RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 PHLPP1O60346 1717 aa13.37□□□□□ -0.27
LSMEM1-202ENST00000439068 ZNF710Q8N1W2 664 aa13.37□□□□□ -0.27
LSMEM1-202ENST00000439068 ANKRD50Q9ULJ7 1429 aa13.37□□□□□ -0.27
LSMEM1-202ENST00000439068 NUTM2BA6NNL0 878 aaPredicted RBP13.36□□□□□ -0.27
LSMEM1-202ENST00000439068 NUTM2EB1AL46 878 aaPredicted RBP13.36□□□□□ -0.27
LSMEM1-202ENST00000439068 RIMBP2O15034 1052 aa13.36□□□□□ -0.27
LSMEM1-202ENST00000439068 NUTM2AQ8IVF1 878 aaPredicted RBP13.36□□□□□ -0.27
LSMEM1-202ENST00000439068 LHX6Q9UPM6 363 aa13.36□□□□□ -0.27
LSMEM1-202ENST00000439068 AMOTL2Q9Y2J4 779 aa13.36□□□□□ -0.27
LSMEM1-202ENST00000439068 NWD1Q149M9 1564 aa13.36□□□□□ -0.27
LSMEM1-202ENST00000439068 CROCC2H7BZ55 1655 aa13.35□□□□□ -0.27
LSMEM1-202ENST00000439068 NUTM2DQ5VT03 806 aaPredicted RBP13.35□□□□□ -0.27
LSMEM1-202ENST00000439068 PHOX2BQ99453 314 aa13.35□□□□□ -0.27
LSMEM1-202ENST00000439068 REPIN1Q9BWE0 567 aaKnown RBP13.35□□□□□ -0.27
LSMEM1-202ENST00000439068 ZFYVE9O95405 1425 aa13.35□□□□□ -0.27
LSMEM1-202ENST00000439068 TTLL12Q14166 644 aaPredicted RBP13.34□□□□□ -0.27
LSMEM1-202ENST00000439068 LRRC59Q96AG4 307 aaKnown RBP13.34□□□□□ -0.27
LSMEM1-202ENST00000439068 ZSWIM6Q9HCJ5 1215 aa13.34□□□□□ -0.27
LSMEM1-202ENST00000439068 ADGRL2O95490 1459 aa13.32□□□□□ -0.28
LSMEM1-202ENST00000439068 PLEKHG3A1L390 1219 aa13.32□□□□□ -0.28
LSMEM1-202ENST00000439068 PADI6Q6TGC4 694 aa13.32□□□□□ -0.28
LSMEM1-202ENST00000439068 BRINP3Q76B58 766 aa13.32□□□□□ -0.28
LSMEM1-202ENST00000439068 NLRP7Q8WX94 980 aa13.31□□□□□ -0.28
LSMEM1-202ENST00000439068 CHD2O14647 1828 aaKnown RBP13.31□□□□□ -0.28
LSMEM1-202ENST00000439068 ZNF326Q5BKZ1 582 aaKnown RBP13.3□□□□□ -0.28
LSMEM1-202ENST00000439068 QTRT2Q9H974 415 aaKnown RBP13.3□□□□□ -0.28
LSMEM1-202ENST00000439068 MDM2Q00987 491 aaPredicted RBP13.29□□□□□ -0.28
LSMEM1-202ENST00000439068 GIGYF2Q6Y7W6 1299 aaKnown RBP13.29□□□□□ -0.28
LSMEM1-202ENST00000439068 AFF2P51816 1311 aa13.29□□□□□ -0.28
LSMEM1-202ENST00000439068 RBM6P78332 1123 aaKnown RBP13.28□□□□□ -0.28
LSMEM1-202ENST00000439068 NGLY1Q96IV0 654 aa13.28□□□□□ -0.28
LSMEM1-202ENST00000439068 C8orf37Q96NL8 207 aa13.28□□□□□ -0.28
LSMEM1-202ENST00000439068 ADAMTS13Q76LX8 1427 aa13.28□□□□□ -0.28
LSMEM1-202ENST00000439068 COL16A1Q07092 1604 aaPredicted RBP13.28□□□□□ -0.28
LSMEM1-202ENST00000439068 MS4A1P11836 297 aa13.27□□□□□ -0.29
LSMEM1-202ENST00000439068 NUP155O75694 1391 aa13.27□□□□□ -0.29
LSMEM1-202ENST00000439068 TMEM131LA2VDJ0 1609 aa13.27□□□□□ -0.29
LSMEM1-202ENST00000439068 LRP6O75581 1613 aa13.27□□□□□ -0.29
LSMEM1-202ENST00000439068 COL9A1P20849 921 aa13.26□□□□□ -0.29
LSMEM1-202ENST00000439068 DCCP43146 1447 aa13.26□□□□□ -0.29
LSMEM1-202ENST00000439068 DIP2AQ14689 1571 aa13.26□□□□□ -0.29
LSMEM1-202ENST00000439068 AHDC1Q5TGY3 1603 aaPredicted RBP13.26□□□□□ -0.29
LSMEM1-202ENST00000439068 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
LSMEM1-202ENST00000439068 CDK12Q9NYV4 1490 aaPredicted RBP13.26□□□□□ -0.29
LSMEM1-202ENST00000439068 TRPM2O94759 1503 aa13.25□□□□□ -0.29
LSMEM1-202ENST00000439068 TMUB1Q9BVT8 246 aa13.25□□□□□ -0.29
LSMEM1-202ENST00000439068 ADGRG1Q9Y653 693 aa13.25□□□□□ -0.29
LSMEM1-202ENST00000439068 SETD1AO15047 1707 aaKnown RBP13.25□□□□□ -0.29
LSMEM1-202ENST00000439068 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.25□□□□□ -0.29
LSMEM1-202ENST00000439068 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
LSMEM1-202ENST00000439068 TTC13Q8NBP0 860 aa13.24□□□□□ -0.29
LSMEM1-202ENST00000439068 FAM198AQ9UFP1 575 aa13.24□□□□□ -0.29
LSMEM1-202ENST00000439068 PRSS12P56730 875 aa13.23□□□□□ -0.29
LSMEM1-202ENST00000439068 PPP4R3BQ5MIZ7 849 aa13.23□□□□□ -0.29
LSMEM1-202ENST00000439068 METTL3Q86U44 580 aaKnown RBP13.23□□□□□ -0.29
LSMEM1-202ENST00000439068 CDCA7LQ96GN5 454 aa13.23□□□□□ -0.29
LSMEM1-202ENST00000439068 DDRGK1Q96HY6 314 aa13.23□□□□□ -0.29
LSMEM1-202ENST00000439068 GCC2Q8IWJ2 1684 aa13.23□□□□□ -0.29
LSMEM1-202ENST00000439068 ROCK1Q13464 1354 aa13.22□□□□□ -0.29
LSMEM1-202ENST00000439068 SHPRHQ149N8 1683 aa13.22□□□□□ -0.29
LSMEM1-202ENST00000439068 HOXB1P14653 301 aaPredicted RBP13.22□□□□□ -0.29
LSMEM1-202ENST00000439068 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.29
LSMEM1-202ENST00000439068 SNPHO15079 494 aa13.21□□□□□ -0.29
LSMEM1-202ENST00000439068 ADAMTS2O95450 1211 aa13.21□□□□□ -0.29
LSMEM1-202ENST00000439068 ITGAEP38570 1179 aa13.21□□□□□ -0.29
LSMEM1-202ENST00000439068 PTPRUQ92729 1446 aa13.21□□□□□ -0.3
LSMEM1-202ENST00000439068 OATP04181 439 aa13.2□□□□□ -0.3
LSMEM1-202ENST00000439068 CLCN1P35523 988 aa13.2□□□□□ -0.3
LSMEM1-202ENST00000439068 PXYLP1Q8TE99 480 aa13.2□□□□□ -0.3
LSMEM1-202ENST00000439068 DAXXQ9UER7 740 aaPredicted RBP13.2□□□□□ -0.3
LSMEM1-202ENST00000439068 TRPC5Q9UL62 973 aaPredicted RBP13.2□□□□□ -0.3
LSMEM1-202ENST00000439068 DDX17Q92841 729 aaKnown RBP13.19□□□□□ -0.3
LSMEM1-202ENST00000439068 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
LSMEM1-202ENST00000439068 GPCPD1Q9NPB8 672 aa13.19□□□□□ -0.3
LSMEM1-202ENST00000439068 USP21Q9UK80 565 aa13.19□□□□□ -0.3
LSMEM1-202ENST00000439068 MST1RQ04912 1400 aa13.19□□□□□ -0.3
LSMEM1-202ENST00000439068 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
LSMEM1-202ENST00000439068 C3orf80F5H4A9 247 aa13.18□□□□□ -0.3
LSMEM1-202ENST00000439068 METP08581 1390 aa13.18□□□□□ -0.3
LSMEM1-202ENST00000439068 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
LSMEM1-202ENST00000439068 PNPLA6Q8IY17 1366 aa13.18□□□□□ -0.3
LSMEM1-202ENST00000439068 SSTR3P32745 418 aaPredicted RBP13.17□□□□□ -0.3
LSMEM1-202ENST00000439068 CCDC125Q86Z20 511 aa13.17□□□□□ -0.3
LSMEM1-202ENST00000439068 RBM27Q9P2N5 1060 aaKnown RBP13.17□□□□□ -0.3
LSMEM1-202ENST00000439068 UNC13BO14795 1591 aa13.16□□□□□ -0.3
LSMEM1-202ENST00000439068 E9PCH4 1651 aa13.15□□□□□ -0.3
LSMEM1-202ENST00000439068 ADGRL3Q9HAR2 1447 aa13.15□□□□□ -0.3
LSMEM1-202ENST00000439068 ERICH6Q7L0X2 663 aa13.15□□□□□ -0.3
LSMEM1-202ENST00000439068 TSKSQ9UJT2 592 aa13.15□□□□□ -0.3
LSMEM1-202ENST00000439068 PSDA5PKW4 1024 aaPredicted RBP13.14□□□□□ -0.31
LSMEM1-202ENST00000439068 PTPREP23469 700 aa13.14□□□□□ -0.31
LSMEM1-202ENST00000439068 FNBP4Q8N3X1 1017 aaPredicted RBP13.14□□□□□ -0.31
LSMEM1-202ENST00000439068 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
LSMEM1-202ENST00000439068 RGS12O14924 1447 aa13.13□□□□□ -0.31
LSMEM1-202ENST00000439068 IQGAP3Q86VI3 1631 aa13.13□□□□□ -0.31
LSMEM1-202ENST00000439068 SETBP1Q9Y6X0 1596 aa13.13□□□□□ -0.31
LSMEM1-202ENST00000439068 ORAI2Q96SN7 254 aa13.13□□□□□ -0.31
LSMEM1-202ENST00000439068 FAM217BQ9NTX9 383 aaPredicted RBP13.13□□□□□ -0.31
LSMEM1-202ENST00000439068 C1orf167Q5SNV9 1468 aa13.12□□□□□ -0.31
LSMEM1-202ENST00000439068 RPGRIP1LQ68CZ1 1315 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms