RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 AXIN2Q9Y2T1 843 aa29.47■■■□□ 2.31
TMEM50B-204ENST00000442441 EVC2Q86UK5 1308 aa29.45■■■□□ 2.31
TMEM50B-204ENST00000442441 NINLQ9Y2I6 1382 aa29.45■■■□□ 2.31
TMEM50B-204ENST00000442441 CDCA7Q9BWT1 371 aaPredicted RBP29.45■■■□□ 2.31
TMEM50B-204ENST00000442441 PTF1AQ7RTS3 328 aa29.44■■■□□ 2.3
TMEM50B-204ENST00000442441 CPSF1Q10570 1443 aaKnown RBP29.44■■■□□ 2.3
TMEM50B-204ENST00000442441 MARCH10Q8NA82 808 aaPredicted RBP29.43■■■□□ 2.3
TMEM50B-204ENST00000442441 DCAF8L1A6NGE4 600 aa29.42■■■□□ 2.3
TMEM50B-204ENST00000442441 ARHGEF25Q86VW2 580 aa29.42■■■□□ 2.3
TMEM50B-204ENST00000442441 ANO8Q9HCE9 1232 aaPredicted RBP29.42■■■□□ 2.3
TMEM50B-204ENST00000442441 WNK3Q9BYP7 1800 aa29.42■■■□□ 2.3
TMEM50B-204ENST00000442441 BCL9O00512 1426 aa29.41■■■□□ 2.3
TMEM50B-204ENST00000442441 KCNH5Q8NCM2 988 aa29.41■■■□□ 2.3
TMEM50B-204ENST00000442441 ZNF692Q9BU19 519 aaPredicted RBP29.41■■■□□ 2.3
TMEM50B-204ENST00000442441 L3MBTL2Q969R5 705 aa29.4■■■□□ 2.3
TMEM50B-204ENST00000442441 TTC21BQ7Z4L5 1316 aa29.4■■■□□ 2.3
TMEM50B-204ENST00000442441 PROM2Q8N271 834 aa29.39■■■□□ 2.3
TMEM50B-204ENST00000442441 TRPM1Q7Z4N2 1603 aa29.38■■■□□ 2.29
TMEM50B-204ENST00000442441 CARD10Q9BWT7 1032 aa29.38■■■□□ 2.29
TMEM50B-204ENST00000442441 AKAP12Q02952 1782 aa29.37■■■□□ 2.29
TMEM50B-204ENST00000442441 CASZ1Q86V15 1759 aa29.37■■■□□ 2.29
TMEM50B-204ENST00000442441 CSB-PGBD3P0DP91 1061 aa29.37■■■□□ 2.29
TMEM50B-204ENST00000442441 SOX12O15370 315 aa29.36■■■□□ 2.29
TMEM50B-204ENST00000442441 RGPD5Q99666 1765 aa29.36■■■□□ 2.29
TMEM50B-204ENST00000442441 TTC21AQ8NDW8 1320 aa29.35■■■□□ 2.29
TMEM50B-204ENST00000442441 PDGFDQ9GZP0 370 aaPredicted RBP29.34■■■□□ 2.29
TMEM50B-204ENST00000442441 EXOC5O00471 708 aa29.32■■■□□ 2.28
TMEM50B-204ENST00000442441 TXNRD1Q16881 649 aa29.31■■■□□ 2.28
TMEM50B-204ENST00000442441 NFAT5O94916 1531 aa29.3■■■□□ 2.28
TMEM50B-204ENST00000442441 ZBTB7AO95365 584 aa29.3■■■□□ 2.28
TMEM50B-204ENST00000442441 ROCK2O75116 1388 aaKnown RBP29.29■■■□□ 2.28
TMEM50B-204ENST00000442441 CCDC7Q96M83 1385 aa29.29■■■□□ 2.28
TMEM50B-204ENST00000442441 STK32BQ9NY57 414 aa29.29■■■□□ 2.28
TMEM50B-204ENST00000442441 KTN1Q86UP2 1357 aaKnown RBP29.28■■■□□ 2.28
TMEM50B-204ENST00000442441 ABCC6O95255 1503 aa29.27■■■□□ 2.28
TMEM50B-204ENST00000442441 PTGER2P43116 358 aa29.26■■■□□ 2.27
TMEM50B-204ENST00000442441 SLC15A2Q16348 729 aa29.25■■■□□ 2.27
TMEM50B-204ENST00000442441 SIN3AQ96ST3 1273 aa29.25■■■□□ 2.27
TMEM50B-204ENST00000442441 ATF5Q9Y2D1 282 aaPredicted RBP29.25■■■□□ 2.27
TMEM50B-204ENST00000442441 TNS2Q63HR2 1409 aa29.25■■■□□ 2.27
TMEM50B-204ENST00000442441 MYOM1P52179 1685 aa29.24■■■□□ 2.27
TMEM50B-204ENST00000442441 MON2Q7Z3U7 1717 aa29.2■■■□□ 2.27
TMEM50B-204ENST00000442441 USP31Q70CQ4 1352 aa29.2■■■□□ 2.26
TMEM50B-204ENST00000442441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.19■■■□□ 2.26
TMEM50B-204ENST00000442441 NHSQ6T4R5 1651 aa29.18■■■□□ 2.26
TMEM50B-204ENST00000442441 NEUROD1Q13562 356 aa29.18■■■□□ 2.26
TMEM50B-204ENST00000442441 MTFR1LQ9H019 292 aa29.18■■■□□ 2.26
TMEM50B-204ENST00000442441 ERBB3P21860 1342 aa29.18■■■□□ 2.26
TMEM50B-204ENST00000442441 ACSBG1Q96GR2 724 aa29.17■■■□□ 2.26
TMEM50B-204ENST00000442441 NLRP2Q9NX02 1062 aa29.17■■■□□ 2.26
TMEM50B-204ENST00000442441 FHDC1Q9C0D6 1143 aaPredicted RBP29.16■■■□□ 2.26
TMEM50B-204ENST00000442441 USP54Q70EL1 1684 aa29.15■■■□□ 2.26
TMEM50B-204ENST00000442441 SBNO2Q9Y2G9 1366 aa29.15■■■□□ 2.26
TMEM50B-204ENST00000442441 NME9Q86XW9 330 aa29.15■■■□□ 2.26
TMEM50B-204ENST00000442441 SYT17Q9BSW7 474 aa29.15■■■□□ 2.26
TMEM50B-204ENST00000442441 IL2RBP14784 551 aa29.14■■■□□ 2.26
TMEM50B-204ENST00000442441 SGIP1Q9BQI5 828 aa29.14■■■□□ 2.26
TMEM50B-204ENST00000442441 UTRNP46939 3433 aa29.14■■■□□ 2.25
TMEM50B-204ENST00000442441 CD163L1Q9NR16 1453 aa29.12■■■□□ 2.25
TMEM50B-204ENST00000442441 LTN1O94822 1766 aa29.11■■■□□ 2.25
TMEM50B-204ENST00000442441 ANKRD24Q8TF21 1146 aa29.1■■■□□ 2.25
TMEM50B-204ENST00000442441 PAPPAQ13219 1627 aa29.09■■■□□ 2.25
TMEM50B-204ENST00000442441 TMC1Q8TDI8 760 aa29.09■■■□□ 2.25
TMEM50B-204ENST00000442441 HDGFL2Q7Z4V5 671 aaPredicted RBP29.08■■■□□ 2.25
TMEM50B-204ENST00000442441 BTAF1O14981 1849 aa29.08■■■□□ 2.25
TMEM50B-204ENST00000442441 ZNF784Q8NCA9 323 aaPredicted RBP29.07■■■□□ 2.24
TMEM50B-204ENST00000442441 ARXQ96QS3 562 aa29.07■■■□□ 2.24
TMEM50B-204ENST00000442441 SLC12A5Q9H2X9 1139 aa29.06■■■□□ 2.24
TMEM50B-204ENST00000442441 EDC4Q6P2E9 1401 aaKnown RBP29.05■■■□□ 2.24
TMEM50B-204ENST00000442441 KAT6BQ8WYB5 2073 aa29.05■■■□□ 2.24
TMEM50B-204ENST00000442441 CARD11Q9BXL7 1154 aa29.05■■■□□ 2.24
TMEM50B-204ENST00000442441 ZNF827Q17R98 1081 aa29.04■■■□□ 2.24
TMEM50B-204ENST00000442441 LRRC4BQ9NT99 713 aa29.03■■■□□ 2.24
TMEM50B-204ENST00000442441 TERF2IPQ9NYB0 399 aa29.02■■■□□ 2.24
TMEM50B-204ENST00000442441 MAP3K5Q99683 1374 aa29.01■■■□□ 2.24
TMEM50B-204ENST00000442441 CHD4Q14839 1912 aa28.99■■■□□ 2.23
TMEM50B-204ENST00000442441 IP6K1Q92551 441 aa28.99■■■□□ 2.23
TMEM50B-204ENST00000442441 A0A1W2PP64 1363 aa28.99■■■□□ 2.23
TMEM50B-204ENST00000442441 SLC27A3Q5K4L6 730 aa28.97■■■□□ 2.23
TMEM50B-204ENST00000442441 DDX54Q8TDD1 881 aaKnown RBP28.97■■■□□ 2.23
TMEM50B-204ENST00000442441 AKT1S1Q96B36 256 aa28.97■■■□□ 2.23
TMEM50B-204ENST00000442441 PUS7Q96PZ0 661 aaKnown RBP28.96■■■□□ 2.23
TMEM50B-204ENST00000442441 SLC16A10Q8TF71 515 aa28.95■■■□□ 2.22
TMEM50B-204ENST00000442441 LTV1Q96GA3 475 aaPredicted RBP28.94■■■□□ 2.22
TMEM50B-204ENST00000442441 FAM208AQ9UK61 1670 aaKnown RBP28.93■■■□□ 2.22
TMEM50B-204ENST00000442441 QSER1Q2KHR3 1735 aa28.91■■■□□ 2.22
TMEM50B-204ENST00000442441 POLD1P28340 1107 aa28.9■■■□□ 2.22
TMEM50B-204ENST00000442441 GPR162Q16538 588 aa28.9■■■□□ 2.22
TMEM50B-204ENST00000442441 PNPLA7Q6ZV29 1317 aa28.9■■■□□ 2.22
TMEM50B-204ENST00000442441 SYTL4Q96C24 671 aaPredicted RBP28.89■■■□□ 2.22
TMEM50B-204ENST00000442441 PRIM1P49642 420 aaKnown RBP28.88■■■□□ 2.21
TMEM50B-204ENST00000442441 TFCP2L1Q9NZI6 479 aa28.88■■■□□ 2.21
TMEM50B-204ENST00000442441 MAP3K19Q56UN5 1328 aa28.88■■■□□ 2.21
TMEM50B-204ENST00000442441 ANKRD36BQ8N2N9 1353 aa28.88■■■□□ 2.21
TMEM50B-204ENST00000442441 HOXC9P31274 260 aa28.87■■■□□ 2.21
TMEM50B-204ENST00000442441 COG3Q96JB2 828 aa28.87■■■□□ 2.21
TMEM50B-204ENST00000442441 COL24A1Q17RW2 1714 aa28.86■■■□□ 2.21
TMEM50B-204ENST00000442441 KCNQ4P56696 695 aa28.86■■■□□ 2.21
TMEM50B-204ENST00000442441 KLHL34Q8N239 644 aa28.86■■■□□ 2.21
TMEM50B-204ENST00000442441 DOT1LQ8TEK3 1739 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms