RNA–Protein interactions for RNA: ENST00000441560.6

ATL1-202, Transcript of atlastin GTPase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATL1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-202ENST00000441560 BANK1Q8NDB2 785 aa11.89□□□□□ -0.51
ATL1-202ENST00000441560 C16orf45Q96MC5 204 aaPredicted RBP11.89□□□□□ -0.51
ATL1-202ENST00000441560 GDPD2Q9HCC8 539 aa11.89□□□□□ -0.51
ATL1-202ENST00000441560 CUL7Q14999 1698 aa11.88□□□□□ -0.51
ATL1-202ENST00000441560 RAD51AP2Q09MP3 1159 aa11.88□□□□□ -0.51
ATL1-202ENST00000441560 GRIN2AQ12879 1464 aa11.88□□□□□ -0.51
ATL1-202ENST00000441560 CDC45O75419 566 aa11.88□□□□□ -0.51
ATL1-202ENST00000441560 TMEM57Q8N5G2 664 aa11.88□□□□□ -0.51
ATL1-202ENST00000441560 CC2D2AQ9P2K1 1620 aa11.87□□□□□ -0.51
ATL1-202ENST00000441560 PRDM15P57071 1507 aaPredicted RBP11.87□□□□□ -0.51
ATL1-202ENST00000441560 ST18O60284 1047 aa11.87□□□□□ -0.51
ATL1-202ENST00000441560 NOP2P46087 812 aaKnown RBP11.87□□□□□ -0.51
ATL1-202ENST00000441560 CNKSR2Q8WXI2 1034 aa11.87□□□□□ -0.51
ATL1-202ENST00000441560 ZBTB40Q9NUA8 1239 aa11.87□□□□□ -0.51
ATL1-202ENST00000441560 GADD45BO75293 160 aaPredicted RBP11.87□□□□□ -0.51
ATL1-202ENST00000441560 SYCP1Q15431 976 aa11.87□□□□□ -0.51
ATL1-202ENST00000441560 WDR63Q8IWG1 891 aa11.87□□□□□ -0.51
ATL1-202ENST00000441560 DHX16O60231 1041 aaKnown RBP11.86□□□□□ -0.51
ATL1-202ENST00000441560 KDM4AO75164 1064 aa11.86□□□□□ -0.51
ATL1-202ENST00000441560 ATF7IPQ6VMQ6 1270 aa11.86□□□□□ -0.51
ATL1-202ENST00000441560 TSR2Q969E8 191 aaKnown RBP11.86□□□□□ -0.51
ATL1-202ENST00000441560 RUNDC1Q96C34 613 aa11.86□□□□□ -0.51
ATL1-202ENST00000441560 SMTNL1A8MU46 457 aa11.86□□□□□ -0.51
ATL1-202ENST00000441560 CT47A1Q5JQC4 288 aaPredicted RBP11.86□□□□□ -0.51
ATL1-202ENST00000441560 CCDC112Q8NEF3 446 aa11.86□□□□□ -0.51
ATL1-202ENST00000441560 LAMC3Q9Y6N6 1575 aa11.85□□□□□ -0.51
ATL1-202ENST00000441560 KMT5BQ4FZB7 885 aa11.85□□□□□ -0.51
ATL1-202ENST00000441560 MYCBPQ99417 103 aaPredicted RBP11.85□□□□□ -0.51
ATL1-202ENST00000441560 PRDM2Q13029 1718 aa11.85□□□□□ -0.51
ATL1-202ENST00000441560 ANKRD36BQ8N2N9 1353 aa11.85□□□□□ -0.51
ATL1-202ENST00000441560 U2SURPO15042 1029 aaKnown RBP11.85□□□□□ -0.51
ATL1-202ENST00000441560 GPATCH11Q8N954 259 aa11.85□□□□□ -0.51
ATL1-202ENST00000441560 TOMM22Q9NS69 142 aa11.85□□□□□ -0.51
ATL1-202ENST00000441560 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.85□□□□□ -0.51
ATL1-202ENST00000441560 NOB1Q9ULX3 412 aaKnown RBP11.85□□□□□ -0.51
ATL1-202ENST00000441560 V9GYY5 206 aaPredicted RBP11.85□□□□□ -0.51
ATL1-202ENST00000441560 SMARCA5O60264 1052 aaPredicted RBP11.85□□□□□ -0.51
ATL1-202ENST00000441560 GYS2P54840 703 aa11.85□□□□□ -0.51
ATL1-202ENST00000441560 HOMEZQ8IX15 550 aa11.85□□□□□ -0.51
ATL1-202ENST00000441560 SSH1Q8WYL5 1049 aa11.85□□□□□ -0.51
ATL1-202ENST00000441560 CARD10Q9BWT7 1032 aa11.85□□□□□ -0.51
ATL1-202ENST00000441560 IFT57Q9NWB7 429 aa11.85□□□□□ -0.51
ATL1-202ENST00000441560 EIF4G3O43432 1585 aaKnown RBP11.84□□□□□ -0.51
ATL1-202ENST00000441560 ABCA10Q8WWZ4 1543 aa11.84□□□□□ -0.51
ATL1-202ENST00000441560 NOL10Q9BSC4 688 aaKnown RBP11.84□□□□□ -0.51
ATL1-202ENST00000441560 RASSF4Q9H2L5 321 aa11.84□□□□□ -0.51
ATL1-202ENST00000441560 TNNT1P13805 278 aa11.84□□□□□ -0.51
ATL1-202ENST00000441560 HSP90B1P14625 803 aaKnown RBP11.84□□□□□ -0.51
ATL1-202ENST00000441560 ZNF397Q8NF99 534 aaPredicted RBP11.84□□□□□ -0.51
ATL1-202ENST00000441560 ZNF592Q92610 1267 aa11.84□□□□□ -0.51
ATL1-202ENST00000441560 TULP1O00294 542 aaPredicted RBP11.83□□□□□ -0.52
ATL1-202ENST00000441560 CYP2C19P33261 490 aa11.83□□□□□ -0.52
ATL1-202ENST00000441560 NCAPGQ9BPX3 1015 aa11.83□□□□□ -0.52
ATL1-202ENST00000441560 GOLGA6L6A8MZA4 724 aa11.83□□□□□ -0.52
ATL1-202ENST00000441560 PTGS1P23219 599 aa11.83□□□□□ -0.52
ATL1-202ENST00000441560 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
ATL1-202ENST00000441560 RTF1Q92541 710 aaKnown RBP11.83□□□□□ -0.52
ATL1-202ENST00000441560 USP26Q9BXU7 913 aa11.83□□□□□ -0.52
ATL1-202ENST00000441560 AP5Z1O43299 807 aa11.82□□□□□ -0.52
ATL1-202ENST00000441560 TPM3P06753 285 aa11.82□□□□□ -0.52
ATL1-202ENST00000441560 RBM6P78332 1123 aaKnown RBP11.82□□□□□ -0.52
ATL1-202ENST00000441560 EXOSC9Q06265 439 aaKnown RBP11.82□□□□□ -0.52
ATL1-202ENST00000441560 USP48Q86UV5 1035 aa11.82□□□□□ -0.52
ATL1-202ENST00000441560 C1orf115Q9H7X2 142 aa11.82□□□□□ -0.52
ATL1-202ENST00000441560 CFAP74Q9C0B2 1584 aa11.82□□□□□ -0.52
ATL1-202ENST00000441560 HMGXB3Q12766 1538 aa11.82□□□□□ -0.52
ATL1-202ENST00000441560 BRPF1P55201 1214 aaPredicted RBP11.82□□□□□ -0.52
ATL1-202ENST00000441560 ICE2Q659A1 982 aa11.82□□□□□ -0.52
ATL1-202ENST00000441560 A2MP01023 1474 aa11.82□□□□□ -0.52
ATL1-202ENST00000441560 ADGBQ8N7X0 1667 aa11.82□□□□□ -0.52
ATL1-202ENST00000441560 ADGRL2O95490 1459 aa11.81□□□□□ -0.52
ATL1-202ENST00000441560 BRD1O95696 1058 aa11.81□□□□□ -0.52
ATL1-202ENST00000441560 PHF23Q9BUL5 403 aaPredicted RBP11.81□□□□□ -0.52
ATL1-202ENST00000441560 GSPT1P15170 499 aaKnown RBP11.81□□□□□ -0.52
ATL1-202ENST00000441560 CCDC183Q5T5S1 534 aa11.81□□□□□ -0.52
ATL1-202ENST00000441560 FBXO38Q6PIJ6 1188 aa11.81□□□□□ -0.52
ATL1-202ENST00000441560 C10orf67Q8IYJ2 551 aa11.81□□□□□ -0.52
ATL1-202ENST00000441560 CCDC141Q6ZP82 1450 aa11.81□□□□□ -0.52
ATL1-202ENST00000441560 TRHP20396 242 aaPredicted RBP11.81□□□□□ -0.52
ATL1-202ENST00000441560 LRMPQ12912 555 aa11.81□□□□□ -0.52
ATL1-202ENST00000441560 NOL8Q76FK4 1167 aaKnown RBP11.81□□□□□ -0.52
ATL1-202ENST00000441560 GTF3C6Q969F1 213 aa11.81□□□□□ -0.52
ATL1-202ENST00000441560 PAXBP1Q9Y5B6 917 aa11.81□□□□□ -0.52
ATL1-202ENST00000441560 ABCC10Q5T3U5 1492 aa11.8□□□□□ -0.52
ATL1-202ENST00000441560 NPHP1O15259 732 aa11.8□□□□□ -0.52
ATL1-202ENST00000441560 CEP83Q9Y592 693 aa11.8□□□□□ -0.52
ATL1-202ENST00000441560 TRIM66O15016 1216 aa11.8□□□□□ -0.52
ATL1-202ENST00000441560 GCC1Q96CN9 775 aa11.8□□□□□ -0.52
ATL1-202ENST00000441560 ZNF215Q9UL58 517 aaPredicted RBP11.8□□□□□ -0.52
ATL1-202ENST00000441560 NEK11Q8NG66 645 aa11.79□□□□□ -0.52
ATL1-202ENST00000441560 TMX3Q96JJ7 454 aa11.79□□□□□ -0.52
ATL1-202ENST00000441560 ITSN2Q9NZM3 1697 aa11.79□□□□□ -0.52
ATL1-202ENST00000441560 ELF2Q15723 593 aa11.79□□□□□ -0.52
ATL1-202ENST00000441560 TPD52L1Q16890 204 aaPredicted RBP11.79□□□□□ -0.52
ATL1-202ENST00000441560 CREBRFQ8IUR6 639 aa11.79□□□□□ -0.52
ATL1-202ENST00000441560 FAM53CQ9NYF3 392 aa11.79□□□□□ -0.52
ATL1-202ENST00000441560 POLA1P09884 1462 aaPredicted RBP11.78□□□□□ -0.52
ATL1-202ENST00000441560 MX1P20591 662 aa11.78□□□□□ -0.52
ATL1-202ENST00000441560 GIMAP6Q6P9H5 292 aa11.78□□□□□ -0.52
ATL1-202ENST00000441560 EGFL6Q8IUX8 553 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms