RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 RWDD1Q9H446 243 aaPredicted RBP5.73□□□□□ -1.49
SCN3A-204ENST00000440431 AMOTL2Q9Y2J4 779 aa5.73□□□□□ -1.49
SCN3A-204ENST00000440431 PLEKHG3A1L390 1219 aa5.73□□□□□ -1.49
SCN3A-204ENST00000440431 EDC4Q6P2E9 1401 aaKnown RBP5.73□□□□□ -1.49
SCN3A-204ENST00000440431 ANO8Q9HCE9 1232 aaPredicted RBP5.73□□□□□ -1.49
SCN3A-204ENST00000440431 NPHP4O75161 1426 aaPredicted RBP5.72□□□□□ -1.49
SCN3A-204ENST00000440431 USP6P35125 1406 aa5.72□□□□□ -1.49
SCN3A-204ENST00000440431 HSP90B1P14625 803 aaKnown RBP5.72□□□□□ -1.49
SCN3A-204ENST00000440431 WWC1Q8IX03 1113 aa5.72□□□□□ -1.49
SCN3A-204ENST00000440431 GPATCH3Q96I76 525 aa5.72□□□□□ -1.49
SCN3A-204ENST00000440431 TTC5Q8N0Z6 440 aa5.72□□□□□ -1.49
SCN3A-204ENST00000440431 USP31Q70CQ4 1352 aa5.72□□□□□ -1.49
SCN3A-204ENST00000440431 NFAT5O94916 1531 aa5.72□□□□□ -1.49
SCN3A-204ENST00000440431 PMFBP1Q8TBY8 1022 aa5.72□□□□□ -1.49
SCN3A-204ENST00000440431 NUDT16Q96DE0 195 aaKnown RBP5.72□□□□□ -1.49
SCN3A-204ENST00000440431 CDCA7LQ96GN5 454 aa5.72□□□□□ -1.49
SCN3A-204ENST00000440431 MST1RQ04912 1400 aa5.71□□□□□ -1.49
SCN3A-204ENST00000440431 LTN1O94822 1766 aa5.71□□□□□ -1.49
SCN3A-204ENST00000440431 DDX58O95786 925 aaKnown RBP5.71□□□□□ -1.5
SCN3A-204ENST00000440431 GTF2E1P29083 439 aaPredicted RBP5.71□□□□□ -1.5
SCN3A-204ENST00000440431 KCNJ4P48050 445 aa5.71□□□□□ -1.5
SCN3A-204ENST00000440431 RGPD2P0DJD1 1756 aa5.71□□□□□ -1.5
SCN3A-204ENST00000440431 CAMTA1Q9Y6Y1 1673 aa5.71□□□□□ -1.5
SCN3A-204ENST00000440431 NUTM2FA1L443 756 aa5.71□□□□□ -1.5
SCN3A-204ENST00000440431 TAF7LQ5H9L4 462 aa5.71□□□□□ -1.5
SCN3A-204ENST00000440431 COL18A1P39060 1754 aa5.71□□□□□ -1.5
SCN3A-204ENST00000440431 ANKARQ7Z5J8 1434 aa5.71□□□□□ -1.5
SCN3A-204ENST00000440431 E9PSI1 815 aa5.71□□□□□ -1.5
SCN3A-204ENST00000440431 NEXNQ0ZGT2 675 aa5.71□□□□□ -1.5
SCN3A-204ENST00000440431 LRRFIP1Q32MZ4 808 aaKnown RBP5.71□□□□□ -1.5
SCN3A-204ENST00000440431 CHMP4CQ96CF2 233 aa5.71□□□□□ -1.5
SCN3A-204ENST00000440431 LTV1Q96GA3 475 aaPredicted RBP5.71□□□□□ -1.5
SCN3A-204ENST00000440431 AATKQ6ZMQ8 1374 aa5.7□□□□□ -1.5
SCN3A-204ENST00000440431 LMO7Q8WWI1 1683 aa5.7□□□□□ -1.5
SCN3A-204ENST00000440431 NLRP6P59044 892 aa5.7□□□□□ -1.5
SCN3A-204ENST00000440431 FGD1P98174 961 aa5.7□□□□□ -1.5
SCN3A-204ENST00000440431 AAMPQ13685 434 aa5.7□□□□□ -1.5
SCN3A-204ENST00000440431 ADGRL3Q9HAR2 1447 aa5.7□□□□□ -1.5
SCN3A-204ENST00000440431 CDK11BP21127 795 aaKnown RBP5.7□□□□□ -1.5
SCN3A-204ENST00000440431 POLKQ9UBT6 870 aa5.7□□□□□ -1.5
SCN3A-204ENST00000440431 RCAN3Q9UKA8 241 aa5.7□□□□□ -1.5
SCN3A-204ENST00000440431 KIAA1211Q6ZU35 1233 aa5.7□□□□□ -1.5
SCN3A-204ENST00000440431 GAS2L2Q8NHY3 880 aa5.7□□□□□ -1.5
SCN3A-204ENST00000440431 GGNBP2Q9H3C7 697 aa5.7□□□□□ -1.5
SCN3A-204ENST00000440431 CDK12Q9NYV4 1490 aaPredicted RBP5.7□□□□□ -1.5
SCN3A-204ENST00000440431 MTHFSP49914 203 aa5.69□□□□□ -1.5
SCN3A-204ENST00000440431 NME9Q86XW9 330 aa5.69□□□□□ -1.5
SCN3A-204ENST00000440431 MED1Q15648 1581 aaPredicted RBP5.69□□□□□ -1.5
SCN3A-204ENST00000440431 RGPD5Q99666 1765 aa5.69□□□□□ -1.5
SCN3A-204ENST00000440431 GNAI1P63096 354 aa5.69□□□□□ -1.5
SCN3A-204ENST00000440431 ZRSR1Q15695 479 aaKnown RBP5.69□□□□□ -1.5
SCN3A-204ENST00000440431 PLEKHO1Q53GL0 409 aaPredicted RBP5.69□□□□□ -1.5
SCN3A-204ENST00000440431 GORABQ5T7V8 394 aa5.69□□□□□ -1.5
SCN3A-204ENST00000440431 SMC4Q9NTJ3 1288 aa5.69□□□□□ -1.5
SCN3A-204ENST00000440431 CCDC61Q9Y6R9 512 aa5.69□□□□□ -1.5
SCN3A-204ENST00000440431 SLIT3O75094 1523 aa5.69□□□□□ -1.5
SCN3A-204ENST00000440431 G3V3G9 751 aa5.69□□□□□ -1.5
SCN3A-204ENST00000440431 DCAF8Q5TAQ9 597 aa5.69□□□□□ -1.5
SCN3A-204ENST00000440431 API5Q9BZZ5 524 aaKnown RBP5.69□□□□□ -1.5
SCN3A-204ENST00000440431 ACEP12821 1306 aa5.69□□□□□ -1.5
SCN3A-204ENST00000440431 DUSP27Q5VZP5 1158 aa5.68□□□□□ -1.5
SCN3A-204ENST00000440431 KCNH5Q8NCM2 988 aa5.68□□□□□ -1.5
SCN3A-204ENST00000440431 RUNDC1Q96C34 613 aa5.68□□□□□ -1.5
SCN3A-204ENST00000440431 RBM33Q96EV2 1170 aaKnown RBP5.68□□□□□ -1.5
SCN3A-204ENST00000440431 LRRC37A3O60309 1634 aa5.68□□□□□ -1.5
SCN3A-204ENST00000440431 ABCA3Q99758 1704 aa5.68□□□□□ -1.5
SCN3A-204ENST00000440431 VIRMAQ69YN4 1812 aaKnown RBP5.68□□□□□ -1.5
SCN3A-204ENST00000440431 HSP90AB1P08238 724 aaKnown RBP5.68□□□□□ -1.5
SCN3A-204ENST00000440431 ESCO1Q5FWF5 840 aa5.68□□□□□ -1.5
SCN3A-204ENST00000440431 DCAF8L1A6NGE4 600 aa5.68□□□□□ -1.5
SCN3A-204ENST00000440431 ABTB2Q8N961 1025 aa5.68□□□□□ -1.5
SCN3A-204ENST00000440431 ZNF330Q9Y3S2 320 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-204ENST00000440431 TTC21BQ7Z4L5 1316 aa5.67□□□□□ -1.5
SCN3A-204ENST00000440431 IL13P35225 146 aa5.67□□□□□ -1.5
SCN3A-204ENST00000440431 TATP17735 454 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-204ENST00000440431 NLRP2Q9NX02 1062 aa5.67□□□□□ -1.5
SCN3A-204ENST00000440431 KIF1AQ12756 1690 aa5.67□□□□□ -1.5
SCN3A-204ENST00000440431 NCAPD2Q15021 1401 aa5.67□□□□□ -1.5
SCN3A-204ENST00000440431 TRIM35Q9UPQ4 493 aa5.67□□□□□ -1.5
SCN3A-204ENST00000440431 FAM208AQ9UK61 1670 aaKnown RBP5.67□□□□□ -1.5
SCN3A-204ENST00000440431 ADAMTS7Q9UKP4 1686 aa5.66□□□□□ -1.5
SCN3A-204ENST00000440431 HSP90AB4PQ58FF6 505 aa5.66□□□□□ -1.5
SCN3A-204ENST00000440431 PXDNQ92626 1479 aa5.66□□□□□ -1.5
SCN3A-204ENST00000440431 SF3B2Q13435 895 aaKnown RBP5.66□□□□□ -1.5
SCN3A-204ENST00000440431 CADPS2Q86UW7 1296 aa5.66□□□□□ -1.5
SCN3A-204ENST00000440431 ITPRIPQ8IWB1 547 aa5.66□□□□□ -1.5
SCN3A-204ENST00000440431 CCDC146Q8IYE0 955 aa5.66□□□□□ -1.5
SCN3A-204ENST00000440431 UBE2Q2Q8WVN8 375 aa5.66□□□□□ -1.5
SCN3A-204ENST00000440431 RBM19Q9Y4C8 960 aaKnown RBP5.66□□□□□ -1.5
SCN3A-204ENST00000440431 SLFN5Q08AF3 891 aa5.66□□□□□ -1.5
SCN3A-204ENST00000440431 ZKSCAN2Q63HK3 967 aa5.66□□□□□ -1.5
SCN3A-204ENST00000440431 EMILIN1Q9Y6C2 1016 aa5.66□□□□□ -1.5
SCN3A-204ENST00000440431 C1orf167Q5SNV9 1468 aa5.66□□□□□ -1.5
SCN3A-204ENST00000440431 NCBP3Q53F19 620 aaKnown RBP5.65□□□□□ -1.5
SCN3A-204ENST00000440431 RSPH6AQ9H0K4 717 aa5.65□□□□□ -1.5
SCN3A-204ENST00000440431 SPG7Q9UQ90 795 aa5.65□□□□□ -1.5
SCN3A-204ENST00000440431 NHSL1Q5SYE7 1610 aa5.65□□□□□ -1.5
SCN3A-204ENST00000440431 SIPA1L3O60292 1781 aaPredicted RBP5.65□□□□□ -1.51
SCN3A-204ENST00000440431 LTBP4Q8N2S1 1624 aa5.65□□□□□ -1.51
SCN3A-204ENST00000440431 KIF16BQ96L93 1317 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms