RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 USP19O94966 1318 aa25.14■■□□□ 1.62
SNX17-203ENST00000440760 ZBTB7CA1YPR0 619 aa25.14■■□□□ 1.61
SNX17-203ENST00000440760 FCHSD2O94868 740 aa25.14■■□□□ 1.61
SNX17-203ENST00000440760 HOXC9P31274 260 aa25.14■■□□□ 1.61
SNX17-203ENST00000440760 PHRF1Q9P1Y6 1649 aaKnown RBP25.13■■□□□ 1.61
SNX17-203ENST00000440760 AEBP1Q8IUX7 1158 aa25.13■■□□□ 1.61
SNX17-203ENST00000440760 WWC1Q8IX03 1113 aa25.13■■□□□ 1.61
SNX17-203ENST00000440760 GOLGA2Q08379 1002 aa25.12■■□□□ 1.61
SNX17-203ENST00000440760 SPINK5Q9NQ38 1064 aaPredicted RBP25.12■■□□□ 1.61
SNX17-203ENST00000440760 GCP02774 474 aa25.11■■□□□ 1.61
SNX17-203ENST00000440760 KCNH5Q8NCM2 988 aa25.11■■□□□ 1.61
SNX17-203ENST00000440760 CRYBG1Q9Y4K1 1723 aa25.1■■□□□ 1.61
SNX17-203ENST00000440760 RTL1A6NKG5 1358 aa25.1■■□□□ 1.61
SNX17-203ENST00000440760 KIF24Q5T7B8 1368 aa25.1■■□□□ 1.61
SNX17-203ENST00000440760 TMPOP42166 694 aaKnown RBP25.09■■□□□ 1.61
SNX17-203ENST00000440760 NGEFQ8N5V2 710 aa25.09■■□□□ 1.61
SNX17-203ENST00000440760 PHACTR3Q96KR7 559 aa25.09■■□□□ 1.61
SNX17-203ENST00000440760 NHSL1Q5SYE7 1610 aa25.09■■□□□ 1.61
SNX17-203ENST00000440760 SULT6B1Q6IMI4 303 aa25.09■■□□□ 1.61
SNX17-203ENST00000440760 PHF23Q9BUL5 403 aaPredicted RBP25.09■■□□□ 1.61
SNX17-203ENST00000440760 SPATA31A3Q5VYP0 1347 aa25.08■■□□□ 1.61
SNX17-203ENST00000440760 LTV1Q96GA3 475 aaPredicted RBP25.07■■□□□ 1.6
SNX17-203ENST00000440760 PNNQ9H307 717 aaKnown RBP25.07■■□□□ 1.6
SNX17-203ENST00000440760 DUSP27Q5VZP5 1158 aa25.07■■□□□ 1.6
SNX17-203ENST00000440760 ARHGEF10O15013 1369 aa25.06■■□□□ 1.6
SNX17-203ENST00000440760 SLFN5Q08AF3 891 aa25.06■■□□□ 1.6
SNX17-203ENST00000440760 CABLES1Q8TDN4 633 aa25.06■■□□□ 1.6
SNX17-203ENST00000440760 DLG5Q8TDM6 1919 aa25.05■■□□□ 1.6
SNX17-203ENST00000440760 IRX6P78412 446 aaPredicted RBP25.05■■□□□ 1.6
SNX17-203ENST00000440760 FKBP8Q14318 412 aa25.05■■□□□ 1.6
SNX17-203ENST00000440760 ROBO1Q9Y6N7 1651 aa25.05■■□□□ 1.6
SNX17-203ENST00000440760 CCDC27Q2M243 656 aa25.04■■□□□ 1.6
SNX17-203ENST00000440760 ARHGEF25Q86VW2 580 aa25.04■■□□□ 1.6
SNX17-203ENST00000440760 IP6K1Q92551 441 aa25.04■■□□□ 1.6
SNX17-203ENST00000440760 EYA1Q99502 592 aa25.04■■□□□ 1.6
SNX17-203ENST00000440760 SOS2Q07890 1332 aaPredicted RBP25.04■■□□□ 1.6
SNX17-203ENST00000440760 RGPD2P0DJD1 1756 aa25.04■■□□□ 1.6
SNX17-203ENST00000440760 RGPD5Q99666 1765 aa25.04■■□□□ 1.6
SNX17-203ENST00000440760 RIPK4P57078 832 aa25.04■■□□□ 1.6
SNX17-203ENST00000440760 TRIM35Q9UPQ4 493 aa25.04■■□□□ 1.6
SNX17-203ENST00000440760 NEFLP07196 543 aa25.03■■□□□ 1.6
SNX17-203ENST00000440760 NEFMP07197 916 aa25.03■■□□□ 1.6
SNX17-203ENST00000440760 IGSF1Q8N6C5 1336 aa25.03■■□□□ 1.6
SNX17-203ENST00000440760 ZC3H6P61129 1189 aaKnown RBP25.02■■□□□ 1.6
SNX17-203ENST00000440760 E9PSI1 815 aa25.01■■□□□ 1.59
SNX17-203ENST00000440760 TRMT2AQ8IZ69 625 aaKnown RBP25■■□□□ 1.59
SNX17-203ENST00000440760 NFE2L2Q16236 605 aa25■■□□□ 1.59
SNX17-203ENST00000440760 ABCA3Q99758 1704 aa24.99■■□□□ 1.59
SNX17-203ENST00000440760 KDRP35968 1356 aa24.99■■□□□ 1.59
SNX17-203ENST00000440760 RCAN3Q9UKA8 241 aa24.99■■□□□ 1.59
SNX17-203ENST00000440760 NCBP3Q53F19 620 aaKnown RBP24.98■■□□□ 1.59
SNX17-203ENST00000440760 USHBP1Q8N6Y0 703 aa24.98■■□□□ 1.59
SNX17-203ENST00000440760 WDR63Q8IWG1 891 aa24.98■■□□□ 1.59
SNX17-203ENST00000440760 AXIN2Q9Y2T1 843 aa24.96■■□□□ 1.59
SNX17-203ENST00000440760 COL18A1P39060 1754 aa24.95■■□□□ 1.59
SNX17-203ENST00000440760 AEBP2Q6ZN18 517 aaPredicted RBP24.94■■□□□ 1.58
SNX17-203ENST00000440760 LRRC59Q96AG4 307 aaKnown RBP24.94■■□□□ 1.58
SNX17-203ENST00000440760 THUMPD2Q9BTF0 503 aaKnown RBP24.94■■□□□ 1.58
SNX17-203ENST00000440760 RNF123Q5XPI4 1314 aa24.93■■□□□ 1.58
SNX17-203ENST00000440760 NBPF6Q5VWK0 638 aa24.93■■□□□ 1.58
SNX17-203ENST00000440760 NBPF4Q96M43 638 aa24.93■■□□□ 1.58
SNX17-203ENST00000440760 KIAA0232Q92628 1395 aa24.92■■□□□ 1.58
SNX17-203ENST00000440760 CHRNA2Q15822 529 aa24.92■■□□□ 1.58
SNX17-203ENST00000440760 ANKRD24Q8TF21 1146 aa24.92■■□□□ 1.58
SNX17-203ENST00000440760 AHDC1Q5TGY3 1603 aaPredicted RBP24.92■■□□□ 1.58
SNX17-203ENST00000440760 FAM83GA6ND36 823 aa24.91■■□□□ 1.58
SNX17-203ENST00000440760 TSR2Q969E8 191 aaKnown RBP24.91■■□□□ 1.58
SNX17-203ENST00000440760 CAMTA1Q9Y6Y1 1673 aa24.9■■□□□ 1.58
SNX17-203ENST00000440760 DCTN1Q14203 1278 aa24.89■■□□□ 1.57
SNX17-203ENST00000440760 RRP1P56182 461 aaKnown RBP24.88■■□□□ 1.57
SNX17-203ENST00000440760 FANCIQ9NVI1 1328 aa24.88■■□□□ 1.57
SNX17-203ENST00000440760 MTHFSDQ2M296 383 aaKnown RBP24.87■■□□□ 1.57
SNX17-203ENST00000440760 MYH16Q9H6N6 1097 aa24.87■■□□□ 1.57
SNX17-203ENST00000440760 ERBB3P21860 1342 aa24.87■■□□□ 1.57
SNX17-203ENST00000440760 CPDO75976 1380 aa24.87■■□□□ 1.57
SNX17-203ENST00000440760 LMO7Q8WWI1 1683 aa24.86■■□□□ 1.57
SNX17-203ENST00000440760 IL16Q14005 1332 aa24.85■■□□□ 1.57
SNX17-203ENST00000440760 HAP1P54257 671 aaPredicted RBP24.85■■□□□ 1.57
SNX17-203ENST00000440760 ABCC6O95255 1503 aa24.85■■□□□ 1.57
SNX17-203ENST00000440760 PHLPP1O60346 1717 aa24.85■■□□□ 1.57
SNX17-203ENST00000440760 LMOD3Q0VAK6 560 aa24.84■■□□□ 1.57
SNX17-203ENST00000440760 NCAPD2Q15021 1401 aa24.84■■□□□ 1.57
SNX17-203ENST00000440760 LAS1LQ9Y4W2 734 aaKnown RBP24.84■■□□□ 1.57
SNX17-203ENST00000440760 PLIN1O60240 522 aa24.83■■□□□ 1.57
SNX17-203ENST00000440760 PIP4K2BP78356 416 aa24.83■■□□□ 1.57
SNX17-203ENST00000440760 MCM10Q7L590 875 aa24.82■■□□□ 1.56
SNX17-203ENST00000440760 FAM208AQ9UK61 1670 aaKnown RBP24.82■■□□□ 1.56
SNX17-203ENST00000440760 PRDM11Q9NQV5 511 aa24.82■■□□□ 1.56
SNX17-203ENST00000440760 COL16A1Q07092 1604 aaPredicted RBP24.81■■□□□ 1.56
SNX17-203ENST00000440760 GAS2L2Q8NHY3 880 aa24.8■■□□□ 1.56
SNX17-203ENST00000440760 EXOSC9Q06265 439 aaKnown RBP24.78■■□□□ 1.56
SNX17-203ENST00000440760 COL22A1Q8NFW1 1626 aaPredicted RBP24.78■■□□□ 1.56
SNX17-203ENST00000440760 BCAR3O75815 825 aa24.78■■□□□ 1.56
SNX17-203ENST00000440760 CSB-PGBD3P0DP91 1061 aa24.78■■□□□ 1.56
SNX17-203ENST00000440760 NLRP2Q9NX02 1062 aa24.78■■□□□ 1.56
SNX17-203ENST00000440760 TOM1O60784 492 aa24.77■■□□□ 1.56
SNX17-203ENST00000440760 CALD1Q05682 793 aaKnown RBP24.77■■□□□ 1.56
SNX17-203ENST00000440760 LRRC37A3O60309 1634 aa24.77■■□□□ 1.56
SNX17-203ENST00000440760 IFT57Q9NWB7 429 aa24.76■■□□□ 1.55
SNX17-203ENST00000440760 UBAP1LF5GYI3 381 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms