RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 CARD10Q9BWT7 1032 aa16.49■□□□□ 0.23
UBE2D4-204ENST00000440899 PARP4Q9UKK3 1724 aaKnown RBP16.49■□□□□ 0.23
UBE2D4-204ENST00000440899 COL18A1P39060 1754 aa16.49■□□□□ 0.23
UBE2D4-204ENST00000440899 OVOS2A0A0G2JMS6 1433 aa16.48■□□□□ 0.23
UBE2D4-204ENST00000440899 OVOS2A0A0J9YW53 1432 aa16.48■□□□□ 0.23
UBE2D4-204ENST00000440899 OVOS2Q6IE36 1432 aa16.48■□□□□ 0.23
UBE2D4-204ENST00000440899 CSB-PGBD3P0DP91 1061 aa16.48■□□□□ 0.23
UBE2D4-204ENST00000440899 NBPF14Q5TI25 921 aa16.48■□□□□ 0.23
UBE2D4-204ENST00000440899 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.48■□□□□ 0.23
UBE2D4-204ENST00000440899 TMC1Q8TDI8 760 aa16.48■□□□□ 0.23
UBE2D4-204ENST00000440899 AKAP12Q02952 1782 aa16.48■□□□□ 0.23
UBE2D4-204ENST00000440899 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
UBE2D4-204ENST00000440899 PUS7Q96PZ0 661 aaKnown RBP16.47■□□□□ 0.23
UBE2D4-204ENST00000440899 SLC12A5Q9H2X9 1139 aa16.46■□□□□ 0.23
UBE2D4-204ENST00000440899 USP31Q70CQ4 1352 aa16.46■□□□□ 0.23
UBE2D4-204ENST00000440899 NFAT5O94916 1531 aa16.45■□□□□ 0.22
UBE2D4-204ENST00000440899 TERF2IPQ9NYB0 399 aa16.45■□□□□ 0.22
UBE2D4-204ENST00000440899 PLSCR1O15162 318 aa16.44■□□□□ 0.22
UBE2D4-204ENST00000440899 NME9Q86XW9 330 aa16.44■□□□□ 0.22
UBE2D4-204ENST00000440899 MARCH10Q8NA82 808 aaPredicted RBP16.44■□□□□ 0.22
UBE2D4-204ENST00000440899 BCL11BQ9C0K0 894 aaPredicted RBP16.44■□□□□ 0.22
UBE2D4-204ENST00000440899 CD163L1Q9NR16 1453 aa16.43■□□□□ 0.22
UBE2D4-204ENST00000440899 CCDC7Q96M83 1385 aa16.43■□□□□ 0.22
UBE2D4-204ENST00000440899 EXOC5O00471 708 aa16.43■□□□□ 0.22
UBE2D4-204ENST00000440899 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
UBE2D4-204ENST00000440899 LRRC37A3O60309 1634 aa16.42■□□□□ 0.22
UBE2D4-204ENST00000440899 ABCC6O95255 1503 aa16.42■□□□□ 0.22
UBE2D4-204ENST00000440899 RREB1Q92766 1687 aa16.42■□□□□ 0.22
UBE2D4-204ENST00000440899 BCL9O00512 1426 aa16.42■□□□□ 0.22
UBE2D4-204ENST00000440899 EDC4Q6P2E9 1401 aaKnown RBP16.42■□□□□ 0.22
UBE2D4-204ENST00000440899 MON2Q7Z3U7 1717 aa16.42■□□□□ 0.22
UBE2D4-204ENST00000440899 PEAK1Q9H792 1746 aa16.42■□□□□ 0.22
UBE2D4-204ENST00000440899 TESK2Q96S53 571 aa16.4■□□□□ 0.22
UBE2D4-204ENST00000440899 ERBB3P21860 1342 aa16.4■□□□□ 0.22
UBE2D4-204ENST00000440899 RGPD5Q99666 1765 aa16.39■□□□□ 0.21
UBE2D4-204ENST00000440899 ST20-MTHFSA0A0A6YYL1 179 aa16.39■□□□□ 0.21
UBE2D4-204ENST00000440899 TRIM26Q12899 539 aaPredicted RBP16.39■□□□□ 0.21
UBE2D4-204ENST00000440899 PTF1AQ7RTS3 328 aa16.39■□□□□ 0.21
UBE2D4-204ENST00000440899 NLRP2Q9NX02 1062 aa16.39■□□□□ 0.21
UBE2D4-204ENST00000440899 NUP188Q5SRE5 1749 aa16.39■□□□□ 0.21
UBE2D4-204ENST00000440899 A0A1W2PP64 1363 aa16.38■□□□□ 0.21
UBE2D4-204ENST00000440899 NINLQ9Y2I6 1382 aa16.38■□□□□ 0.21
UBE2D4-204ENST00000440899 USP54Q70EL1 1684 aa16.37■□□□□ 0.21
UBE2D4-204ENST00000440899 ANKRD24Q8TF21 1146 aa16.37■□□□□ 0.21
UBE2D4-204ENST00000440899 SBF2Q86WG5 1849 aa16.36■□□□□ 0.21
UBE2D4-204ENST00000440899 PROM2Q8N271 834 aa16.36■□□□□ 0.21
UBE2D4-204ENST00000440899 SPON1Q9HCB6 807 aa16.36■□□□□ 0.21
UBE2D4-204ENST00000440899 TNS2Q63HR2 1409 aa16.36■□□□□ 0.21
UBE2D4-204ENST00000440899 WNK3Q9BYP7 1800 aa16.35■□□□□ 0.21
UBE2D4-204ENST00000440899 KCNQ2O43526 872 aa16.35■□□□□ 0.21
UBE2D4-204ENST00000440899 IL2RBP14784 551 aa16.35■□□□□ 0.21
UBE2D4-204ENST00000440899 IP6K1Q92551 441 aa16.35■□□□□ 0.21
UBE2D4-204ENST00000440899 RGPD3A6NKT7 1758 aaPredicted RBP16.34■□□□□ 0.21
UBE2D4-204ENST00000440899 RGPD4Q7Z3J3 1758 aa16.34■□□□□ 0.21
UBE2D4-204ENST00000440899 COG3Q96JB2 828 aa16.34■□□□□ 0.21
UBE2D4-204ENST00000440899 TXNRD1Q16881 649 aa16.33■□□□□ 0.2
UBE2D4-204ENST00000440899 ANO8Q9HCE9 1232 aaPredicted RBP16.33■□□□□ 0.2
UBE2D4-204ENST00000440899 PPP1R1BQ9UD71 204 aaPredicted RBP16.33■□□□□ 0.2
UBE2D4-204ENST00000440899 TMF1P82094 1093 aa16.31■□□□□ 0.2
UBE2D4-204ENST00000440899 ACSBG1Q96GR2 724 aa16.31■□□□□ 0.2
UBE2D4-204ENST00000440899 LTN1O94822 1766 aa16.31■□□□□ 0.2
UBE2D4-204ENST00000440899 ANKRD36BQ8N2N9 1353 aa16.29■□□□□ 0.2
UBE2D4-204ENST00000440899 AMPHP49418 695 aa16.29■□□□□ 0.2
UBE2D4-204ENST00000440899 LTV1Q96GA3 475 aaPredicted RBP16.29■□□□□ 0.2
UBE2D4-204ENST00000440899 STK32BQ9NY57 414 aa16.29■□□□□ 0.2
UBE2D4-204ENST00000440899 USP47Q96K76 1375 aa16.28■□□□□ 0.2
UBE2D4-204ENST00000440899 MAP3K19Q56UN5 1328 aa16.28■□□□□ 0.2
UBE2D4-204ENST00000440899 SLC15A2Q16348 729 aa16.28■□□□□ 0.2
UBE2D4-204ENST00000440899 HOXC9P31274 260 aa16.27■□□□□ 0.2
UBE2D4-204ENST00000440899 CDCA8Q53HL2 280 aa16.27■□□□□ 0.2
UBE2D4-204ENST00000440899 FYB1O15117 783 aa16.26■□□□□ 0.19
UBE2D4-204ENST00000440899 FBLN1P23142 703 aa16.26■□□□□ 0.19
UBE2D4-204ENST00000440899 DDX54Q8TDD1 881 aaKnown RBP16.26■□□□□ 0.19
UBE2D4-204ENST00000440899 PDGFDQ9GZP0 370 aaPredicted RBP16.26■□□□□ 0.19
UBE2D4-204ENST00000440899 NHSQ6T4R5 1651 aa16.24■□□□□ 0.19
UBE2D4-204ENST00000440899 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
UBE2D4-204ENST00000440899 ZBTB7AO95365 584 aa16.24■□□□□ 0.19
UBE2D4-204ENST00000440899 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
UBE2D4-204ENST00000440899 GGNBP2Q9H3C7 697 aa16.23■□□□□ 0.19
UBE2D4-204ENST00000440899 RTL1A6NKG5 1358 aa16.23■□□□□ 0.19
UBE2D4-204ENST00000440899 RRS1Q15050 365 aaKnown RBP16.22■□□□□ 0.19
UBE2D4-204ENST00000440899 ZCRB1Q8TBF4 217 aaKnown RBP16.22■□□□□ 0.19
UBE2D4-204ENST00000440899 ATF5Q9Y2D1 282 aaPredicted RBP16.22■□□□□ 0.19
UBE2D4-204ENST00000440899 CASZ1Q86V15 1759 aa16.22■□□□□ 0.19
UBE2D4-204ENST00000440899 FAM208AQ9UK61 1670 aaKnown RBP16.21■□□□□ 0.19
UBE2D4-204ENST00000440899 PTGER2P43116 358 aa16.21■□□□□ 0.19
UBE2D4-204ENST00000440899 MTFR1LQ9H019 292 aa16.21■□□□□ 0.19
UBE2D4-204ENST00000440899 KAT6BQ8WYB5 2073 aa16.2■□□□□ 0.18
UBE2D4-204ENST00000440899 PRIM1P49642 420 aaKnown RBP16.19■□□□□ 0.18
UBE2D4-204ENST00000440899 SLC27A3Q5K4L6 730 aa16.19■□□□□ 0.18
UBE2D4-204ENST00000440899 NBPF6Q5VWK0 638 aa16.19■□□□□ 0.18
UBE2D4-204ENST00000440899 NBPF4Q96M43 638 aa16.19■□□□□ 0.18
UBE2D4-204ENST00000440899 LRRC4BQ9NT99 713 aa16.19■□□□□ 0.18
UBE2D4-204ENST00000440899 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
UBE2D4-204ENST00000440899 CLSPNQ9HAW4 1339 aa16.19■□□□□ 0.18
UBE2D4-204ENST00000440899 BTAF1O14981 1849 aa16.18■□□□□ 0.18
UBE2D4-204ENST00000440899 SYTL4Q96C24 671 aaPredicted RBP16.18■□□□□ 0.18
UBE2D4-204ENST00000440899 SMG6Q86US8 1419 aaKnown RBP16.18■□□□□ 0.18
UBE2D4-204ENST00000440899 YY1P25490 414 aa16.17■□□□□ 0.18
UBE2D4-204ENST00000440899 RAPGEF4Q8WZA2 1011 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms