RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 TMC2Q8TDI7 906 aa6.92□□□□□ -1.3
CCDC140-202ENST00000440903 KCTD12Q96CX2 325 aaKnown RBP6.92□□□□□ -1.3
CCDC140-202ENST00000440903 BCL11BQ9C0K0 894 aaPredicted RBP6.92□□□□□ -1.3
CCDC140-202ENST00000440903 TAOK2Q9UL54 1235 aa6.92□□□□□ -1.3
CCDC140-202ENST00000440903 EVC2Q86UK5 1308 aa6.92□□□□□ -1.3
CCDC140-202ENST00000440903 TMEM94Q12767 1356 aa6.92□□□□□ -1.3
CCDC140-202ENST00000440903 IQSEC2Q5JU85 1478 aa6.92□□□□□ -1.3
CCDC140-202ENST00000440903 PSDA5PKW4 1024 aaPredicted RBP6.91□□□□□ -1.3
CCDC140-202ENST00000440903 KIF3CO14782 793 aa6.91□□□□□ -1.3
CCDC140-202ENST00000440903 HSPA5P11021 654 aaKnown RBP6.91□□□□□ -1.3
CCDC140-202ENST00000440903 ATF3P18847 181 aa6.91□□□□□ -1.3
CCDC140-202ENST00000440903 SRPK2P78362 688 aaKnown RBP6.91□□□□□ -1.3
CCDC140-202ENST00000440903 FBXO22Q8NEZ5 403 aa6.91□□□□□ -1.3
CCDC140-202ENST00000440903 STK24Q9Y6E0 443 aa6.91□□□□□ -1.3
CCDC140-202ENST00000440903 MINK1Q8N4C8 1332 aaPredicted RBP6.91□□□□□ -1.3
CCDC140-202ENST00000440903 LRRC7Q96NW7 1537 aa6.91□□□□□ -1.3
CCDC140-202ENST00000440903 NALCNQ8IZF0 1738 aa6.9□□□□□ -1.3
CCDC140-202ENST00000440903 ST20-MTHFSA0A0A6YYL1 179 aa6.9□□□□□ -1.3
CCDC140-202ENST00000440903 SLC34A2O95436 690 aa6.9□□□□□ -1.3
CCDC140-202ENST00000440903 CADPS2Q86UW7 1296 aa6.9□□□□□ -1.3
CCDC140-202ENST00000440903 ATAD2Q6PL18 1390 aa6.9□□□□□ -1.31
CCDC140-202ENST00000440903 ANKARQ7Z5J8 1434 aa6.9□□□□□ -1.31
CCDC140-202ENST00000440903 TULP4Q9NRJ4 1543 aa6.9□□□□□ -1.31
CCDC140-202ENST00000440903 ITSN1Q15811 1721 aa6.9□□□□□ -1.31
CCDC140-202ENST00000440903 TK2O00142 265 aa6.89□□□□□ -1.31
CCDC140-202ENST00000440903 WAPLQ7Z5K2 1190 aa6.89□□□□□ -1.31
CCDC140-202ENST00000440903 POLR3GLQ9BT43 218 aa6.89□□□□□ -1.31
CCDC140-202ENST00000440903 C19orf44Q9H6X5 657 aa6.89□□□□□ -1.31
CCDC140-202ENST00000440903 PLEKHH1Q9ULM0 1364 aa6.89□□□□□ -1.31
CCDC140-202ENST00000440903 NINLQ9Y2I6 1382 aa6.89□□□□□ -1.31
CCDC140-202ENST00000440903 LTBP4Q8N2S1 1624 aa6.89□□□□□ -1.31
CCDC140-202ENST00000440903 STRCP1A6NGW2 1772 aa6.88□□□□□ -1.31
CCDC140-202ENST00000440903 FMN2Q9NZ56 1722 aa6.88□□□□□ -1.31
CCDC140-202ENST00000440903 HIRIP3Q9BW71 556 aaPredicted RBP6.88□□□□□ -1.31
CCDC140-202ENST00000440903 KIF1AQ12756 1690 aa6.87□□□□□ -1.31
CCDC140-202ENST00000440903 WASLO00401 505 aaPredicted RBP6.87□□□□□ -1.31
CCDC140-202ENST00000440903 PSEN2P49810 448 aa6.87□□□□□ -1.31
CCDC140-202ENST00000440903 MFRPQ9BY79 579 aa6.87□□□□□ -1.31
CCDC140-202ENST00000440903 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.87□□□□□ -1.31
CCDC140-202ENST00000440903 ATP7BP35670 1465 aa6.86□□□□□ -1.31
CCDC140-202ENST00000440903 TOM1O60784 492 aa6.86□□□□□ -1.31
CCDC140-202ENST00000440903 PTPN5P54829 565 aa6.86□□□□□ -1.31
CCDC140-202ENST00000440903 DMRTA1Q5VZB9 504 aa6.86□□□□□ -1.31
CCDC140-202ENST00000440903 PUS7Q96PZ0 661 aaKnown RBP6.86□□□□□ -1.31
CCDC140-202ENST00000440903 IRX2Q9BZI1 471 aaPredicted RBP6.86□□□□□ -1.31
CCDC140-202ENST00000440903 PPIP5K1Q6PFW1 1433 aa6.85□□□□□ -1.31
CCDC140-202ENST00000440903 DISP3Q9P2K9 1392 aa6.85□□□□□ -1.31
CCDC140-202ENST00000440903 STK25O00506 426 aa6.85□□□□□ -1.31
CCDC140-202ENST00000440903 HRO43593 1189 aa6.85□□□□□ -1.31
CCDC140-202ENST00000440903 HDGFL2Q7Z4V5 671 aaPredicted RBP6.85□□□□□ -1.31
CCDC140-202ENST00000440903 TMC1Q8TDI8 760 aa6.85□□□□□ -1.31
CCDC140-202ENST00000440903 RBM33Q96EV2 1170 aaKnown RBP6.85□□□□□ -1.31
CCDC140-202ENST00000440903 TESK2Q96S53 571 aa6.85□□□□□ -1.31
CCDC140-202ENST00000440903 CDK19Q9BWU1 502 aa6.85□□□□□ -1.31
CCDC140-202ENST00000440903 TERF2IPQ9NYB0 399 aa6.85□□□□□ -1.31
CCDC140-202ENST00000440903 MST1RQ04912 1400 aa6.84□□□□□ -1.31
CCDC140-202ENST00000440903 CCDC7Q96M83 1385 aa6.84□□□□□ -1.31
CCDC140-202ENST00000440903 TOPAZ1Q8N9V7 1692 aa6.84□□□□□ -1.31
CCDC140-202ENST00000440903 PPP4R3BQ5MIZ7 849 aa6.84□□□□□ -1.31
CCDC140-202ENST00000440903 CERKQ8TCT0 537 aa6.84□□□□□ -1.31
CCDC140-202ENST00000440903 C1orf167Q5SNV9 1468 aa6.84□□□□□ -1.31
CCDC140-202ENST00000440903 XIRP1Q702N8 1843 aaKnown RBP6.83□□□□□ -1.32
CCDC140-202ENST00000440903 KIF7Q2M1P5 1343 aa6.83□□□□□ -1.32
CCDC140-202ENST00000440903 NUTM2FA1L443 756 aa6.83□□□□□ -1.32
CCDC140-202ENST00000440903 UBAP1LF5GYI3 381 aa6.83□□□□□ -1.32
CCDC140-202ENST00000440903 ESCO1Q5FWF5 840 aa6.83□□□□□ -1.32
CCDC140-202ENST00000440903 NGDNQ8NEJ9 315 aaKnown RBP6.83□□□□□ -1.32
CCDC140-202ENST00000440903 NUDT16Q96DE0 195 aaKnown RBP6.83□□□□□ -1.32
CCDC140-202ENST00000440903 BRD4O60885 1362 aaPredicted RBP6.82□□□□□ -1.32
CCDC140-202ENST00000440903 ANKRD36BQ8N2N9 1353 aa6.82□□□□□ -1.32
CCDC140-202ENST00000440903 NPHP3Q7Z494 1330 aa6.82□□□□□ -1.32
CCDC140-202ENST00000440903 WASHC2AQ641Q2 1341 aa6.81□□□□□ -1.32
CCDC140-202ENST00000440903 MYOM1P52179 1685 aa6.81□□□□□ -1.32
CCDC140-202ENST00000440903 USP32Q8NFA0 1604 aa6.81□□□□□ -1.32
CCDC140-202ENST00000440903 RGS20O76081 388 aa6.81□□□□□ -1.32
CCDC140-202ENST00000440903 PSME1Q06323 249 aa6.81□□□□□ -1.32
CCDC140-202ENST00000440903 KCNK17Q96T54 332 aa6.81□□□□□ -1.32
CCDC140-202ENST00000440903 SLAIN2Q9P270 581 aa6.81□□□□□ -1.32
CCDC140-202ENST00000440903 KTN1Q86UP2 1357 aaKnown RBP6.81□□□□□ -1.32
CCDC140-202ENST00000440903 ROBO1Q9Y6N7 1651 aa6.81□□□□□ -1.32
CCDC140-202ENST00000440903 PRR36Q9H6K5 1346 aa6.8□□□□□ -1.32
CCDC140-202ENST00000440903 PIP4K2BP78356 416 aa6.8□□□□□ -1.32
CCDC140-202ENST00000440903 EDC4Q6P2E9 1401 aaKnown RBP6.8□□□□□ -1.32
CCDC140-202ENST00000440903 CABP1Q9NZU7 370 aa6.8□□□□□ -1.32
CCDC140-202ENST00000440903 A0A1W2PP64 1363 aa6.8□□□□□ -1.32
CCDC140-202ENST00000440903 NSD2O96028 1365 aa6.8□□□□□ -1.32
CCDC140-202ENST00000440903 AHDC1Q5TGY3 1603 aaPredicted RBP6.79□□□□□ -1.32
CCDC140-202ENST00000440903 MON2Q7Z3U7 1717 aa6.79□□□□□ -1.32
CCDC140-202ENST00000440903 USP6P35125 1406 aa6.79□□□□□ -1.32
CCDC140-202ENST00000440903 NSD3Q9BZ95 1437 aa6.79□□□□□ -1.32
CCDC140-202ENST00000440903 PLEKHG3A1L390 1219 aa6.79□□□□□ -1.32
CCDC140-202ENST00000440903 PMFBP1Q8TBY8 1022 aa6.79□□□□□ -1.32
CCDC140-202ENST00000440903 KNSTRNQ9Y448 316 aa6.79□□□□□ -1.32
CCDC140-202ENST00000440903 POLR3AO14802 1390 aaPredicted RBP6.79□□□□□ -1.32
CCDC140-202ENST00000440903 ARHGEF10O15013 1369 aa6.79□□□□□ -1.32
CCDC140-202ENST00000440903 NHSL1Q5SYE7 1610 aa6.79□□□□□ -1.32
CCDC140-202ENST00000440903 ACEP12821 1306 aa6.78□□□□□ -1.32
CCDC140-202ENST00000440903 CGNL1Q0VF96 1302 aa6.78□□□□□ -1.32
CCDC140-202ENST00000440903 TTC21AQ8NDW8 1320 aa6.78□□□□□ -1.32
CCDC140-202ENST00000440903 TNS3Q68CZ2 1445 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms