RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 DHX37Q8IY37 1157 aaKnown RBP12.17□□□□□ -0.46
LIN54-202ENST00000442461 ESF1Q9H501 851 aaKnown RBP12.17□□□□□ -0.46
LIN54-202ENST00000442461 RNF187Q5TA31 235 aaPredicted RBP12.16□□□□□ -0.46
LIN54-202ENST00000442461 ZNF622Q969S3 477 aaKnown RBP eCLIP12.16□□□□□ -0.46
LIN54-202ENST00000442461 LRPPRCP42704 1394 aaKnown RBP12.16□□□□□ -0.46
LIN54-202ENST00000442461 GBP2P32456 591 aaPredicted RBP12.16□□□□□ -0.46
LIN54-202ENST00000442461 SAFB2Q14151 953 aaKnown RBP eCLIP12.16□□□□□ -0.46
LIN54-202ENST00000442461 CERS3Q8IU89 383 aa12.16□□□□□ -0.46
LIN54-202ENST00000442461 RBSNQ9H1K0 784 aa12.16□□□□□ -0.46
LIN54-202ENST00000442461 EXOSC9Q06265 439 aaKnown RBP12.15□□□□□ -0.46
LIN54-202ENST00000442461 ZRSR2Q15696 482 aaKnown RBP12.15□□□□□ -0.46
LIN54-202ENST00000442461 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.15□□□□□ -0.46
LIN54-202ENST00000442461 NAP1L1P55209 391 aaKnown RBP12.15□□□□□ -0.46
LIN54-202ENST00000442461 CAMK4Q16566 473 aa12.15□□□□□ -0.46
LIN54-202ENST00000442461 KIAA1328Q86T90 577 aa12.15□□□□□ -0.46
LIN54-202ENST00000442461 PPFIBP1Q86W92 1011 aa12.15□□□□□ -0.46
LIN54-202ENST00000442461 ZNF396Q96N95 335 aaPredicted RBP12.15□□□□□ -0.46
LIN54-202ENST00000442461 MYO6Q9UM54 1294 aa12.15□□□□□ -0.46
LIN54-202ENST00000442461 MCM3P25205 808 aa12.15□□□□□ -0.46
LIN54-202ENST00000442461 TRIM29Q14134 588 aa12.15□□□□□ -0.46
LIN54-202ENST00000442461 C14orf37Q86TY3 774 aa12.15□□□□□ -0.46
LIN54-202ENST00000442461 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.46
LIN54-202ENST00000442461 TERF2IPQ9NYB0 399 aa12.15□□□□□ -0.46
LIN54-202ENST00000442461 CASQ1P31415 396 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 ZNF445P59923 1031 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 GTF3C6Q969F1 213 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 FGD6Q6ZV73 1430 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 STK11IPQ8N1F8 1099 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 DHX29Q7Z478 1369 aaKnown RBP12.14□□□□□ -0.47
LIN54-202ENST00000442461 PLEKHH2Q8IVE3 1493 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 CCDC144AA2RUR9 1427 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 CAVIN2O95810 425 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 FOSBP53539 338 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 ARHGAP29Q52LW3 1261 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 IQCEQ6IPM2 695 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 LUZP1Q86V48 1076 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 PPM1EQ8WY54 764 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 TSC1Q92574 1164 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 MAP2K2P36507 400 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 WDR63Q8IWG1 891 aa12.14□□□□□ -0.47
LIN54-202ENST00000442461 EZRP15311 586 aaKnown RBP12.13□□□□□ -0.47
LIN54-202ENST00000442461 ZNF165P49910 485 aa12.13□□□□□ -0.47
LIN54-202ENST00000442461 UBE2HP62256 183 aa12.13□□□□□ -0.47
LIN54-202ENST00000442461 CEBPZQ03701 1054 aaKnown RBP12.13□□□□□ -0.47
LIN54-202ENST00000442461 PAIP2Q9BPZ3 127 aaKnown RBP12.13□□□□□ -0.47
LIN54-202ENST00000442461 NOB1Q9ULX3 412 aaKnown RBP12.13□□□□□ -0.47
LIN54-202ENST00000442461 FHOD3Q2V2M9 1422 aa12.13□□□□□ -0.47
LIN54-202ENST00000442461 DUSP27Q5VZP5 1158 aa12.13□□□□□ -0.47
LIN54-202ENST00000442461 ERO1AQ96HE7 468 aa12.13□□□□□ -0.47
LIN54-202ENST00000442461 SRRTQ9BXP5 876 aaKnown RBP12.13□□□□□ -0.47
LIN54-202ENST00000442461 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
LIN54-202ENST00000442461 ANO10Q9NW15 660 aa12.13□□□□□ -0.47
LIN54-202ENST00000442461 CFAP45Q9UL16 551 aa12.13□□□□□ -0.47
LIN54-202ENST00000442461 PLEKHH1Q9ULM0 1364 aa12.13□□□□□ -0.47
LIN54-202ENST00000442461 EBAG9O00559 213 aa12.13□□□□□ -0.47
LIN54-202ENST00000442461 TUBB4AP04350 444 aa12.13□□□□□ -0.47
LIN54-202ENST00000442461 KIF4BQ2VIQ3 1234 aa12.13□□□□□ -0.47
LIN54-202ENST00000442461 A0A1B0GUA9 196 aa12.12□□□□□ -0.47
LIN54-202ENST00000442461 ME1P48163 572 aa12.12□□□□□ -0.47
LIN54-202ENST00000442461 SCAND2PQ9GZW5 306 aaPredicted RBP12.12□□□□□ -0.47
LIN54-202ENST00000442461 SKILP12757 684 aa12.12□□□□□ -0.47
LIN54-202ENST00000442461 ATP6V1AP38606 617 aa12.12□□□□□ -0.47
LIN54-202ENST00000442461 GNAI1P63096 354 aa12.12□□□□□ -0.47
LIN54-202ENST00000442461 STK38Q15208 465 aa12.12□□□□□ -0.47
LIN54-202ENST00000442461 BMP2KLQ5H9B9 411 aa12.12□□□□□ -0.47
LIN54-202ENST00000442461 EFCC1Q9HA90 598 aa12.12□□□□□ -0.47
LIN54-202ENST00000442461 PPP6R1Q9UPN7 881 aa12.12□□□□□ -0.47
LIN54-202ENST00000442461 CYP46A1Q9Y6A2 500 aa12.12□□□□□ -0.47
LIN54-202ENST00000442461 MCM6Q14566 821 aa12.12□□□□□ -0.47
LIN54-202ENST00000442461 CFAP100Q494V2 611 aa12.12□□□□□ -0.47
LIN54-202ENST00000442461 ODF2Q5BJF6 829 aa12.12□□□□□ -0.47
LIN54-202ENST00000442461 ZSCAN31Q96LW9 406 aaPredicted RBP12.12□□□□□ -0.47
LIN54-202ENST00000442461 CPSF2Q9P2I0 782 aaKnown RBP12.12□□□□□ -0.47
LIN54-202ENST00000442461 SEC24BO95487 1268 aa12.11□□□□□ -0.47
LIN54-202ENST00000442461 DDX19AQ9NUU7 478 aaKnown RBP12.11□□□□□ -0.47
LIN54-202ENST00000442461 IFIT2P09913 472 aaKnown RBP12.11□□□□□ -0.47
LIN54-202ENST00000442461 CKAP2LQ8IYA6 745 aa12.11□□□□□ -0.47
LIN54-202ENST00000442461 FAM200AQ8TCP9 573 aa12.11□□□□□ -0.47
LIN54-202ENST00000442461 KIF5CO60282 957 aa12.11□□□□□ -0.47
LIN54-202ENST00000442461 RNF123Q5XPI4 1314 aa12.11□□□□□ -0.47
LIN54-202ENST00000442461 NACADO15069 1562 aa12.11□□□□□ -0.47
LIN54-202ENST00000442461 GOLGA6L9A6NEM1 432 aa12.11□□□□□ -0.47
LIN54-202ENST00000442461 NEFHP12036 1026 aa12.11□□□□□ -0.47
LIN54-202ENST00000442461 AKAP17AQ02040 695 aaKnown RBP12.11□□□□□ -0.47
LIN54-202ENST00000442461 CNTROBQ8N137 903 aa12.11□□□□□ -0.47
LIN54-202ENST00000442461 MX1P20591 662 aa12.1□□□□□ -0.47
LIN54-202ENST00000442461 STAC3Q96MF2 364 aa12.1□□□□□ -0.47
LIN54-202ENST00000442461 HSP90AB4PQ58FF6 505 aa12.1□□□□□ -0.47
LIN54-202ENST00000442461 GIMAP6Q6P9H5 292 aa12.1□□□□□ -0.47
LIN54-202ENST00000442461 NCOA1Q15788 1441 aa12.1□□□□□ -0.47
LIN54-202ENST00000442461 CCDC181Q5TID7 509 aa12.1□□□□□ -0.47
LIN54-202ENST00000442461 CCDC148Q8NFR7 591 aa12.1□□□□□ -0.47
LIN54-202ENST00000442461 CCDC47Q96A33 483 aaKnown RBP12.1□□□□□ -0.47
LIN54-202ENST00000442461 LRRC9Q6ZRR7 1453 aa12.1□□□□□ -0.47
LIN54-202ENST00000442461 RARSP54136 660 aaKnown RBP12.09□□□□□ -0.47
LIN54-202ENST00000442461 KDM4AO75164 1064 aa12.09□□□□□ -0.47
LIN54-202ENST00000442461 BRPF1P55201 1214 aaPredicted RBP12.09□□□□□ -0.47
LIN54-202ENST00000442461 ANKRD1Q15327 319 aa12.09□□□□□ -0.47
LIN54-202ENST00000442461 CEP57Q86XR8 500 aa12.09□□□□□ -0.47
LIN54-202ENST00000442461 NKTRP30414 1462 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms