ -0.26
FN1-211ENST00000443816 BIVM-ERCC5R4GMW8 1640 aa13.41□□□□□ -0.26
FN1-211ENST00000443816 SLC4A2P04920 1241 aa13.41□□□□□ -0.26
FN1-211ENST00000443816 ZFYVE27Q5T4F4 411 aa13.41□□□□□ -0.26
FN1-211ENST00000443816 CCDC173Q0VFZ6 552 aa13.41□□□□□ -0.26
FN1-211ENST00000443816 RAPGEF6Q8TEU7 1601 aa13.41□□□□□ -0.26
FN1-211ENST00000443816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.4□□□□□ -0.26
FN1-211ENST00000443816 NUDT16Q96DE0 195 aaKnown RBP13.4□□□□□ -0.26
FN1-211ENST00000443816 NGLY1Q96IV0 654 aa13.4□□□□□ -0.26
FN1-211ENST00000443816 PPP2R1AP30153 589 aa13.4□□□□□ -0.26
FN1-211ENST00000443816 ANKRD1Q15327 319 aa13.4□□□□□ -0.26
FN1-211ENST00000443816 SLC12A5Q9H2X9 1139 aa13.4□□□□□ -0.26
FN1-211ENST00000443816 SYCP1Q15431 976 aa13.4□□□□□ -0.26
FN1-211ENST00000443816 PPP6R1Q9UPN7 881 aa13.4□□□□□ -0.26
FN1-211ENST00000443816 CCDC69A6NI79 296 aa13.4□□□□□ -0.26
FN1-211ENST00000443816 TRIM22Q8IYM9 498 aa13.4□□□□□ -0.26
FN1-211ENST00000443816 SRCIN1Q9C0H9 1055 aa13.4□□□□□ -0.26
FN1-211ENST00000443816 KRT18P05783 430 aaKnown RBP13.39□□□□□ -0.27
FN1-211ENST00000443816 KIF21AQ7Z4S6 1674 aa13.39□□□□□ -0.27
FN1-211ENST00000443816 MPHOSPH10O00566 681 aaKnown RBP13.39□□□□□ -0.27
FN1-211ENST00000443816 MAGEC2Q9UBF1 373 aaPredicted RBP13.39□□□□□ -0.27
FN1-211ENST00000443816 GCC1Q96CN9 775 aa13.39□□□□□ -0.27
FN1-211ENST00000443816 AMOTQ4VCS5 1084 aa13.39□□□□□ -0.27
FN1-211ENST00000443816 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
FN1-211ENST00000443816 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
FN1-211ENST00000443816 ZC3H6P61129 1189 aaKnown RBP13.39□□□□□ -0.27
FN1-211ENST00000443816 MYO6Q9UM54 1294 aa13.39□□□□□ -0.27
FN1-211ENST00000443816 XPCQ01831 940 aaPredicted RBP13.38□□□□□ -0.27
FN1-211ENST00000443816 DENND4BO75064 1496 aaPredicted RBP13.38□□□□□ -0.27
FN1-211ENST00000443816 LRRCC1Q9C099 1032 aa13.38□□□□□ -0.27
FN1-211ENST00000443816 TSPOAP1O95153 1857 aa13.38□□□□□ -0.27
FN1-211ENST00000443816 PAF1Q8N7H5 531 aa13.38□□□□□ -0.27
FN1-211ENST00000443816 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
FN1-211ENST00000443816 PANK1Q8TE04 598 aa13.38□□□□□ -0.27
FN1-211ENST00000443816 TRIM21P19474 475 aaKnown RBP13.38□□□□□ -0.27
FN1-211ENST00000443816 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
FN1-211ENST00000443816 PBRM1Q86U86 1689 aa13.38□□□□□ -0.27
FN1-211ENST00000443816 FANCAO15360 1455 aa13.38□□□□□ -0.27
FN1-211ENST00000443816 ZNF396Q96N95 335 aaPredicted RBP13.38□□□□□ -0.27
FN1-211ENST00000443816 WDR63Q8IWG1 891 aa13.37□□□□□ -0.27
FN1-211ENST00000443816 SOGA3Q5TF21 947 aa13.37□□□□□ -0.27
FN1-211ENST00000443816 C22orf23Q9BZE7 217 aa13.37□□□□□ -0.27
FN1-211ENST00000443816 ADAMTS2O95450 1211 aa13.37□□□□□ -0.27
FN1-211ENST00000443816 SDF4Q9BRK5 362 aa13.37□□□□□ -0.27
FN1-211ENST00000443816 PRXQ9BXM0 1461 aa13.37□□□□□ -0.27
FN1-211ENST00000443816 FKBP4Q02790 459 aaKnown RBP eCLIP13.37□□□□□ -0.27
FN1-211ENST00000443816 JMYQ8N9B5 988 aa13.37□□□□□ -0.27
FN1-211ENST00000443816 CHMP5Q9NZZ3 219 aa13.37□□□□□ -0.27
FN1-211ENST00000443816 NOB1Q9ULX3 412 aaKnown RBP13.37□□□□□ -0.27
FN1-211ENST00000443816 SETQ01105 290 aaPredicted RBP13.36□□□□□ -0.27
FN1-211ENST00000443816 LRP2BPQ9P2M1 347 aa13.36□□□□□ -0.27
FN1-211ENST00000443816 CEP126Q9P2H0 1117 aa13.36□□□□□ -0.27
FN1-211ENST00000443816 PLB1Q6P1J6 1458 aa13.36□□□□□ -0.27
FN1-211ENST00000443816 HSP90AB3PQ58FF7 597 aa13.36□□□□□ -0.27
FN1-211ENST00000443816 CAVIN4Q5BKX8 364 aa13.36□□□□□ -0.27
FN1-211ENST00000443816 RRS1Q15050 365 aaKnown RBP13.36□□□□□ -0.27
FN1-211ENST00000443816 SIL1Q9H173 461 aa13.36□□□□□ -0.27
FN1-211ENST00000443816 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
FN1-211ENST00000443816 TDO2P48775 406 aa13.35□□□□□ -0.27
FN1-211ENST00000443816 CDR1P51861 262 aa13.35□□□□□ -0.27
FN1-211ENST00000443816 RPGRQ92834 1020 aaKnown RBP13.35□□□□□ -0.27
FN1-211ENST00000443816 AKAP2Q9Y2D5 859 aa13.35□□□□□ -0.27
FN1-211ENST00000443816 MSH6P52701 1360 aa13.35□□□□□ -0.27
FN1-211ENST00000443816 PIP4K2AP48426 406 aaPredicted RBP13.35□□□□□ -0.27
FN1-211ENST00000443816 STIM1Q13586 685 aa13.35□□□□□ -0.27
FN1-211ENST00000443816 FILIP1LQ4L180 1135 aa13.35□□□□□ -0.27
FN1-211ENST00000443816 DNAI2Q9GZS0 605 aa13.35□□□□□ -0.27
FN1-211ENST00000443816 ANKIB1Q9P2G1 1089 aa13.35□□□□□ -0.27
FN1-211ENST00000443816 KINO60870 393 aaKnown RBP13.35□□□□□ -0.27
FN1-211ENST00000443816 BICDL1Q6ZP65 573 aa13.35□□□□□ -0.27
FN1-211ENST00000443816 CDKL5O76039 1030 aa13.35□□□□□ -0.27
FN1-211ENST00000443816 CTNNA3Q9UI47 895 aa13.35□□□□□ -0.27
FN1-211ENST00000443816 FCHSD2O94868 740 aa13.35□□□□□ -0.27
FN1-211ENST00000443816 RUFY1Q96T51 708 aa13.35□□□□□ -0.27
FN1-211ENST00000443816 SLF2Q8IX21 1173 aa13.34□□□□□ -0.27
FN1-211ENST00000443816 NSD3Q9BZ95 1437 aa13.34□□□□□ -0.27
FN1-211ENST00000443816 EXOSC9Q06265 439 aaKnown RBP13.34□□□□□ -0.27
FN1-211ENST00000443816 SMARCE1Q969G3 411 aa13.34□□□□□ -0.27
FN1-211ENST00000443816 TNNT3P45378 269 aaPredicted RBP13.33□□□□□ -0.27
FN1-211ENST00000443816 ZNF592Q92610 1267 aa13.33□□□□□ -0.27
FN1-211ENST00000443816 NBPF1Q3BBV0 1214 aa13.33□□□□□ -0.28
FN1-211ENST00000443816 ZNF428Q96B54 188 aa13.33□□□□□ -0.28
FN1-211ENST00000443816 CADPS2Q86UW7 1296 aa13.33□□□□□ -0.28
FN1-211ENST00000443816 AK7Q96M32 723 aa13.33□□□□□ -0.28
FN1-211ENST00000443816 EXOC5O00471 708 aa13.32□□□□□ -0.28
FN1-211ENST00000443816 UBAC1Q9BSL1 405 aa13.32□□□□□ -0.28
FN1-211ENST00000443816 DESP17661 470 aa13.32□□□□□ -0.28
FN1-211ENST00000443816 RAI14Q9P0K7 980 aa13.32□□□□□ -0.28
FN1-211ENST00000443816 PDE3AQ14432 1141 aa13.32□□□□□ -0.28
FN1-211ENST00000443816 ZNF76P36508 570 aa13.32□□□□□ -0.28
FN1-211ENST00000443816 TNIP1Q15025 636 aa13.32□□□□□ -0.28
FN1-211ENST00000443816 NOL7Q9UMY1 257 aaKnown RBP13.32□□□□□ -0.28
FN1-211ENST00000443816 CYP46A1Q9Y6A2 500 aa13.31□□□□□ -0.28
FN1-211ENST00000443816 TOM1O60784 492 aa13.31□□□□□ -0.28
FN1-211ENST00000443816 METTL24Q5JXM2 366 aa13.31□□□□□ -0.28
FN1-211ENST00000443816 LARP1Q6PKG0 1096 aaKnown RBP13.31□□□□□ -0.28
FN1-211ENST00000443816 LUC7LQ9NQ29 371 aaKnown RBP13.31□□□□□ -0.28
FN1-211ENST00000443816 AACSQ86V21 672 aa13.31□□□□□ -0.28
FN1-211ENST00000443816 AMOTL2Q9Y2J4 779 aa13.31□□□□□ -0.28
FN1-211ENST00000443816 KDM4AO75164 1064 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms