RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 CCT4P50991 539 aaKnown RBP7.87□□□□□ -1.15
USP46-201ENST00000441222 SKIDA1Q1XH10 827 aa7.87□□□□□ -1.15
USP46-201ENST00000441222 AIMP1Q12904 312 aaKnown RBP7.87□□□□□ -1.15
USP46-201ENST00000441222 CNNM1Q9NRU3 951 aa7.87□□□□□ -1.15
USP46-201ENST00000441222 FMNL2Q96PY5 1086 aa7.87□□□□□ -1.15
USP46-201ENST00000441222 TDRD9Q8NDG6 1382 aaKnown RBP7.87□□□□□ -1.15
USP46-201ENST00000441222 CCDC148Q8NFR7 591 aa7.86□□□□□ -1.15
USP46-201ENST00000441222 WIZO95785 1651 aa7.86□□□□□ -1.15
USP46-201ENST00000441222 ME1P48163 572 aa7.86□□□□□ -1.15
USP46-201ENST00000441222 TANGO6Q9C0B7 1094 aa7.86□□□□□ -1.15
USP46-201ENST00000441222 FGFR1OPO95684 399 aaKnown RBP7.86□□□□□ -1.15
USP46-201ENST00000441222 PDE3AQ14432 1141 aa7.86□□□□□ -1.15
USP46-201ENST00000441222 TAX1BP1Q86VP1 789 aa7.86□□□□□ -1.15
USP46-201ENST00000441222 TAF4BQ92750 862 aa7.86□□□□□ -1.15
USP46-201ENST00000441222 GOLGA6L10A0A0M3HER8 536 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 STK11IPQ8N1F8 1099 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 RNF214Q8ND24 703 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 FAM107BQ9H098 131 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 NLRP2Q9NX02 1062 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 LRRFIP2Q9Y608 721 aaKnown RBP7.85□□□□□ -1.15
USP46-201ENST00000441222 EPB41L2O43491 1005 aaKnown RBP7.85□□□□□ -1.15
USP46-201ENST00000441222 KIAA1328Q86T90 577 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 TNIP1Q15025 636 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 VPS36Q86VN1 386 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 CEP57L1Q8IYX8 460 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 ATP2B1P20020 1258 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 CCDC97Q96F63 343 aaPredicted RBP7.85□□□□□ -1.15
USP46-201ENST00000441222 CENPHQ9H3R5 247 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 ANAPC15P60006 121 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 PTPRGP23470 1445 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 ZSCAN31Q96LW9 406 aaPredicted RBP7.85□□□□□ -1.15
USP46-201ENST00000441222 ZHX3Q9H4I2 956 aa7.85□□□□□ -1.15
USP46-201ENST00000441222 MPHOSPH10O00566 681 aaKnown RBP7.84□□□□□ -1.15
USP46-201ENST00000441222 MTMR7Q9Y216 660 aa7.84□□□□□ -1.15
USP46-201ENST00000441222 FIBPO43427 364 aa7.84□□□□□ -1.15
USP46-201ENST00000441222 NF2P35240 595 aa7.84□□□□□ -1.15
USP46-201ENST00000441222 CRACR2AQ9BSW2 395 aa7.84□□□□□ -1.15
USP46-201ENST00000441222 CIZ1Q9ULV3 898 aaPredicted RBP7.84□□□□□ -1.15
USP46-201ENST00000441222 ATP2B2Q01814 1243 aa7.84□□□□□ -1.15
USP46-201ENST00000441222 SF3B2Q13435 895 aaKnown RBP7.84□□□□□ -1.15
USP46-201ENST00000441222 PRPF40AO75400 957 aaKnown RBP7.84□□□□□ -1.15
USP46-201ENST00000441222 MAP2K1Q02750 393 aaPredicted RBP7.84□□□□□ -1.15
USP46-201ENST00000441222 DNAJC2Q99543 621 aaKnown RBP7.84□□□□□ -1.15
USP46-201ENST00000441222 MPHOSPH8Q99549 860 aa7.84□□□□□ -1.15
USP46-201ENST00000441222 HMOX1P09601 288 aa7.84□□□□□ -1.15
USP46-201ENST00000441222 WDHD1O75717 1129 aaPredicted RBP7.84□□□□□ -1.16
USP46-201ENST00000441222 KLHL34Q8N239 644 aa7.84□□□□□ -1.16
USP46-201ENST00000441222 ZNF428Q96B54 188 aa7.83□□□□□ -1.16
USP46-201ENST00000441222 LARP1BQ659C4 914 aaKnown RBP7.83□□□□□ -1.16
USP46-201ENST00000441222 BLOC1S2Q6QNY1 142 aa7.83□□□□□ -1.16
USP46-201ENST00000441222 SPC24Q8NBT2 197 aa7.83□□□□□ -1.16
USP46-201ENST00000441222 GCOM1H8Y6P7 765 aaPredicted RBP7.83□□□□□ -1.16
USP46-201ENST00000441222 MYZAPP0CAP1 466 aa7.83□□□□□ -1.16
USP46-201ENST00000441222 TATP17735 454 aaPredicted RBP7.83□□□□□ -1.16
USP46-201ENST00000441222 MATR3P43243 847 aaKnown RBP eCLIP7.83□□□□□ -1.16
USP46-201ENST00000441222 UBAC1Q9BSL1 405 aa7.83□□□□□ -1.16
USP46-201ENST00000441222 TAOK3Q9H2K8 898 aa7.83□□□□□ -1.16
USP46-201ENST00000441222 SHTN1A0MZ66 631 aa7.83□□□□□ -1.16
USP46-201ENST00000441222 ANKRD18BA2A2Z9 1011 aa7.83□□□□□ -1.16
USP46-201ENST00000441222 NLRP6P59044 892 aa7.83□□□□□ -1.16
USP46-201ENST00000441222 GRIPAP1Q4V328 841 aa7.83□□□□□ -1.16
USP46-201ENST00000441222 CCDC150Q8NCX0 1101 aa7.83□□□□□ -1.16
USP46-201ENST00000441222 ARHGAP29Q52LW3 1261 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 PPP4R3AQ6IN85 833 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 PPP6R1Q9UPN7 881 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 EIF5P55010 431 aaKnown RBP7.82□□□□□ -1.16
USP46-201ENST00000441222 CCDC83Q8IWF9 413 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 ABTB2Q8N961 1025 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 DDX11Q96FC9 970 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 RAB34Q9BZG1 259 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 ZNF76P36508 570 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 MICALCLQ6ZW33 695 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 CECR2Q9BXF3 1484 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 CCDC196A0A1B0GTZ2 297 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 K7ELQ4 463 aaPredicted RBP7.82□□□□□ -1.16
USP46-201ENST00000441222 ZSCAN12O43309 604 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 SPA17Q15506 151 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 UBXN4Q92575 508 aa7.82□□□□□ -1.16
USP46-201ENST00000441222 ZNF692Q9BU19 519 aaPredicted RBP7.82□□□□□ -1.16
USP46-201ENST00000441222 PHF23Q9BUL5 403 aaPredicted RBP7.82□□□□□ -1.16
USP46-201ENST00000441222 PHAXQ9H814 394 aaKnown RBP7.82□□□□□ -1.16
USP46-201ENST00000441222 HOOK3Q86VS8 718 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 SPATA24Q86W54 205 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 UPF3BQ9BZI7 483 aaKnown RBP7.81□□□□□ -1.16
USP46-201ENST00000441222 SEPT11Q9NVA2 429 aaKnown RBP7.81□□□□□ -1.16
USP46-201ENST00000441222 PANK1Q8TE04 598 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 DDX12PQ92771 950 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 KIF20AO95235 890 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 SPATA32Q96LK8 384 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 TSG101Q99816 390 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 NUP62CLQ9H1M0 184 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 GIGYF2Q6Y7W6 1299 aaKnown RBP7.81□□□□□ -1.16
USP46-201ENST00000441222 FERMT1Q9BQL6 677 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 SPG7Q9UQ90 795 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 KIF21BO75037 1637 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 MROH2BQ7Z745 1585 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 CEBPZQ03701 1054 aaKnown RBP7.81□□□□□ -1.16
USP46-201ENST00000441222 HDGFL1Q5TGJ6 251 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 TMOD2Q9NZR1 351 aa7.81□□□□□ -1.16
USP46-201ENST00000441222 TDO2P48775 406 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms