RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 ZBTB9Q96C00 473 aa9.18□□□□□ -0.94
HDAC9-214ENST00000441542 THUMPD2Q9BTF0 503 aaKnown RBP9.18□□□□□ -0.94
HDAC9-214ENST00000441542 TMEM51Q9NW97 253 aa9.18□□□□□ -0.94
HDAC9-214ENST00000441542 GPRASP1Q5JY77 1395 aa9.18□□□□□ -0.94
HDAC9-214ENST00000441542 ADAMTSL3P82987 1691 aa9.18□□□□□ -0.94
HDAC9-214ENST00000441542 AK9Q5TCS8 1911 aa9.17□□□□□ -0.94
HDAC9-214ENST00000441542 A2MP01023 1474 aa9.17□□□□□ -0.94
HDAC9-214ENST00000441542 CARMIL2Q6F5E8 1435 aa9.17□□□□□ -0.94
HDAC9-214ENST00000441542 RIOK3O14730 519 aaKnown RBP9.17□□□□□ -0.94
HDAC9-214ENST00000441542 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.17□□□□□ -0.94
HDAC9-214ENST00000441542 TRAK1Q9UPV9 953 aa9.17□□□□□ -0.94
HDAC9-214ENST00000441542 V9GYY5 206 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-214ENST00000441542 WDR7Q9Y4E6 1490 aa9.17□□□□□ -0.94
HDAC9-214ENST00000441542 GTPBP4Q9BZE4 634 aaKnown RBP9.17□□□□□ -0.94
HDAC9-214ENST00000441542 NCOA3Q9Y6Q9 1424 aa9.17□□□□□ -0.94
HDAC9-214ENST00000441542 NEK4P51957 841 aa9.16□□□□□ -0.94
HDAC9-214ENST00000441542 CCDC27Q2M243 656 aa9.16□□□□□ -0.94
HDAC9-214ENST00000441542 BMP2KLQ5H9B9 411 aa9.16□□□□□ -0.94
HDAC9-214ENST00000441542 LETM1O95202 739 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-214ENST00000441542 RABEP1Q15276 862 aa9.16□□□□□ -0.94
HDAC9-214ENST00000441542 ZBTB40Q9NUA8 1239 aa9.16□□□□□ -0.94
HDAC9-214ENST00000441542 ZDHHC9Q9Y397 364 aa9.16□□□□□ -0.94
HDAC9-214ENST00000441542 ST18O60284 1047 aa9.16□□□□□ -0.94
HDAC9-214ENST00000441542 TSHZ3Q63HK5 1081 aa9.16□□□□□ -0.94
HDAC9-214ENST00000441542 WDR63Q8IWG1 891 aa9.16□□□□□ -0.94
HDAC9-214ENST00000441542 ARHGEF12Q9NZN5 1544 aa9.15□□□□□ -0.94
HDAC9-214ENST00000441542 GPATCH8Q9UKJ3 1502 aaKnown RBP9.15□□□□□ -0.94
HDAC9-214ENST00000441542 HMGN5P82970 282 aaKnown RBP9.15□□□□□ -0.94
HDAC9-214ENST00000441542 E9PCH4 1651 aa9.15□□□□□ -0.94
HDAC9-214ENST00000441542 KIF20AO95235 890 aa9.15□□□□□ -0.94
HDAC9-214ENST00000441542 MCM5P33992 734 aa9.15□□□□□ -0.94
HDAC9-214ENST00000441542 NUTM2DQ5VT03 806 aaPredicted RBP9.15□□□□□ -0.94
HDAC9-214ENST00000441542 DRC7Q8IY82 874 aa9.15□□□□□ -0.94
HDAC9-214ENST00000441542 PYCARDQ9ULZ3 195 aa9.15□□□□□ -0.94
HDAC9-214ENST00000441542 GSPT1P15170 499 aaKnown RBP9.14□□□□□ -0.95
HDAC9-214ENST00000441542 C16orf45Q96MC5 204 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-214ENST00000441542 ASXL1Q8IXJ9 1541 aa9.14□□□□□ -0.95
HDAC9-214ENST00000441542 FAM135AQ9P2D6 1515 aa9.14□□□□□ -0.95
HDAC9-214ENST00000441542 IPO8O15397 1037 aaKnown RBP9.14□□□□□ -0.95
HDAC9-214ENST00000441542 PIK3C2GO75747 1445 aa9.14□□□□□ -0.95
HDAC9-214ENST00000441542 UPF3BQ9BZI7 483 aaKnown RBP9.14□□□□□ -0.95
HDAC9-214ENST00000441542 PIBF1Q8WXW3 757 aa9.14□□□□□ -0.95
HDAC9-214ENST00000441542 FIBPO43427 364 aa9.13□□□□□ -0.95
HDAC9-214ENST00000441542 CNPY4Q8N129 248 aa9.13□□□□□ -0.95
HDAC9-214ENST00000441542 PRIMPOLQ96LW4 560 aa9.13□□□□□ -0.95
HDAC9-214ENST00000441542 TROQ12816 1431 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-214ENST00000441542 GIMAP6Q6P9H5 292 aa9.12□□□□□ -0.95
HDAC9-214ENST00000441542 IFT57Q9NWB7 429 aa9.12□□□□□ -0.95
HDAC9-214ENST00000441542 NUP153P49790 1475 aaKnown RBP9.12□□□□□ -0.95
HDAC9-214ENST00000441542 PLB1Q6P1J6 1458 aa9.12□□□□□ -0.95
HDAC9-214ENST00000441542 FBLN1P23142 703 aa9.12□□□□□ -0.95
HDAC9-214ENST00000441542 GGNBP2Q9H3C7 697 aa9.12□□□□□ -0.95
HDAC9-214ENST00000441542 TMEM132EQ6IEE7 984 aa9.12□□□□□ -0.95
HDAC9-214ENST00000441542 SECISBP2LQ93073 1101 aaKnown RBP9.12□□□□□ -0.95
HDAC9-214ENST00000441542 SYAP1Q96A49 352 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-214ENST00000441542 NSD3Q9BZ95 1437 aa9.12□□□□□ -0.95
HDAC9-214ENST00000441542 KDM5DQ9BY66 1539 aa9.11□□□□□ -0.95
HDAC9-214ENST00000441542 MBD3O95983 291 aa9.11□□□□□ -0.95
HDAC9-214ENST00000441542 ADCY10Q96PN6 1610 aa9.11□□□□□ -0.95
HDAC9-214ENST00000441542 TMPOP42166 694 aaKnown RBP9.11□□□□□ -0.95
HDAC9-214ENST00000441542 USP48Q86UV5 1035 aa9.11□□□□□ -0.95
HDAC9-214ENST00000441542 IBTKQ9P2D0 1353 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-214ENST00000441542 NGEFQ8N5V2 710 aa9.1□□□□□ -0.95
HDAC9-214ENST00000441542 TMX3Q96JJ7 454 aa9.1□□□□□ -0.95
HDAC9-214ENST00000441542 USP26Q9BXU7 913 aa9.1□□□□□ -0.95
HDAC9-214ENST00000441542 ST7Q9NRC1 585 aa9.1□□□□□ -0.95
HDAC9-214ENST00000441542 CASC1Q6TDU7 716 aa9.1□□□□□ -0.95
HDAC9-214ENST00000441542 RTF1Q92541 710 aaKnown RBP9.1□□□□□ -0.95
HDAC9-214ENST00000441542 DIAPH3Q9NSV4 1193 aa9.1□□□□□ -0.95
HDAC9-214ENST00000441542 RNF216Q9NWF9 866 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-214ENST00000441542 PTGS1P23219 599 aa9.1□□□□□ -0.95
HDAC9-214ENST00000441542 IRX5P78411 483 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-214ENST00000441542 LRMPQ12912 555 aa9.1□□□□□ -0.95
HDAC9-214ENST00000441542 INTS3Q68E01 1043 aaKnown RBP9.1□□□□□ -0.95
HDAC9-214ENST00000441542 SIRT2Q8IXJ6 389 aa9.1□□□□□ -0.95
HDAC9-214ENST00000441542 TSPYL6Q8N831 410 aa9.1□□□□□ -0.95
HDAC9-214ENST00000441542 CNPY2Q9Y2B0 182 aa9.1□□□□□ -0.95
HDAC9-214ENST00000441542 IQGAP2Q13576 1575 aa9.1□□□□□ -0.95
HDAC9-214ENST00000441542 PLA2R1Q13018 1463 aa9.09□□□□□ -0.95
HDAC9-214ENST00000441542 CYP2E1P05181 493 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-214ENST00000441542 HMOX1P09601 288 aa9.09□□□□□ -0.95
HDAC9-214ENST00000441542 SDSP20132 328 aa9.09□□□□□ -0.95
HDAC9-214ENST00000441542 SRPK2P78362 688 aaKnown RBP9.09□□□□□ -0.95
HDAC9-214ENST00000441542 PLEKHM2Q8IWE5 1019 aa9.09□□□□□ -0.95
HDAC9-214ENST00000441542 PSMD1Q99460 953 aa9.09□□□□□ -0.95
HDAC9-214ENST00000441542 ANO2Q9NQ90 1003 aa9.09□□□□□ -0.95
HDAC9-214ENST00000441542 VIRMAQ69YN4 1812 aaKnown RBP9.09□□□□□ -0.95
HDAC9-214ENST00000441542 RILPL2Q969X0 211 aa9.09□□□□□ -0.95
HDAC9-214ENST00000441542 CWC22Q9HCG8 908 aaKnown RBP9.09□□□□□ -0.95
HDAC9-214ENST00000441542 TRIM6-TRIM34B2RNG4 842 aa9.09□□□□□ -0.96
HDAC9-214ENST00000441542 CAMK4Q16566 473 aa9.09□□□□□ -0.96
HDAC9-214ENST00000441542 TMED8Q6PL24 325 aaPredicted RBP9.09□□□□□ -0.96
HDAC9-214ENST00000441542 TRIM34Q9BYJ4 488 aa9.09□□□□□ -0.96
HDAC9-214ENST00000441542 FKBP5Q13451 457 aaPredicted RBP9.08□□□□□ -0.96
HDAC9-214ENST00000441542 GCC1Q96CN9 775 aa9.08□□□□□ -0.96
HDAC9-214ENST00000441542 TMX1Q9H3N1 280 aa9.08□□□□□ -0.96
HDAC9-214ENST00000441542 DDX54Q8TDD1 881 aaKnown RBP9.08□□□□□ -0.96
HDAC9-214ENST00000441542 TRIM35Q9UPQ4 493 aa9.08□□□□□ -0.96
HDAC9-214ENST00000441542 ABCC2Q92887 1545 aa9.08□□□□□ -0.96
HDAC9-214ENST00000441542 PHF14O94880 888 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms