RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 NINLQ9Y2I6 1382 aa20.44■□□□□ 0.86
PTPRN-205ENST00000440552 ZBTB7CA1YPR0 619 aa20.43■□□□□ 0.86
PTPRN-205ENST00000440552 ZNF692Q9BU19 519 aaPredicted RBP20.43■□□□□ 0.86
PTPRN-205ENST00000440552 ARHGEF25Q86VW2 580 aa20.42■□□□□ 0.86
PTPRN-205ENST00000440552 KCNH5Q8NCM2 988 aa20.42■□□□□ 0.86
PTPRN-205ENST00000440552 PPP1R1BQ9UD71 204 aaPredicted RBP20.42■□□□□ 0.86
PTPRN-205ENST00000440552 AXIN2Q9Y2T1 843 aa20.42■□□□□ 0.86
PTPRN-205ENST00000440552 CPSF1Q10570 1443 aaKnown RBP20.42■□□□□ 0.86
PTPRN-205ENST00000440552 WNK3Q9BYP7 1800 aa20.41■□□□□ 0.86
PTPRN-205ENST00000440552 TRPM1Q7Z4N2 1603 aa20.41■□□□□ 0.86
PTPRN-205ENST00000440552 TTC21BQ7Z4L5 1316 aa20.4■□□□□ 0.86
PTPRN-205ENST00000440552 MARCH10Q8NA82 808 aaPredicted RBP20.4■□□□□ 0.86
PTPRN-205ENST00000440552 L3MBTL2Q969R5 705 aa20.4■□□□□ 0.86
PTPRN-205ENST00000440552 CARD10Q9BWT7 1032 aa20.4■□□□□ 0.86
PTPRN-205ENST00000440552 TTC21AQ8NDW8 1320 aa20.39■□□□□ 0.85
PTPRN-205ENST00000440552 YY1P25490 414 aa20.39■□□□□ 0.85
PTPRN-205ENST00000440552 ANO8Q9HCE9 1232 aaPredicted RBP20.38■□□□□ 0.85
PTPRN-205ENST00000440552 AKAP12Q02952 1782 aa20.37■□□□□ 0.85
PTPRN-205ENST00000440552 CASZ1Q86V15 1759 aa20.37■□□□□ 0.85
PTPRN-205ENST00000440552 DCAF8L1A6NGE4 600 aa20.37■□□□□ 0.85
PTPRN-205ENST00000440552 PTF1AQ7RTS3 328 aa20.37■□□□□ 0.85
PTPRN-205ENST00000440552 PROM2Q8N271 834 aa20.37■□□□□ 0.85
PTPRN-205ENST00000440552 ABCC6O95255 1503 aa20.37■□□□□ 0.85
PTPRN-205ENST00000440552 NFAT5O94916 1531 aa20.35■□□□□ 0.85
PTPRN-205ENST00000440552 CCDC7Q96M83 1385 aa20.34■□□□□ 0.85
PTPRN-205ENST00000440552 RGPD5Q99666 1765 aa20.34■□□□□ 0.85
PTPRN-205ENST00000440552 EXOC5O00471 708 aa20.33■□□□□ 0.85
PTPRN-205ENST00000440552 CSB-PGBD3P0DP91 1061 aa20.33■□□□□ 0.85
PTPRN-205ENST00000440552 ROCK2O75116 1388 aaKnown RBP20.32■□□□□ 0.84
PTPRN-205ENST00000440552 TXNRD1Q16881 649 aa20.31■□□□□ 0.84
PTPRN-205ENST00000440552 KTN1Q86UP2 1357 aaKnown RBP20.31■□□□□ 0.84
PTPRN-205ENST00000440552 TNS2Q63HR2 1409 aa20.3■□□□□ 0.84
PTPRN-205ENST00000440552 USP31Q70CQ4 1352 aa20.3■□□□□ 0.84
PTPRN-205ENST00000440552 SOX12O15370 315 aa20.29■□□□□ 0.84
PTPRN-205ENST00000440552 PDGFDQ9GZP0 370 aaPredicted RBP20.29■□□□□ 0.84
PTPRN-205ENST00000440552 STK32BQ9NY57 414 aa20.29■□□□□ 0.84
PTPRN-205ENST00000440552 SBNO2Q9Y2G9 1366 aa20.29■□□□□ 0.84
PTPRN-205ENST00000440552 MON2Q7Z3U7 1717 aa20.28■□□□□ 0.84
PTPRN-205ENST00000440552 PTGER2P43116 358 aa20.28■□□□□ 0.84
PTPRN-205ENST00000440552 SLC15A2Q16348 729 aa20.28■□□□□ 0.84
PTPRN-205ENST00000440552 USP54Q70EL1 1684 aa20.27■□□□□ 0.84
PTPRN-205ENST00000440552 ZBTB7AO95365 584 aa20.27■□□□□ 0.84
PTPRN-205ENST00000440552 SIN3AQ96ST3 1273 aa20.26■□□□□ 0.83
PTPRN-205ENST00000440552 ERBB3P21860 1342 aa20.26■□□□□ 0.83
PTPRN-205ENST00000440552 NHSQ6T4R5 1651 aa20.25■□□□□ 0.83
PTPRN-205ENST00000440552 MYOM1P52179 1685 aa20.24■□□□□ 0.83
PTPRN-205ENST00000440552 MTFR1LQ9H019 292 aa20.23■□□□□ 0.83
PTPRN-205ENST00000440552 ATF5Q9Y2D1 282 aaPredicted RBP20.23■□□□□ 0.83
PTPRN-205ENST00000440552 SGIP1Q9BQI5 828 aa20.22■□□□□ 0.83
PTPRN-205ENST00000440552 CD163L1Q9NR16 1453 aa20.22■□□□□ 0.83
PTPRN-205ENST00000440552 IL2RBP14784 551 aa20.21■□□□□ 0.83
PTPRN-205ENST00000440552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.21■□□□□ 0.83
PTPRN-205ENST00000440552 NLRP2Q9NX02 1062 aa20.21■□□□□ 0.83
PTPRN-205ENST00000440552 NEUROD1Q13562 356 aa20.2■□□□□ 0.82
PTPRN-205ENST00000440552 NME9Q86XW9 330 aa20.2■□□□□ 0.82
PTPRN-205ENST00000440552 SYT17Q9BSW7 474 aa20.2■□□□□ 0.82
PTPRN-205ENST00000440552 PAPPAQ13219 1627 aa20.19■□□□□ 0.82
PTPRN-205ENST00000440552 LTN1O94822 1766 aa20.18■□□□□ 0.82
PTPRN-205ENST00000440552 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
PTPRN-205ENST00000440552 ACSBG1Q96GR2 724 aa20.18■□□□□ 0.82
PTPRN-205ENST00000440552 FHDC1Q9C0D6 1143 aaPredicted RBP20.18■□□□□ 0.82
PTPRN-205ENST00000440552 EDC4Q6P2E9 1401 aaKnown RBP20.18■□□□□ 0.82
PTPRN-205ENST00000440552 ANKRD24Q8TF21 1146 aa20.17■□□□□ 0.82
PTPRN-205ENST00000440552 PUS7Q96PZ0 661 aaKnown RBP20.17■□□□□ 0.82
PTPRN-205ENST00000440552 KAT6BQ8WYB5 2073 aa20.17■□□□□ 0.82
PTPRN-205ENST00000440552 BTAF1O14981 1849 aa20.16■□□□□ 0.82
PTPRN-205ENST00000440552 MAP3K5Q99683 1374 aa20.16■□□□□ 0.82
PTPRN-205ENST00000440552 TMC1Q8TDI8 760 aa20.15■□□□□ 0.82
PTPRN-205ENST00000440552 CARD11Q9BXL7 1154 aa20.15■□□□□ 0.82
PTPRN-205ENST00000440552 ARXQ96QS3 562 aa20.14■□□□□ 0.81
PTPRN-205ENST00000440552 SLC12A5Q9H2X9 1139 aa20.14■□□□□ 0.81
PTPRN-205ENST00000440552 TERF2IPQ9NYB0 399 aa20.14■□□□□ 0.81
PTPRN-205ENST00000440552 ZNF784Q8NCA9 323 aaPredicted RBP20.13■□□□□ 0.81
PTPRN-205ENST00000440552 CHD4Q14839 1912 aa20.12■□□□□ 0.81
PTPRN-205ENST00000440552 IP6K1Q92551 441 aa20.12■□□□□ 0.81
PTPRN-205ENST00000440552 UTRNP46939 3433 aa20.11■□□□□ 0.81
PTPRN-205ENST00000440552 A0A1W2PP64 1363 aa20.11■□□□□ 0.81
PTPRN-205ENST00000440552 ZNF827Q17R98 1081 aa20.11■□□□□ 0.81
PTPRN-205ENST00000440552 SLC27A3Q5K4L6 730 aa20.11■□□□□ 0.81
PTPRN-205ENST00000440552 LRRC4BQ9NT99 713 aa20.11■□□□□ 0.81
PTPRN-205ENST00000440552 FAM208AQ9UK61 1670 aaKnown RBP20.1■□□□□ 0.81
PTPRN-205ENST00000440552 SLC16A10Q8TF71 515 aa20.1■□□□□ 0.81
PTPRN-205ENST00000440552 AKT1S1Q96B36 256 aa20.1■□□□□ 0.81
PTPRN-205ENST00000440552 QSER1Q2KHR3 1735 aa20.09■□□□□ 0.81
PTPRN-205ENST00000440552 COL24A1Q17RW2 1714 aa20.06■□□□□ 0.8
PTPRN-205ENST00000440552 DDX54Q8TDD1 881 aaKnown RBP20.06■□□□□ 0.8
PTPRN-205ENST00000440552 SLC24A1O60721 1099 aa20.04■□□□□ 0.8
PTPRN-205ENST00000440552 ANKRD36BQ8N2N9 1353 aa20.04■□□□□ 0.8
PTPRN-205ENST00000440552 LTV1Q96GA3 475 aaPredicted RBP20.03■□□□□ 0.8
PTPRN-205ENST00000440552 COG3Q96JB2 828 aa20.03■□□□□ 0.8
PTPRN-205ENST00000440552 MAP3K19Q56UN5 1328 aa20.02■□□□□ 0.8
PTPRN-205ENST00000440552 PNPLA7Q6ZV29 1317 aa20.02■□□□□ 0.8
PTPRN-205ENST00000440552 POLD1P28340 1107 aa20.02■□□□□ 0.8
PTPRN-205ENST00000440552 HOXC9P31274 260 aa20.02■□□□□ 0.8
PTPRN-205ENST00000440552 TESK2Q96S53 571 aa20.02■□□□□ 0.8
PTPRN-205ENST00000440552 PRIM1P49642 420 aaKnown RBP20.01■□□□□ 0.79
PTPRN-205ENST00000440552 NSD2O96028 1365 aa20■□□□□ 0.79
PTPRN-205ENST00000440552 TONSLQ96HA7 1378 aa20■□□□□ 0.79
PTPRN-205ENST00000440552 LY75O60449 1722 aa20■□□□□ 0.79
PTPRN-205ENST00000440552 ZCRB1Q8TBF4 217 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms