RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 SMG6Q86US8 1419 aaKnown RBP13.15□□□□□ -0.3
CUBN-204ENST00000438254 PSME1Q06323 249 aa13.15□□□□□ -0.3
CUBN-204ENST00000438254 CNGB1Q14028 1251 aaPredicted RBP13.15□□□□□ -0.3
CUBN-204ENST00000438254 KRT28Q7Z3Y7 464 aa13.15□□□□□ -0.3
CUBN-204ENST00000438254 MORC1Q86VD1 984 aa13.15□□□□□ -0.3
CUBN-204ENST00000438254 MS4A3Q96HJ5 214 aa13.15□□□□□ -0.3
CUBN-204ENST00000438254 PLSCR2Q9NRY7 297 aa13.15□□□□□ -0.3
CUBN-204ENST00000438254 ROBO1Q9Y6N7 1651 aa13.15□□□□□ -0.31
CUBN-204ENST00000438254 AHDC1Q5TGY3 1603 aaPredicted RBP13.14□□□□□ -0.31
CUBN-204ENST00000438254 SLC39A7Q92504 469 aa13.14□□□□□ -0.31
CUBN-204ENST00000438254 SLIT3O75094 1523 aa13.13□□□□□ -0.31
CUBN-204ENST00000438254 C7P10643 843 aa13.13□□□□□ -0.31
CUBN-204ENST00000438254 DDX17Q92841 729 aaKnown RBP13.13□□□□□ -0.31
CUBN-204ENST00000438254 COG3Q96JB2 828 aa13.13□□□□□ -0.31
CUBN-204ENST00000438254 CRYBG1Q9Y4K1 1723 aa13.13□□□□□ -0.31
CUBN-204ENST00000438254 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
CUBN-204ENST00000438254 COL3A1P02461 1466 aaPredicted RBP13.12□□□□□ -0.31
CUBN-204ENST00000438254 INSRP06213 1382 aa13.12□□□□□ -0.31
CUBN-204ENST00000438254 PNPLA6Q8IY17 1366 aa13.12□□□□□ -0.31
CUBN-204ENST00000438254 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
CUBN-204ENST00000438254 XPCQ01831 940 aaPredicted RBP13.12□□□□□ -0.31
CUBN-204ENST00000438254 TNS3Q68CZ2 1445 aa13.12□□□□□ -0.31
CUBN-204ENST00000438254 USP19O94966 1318 aa13.12□□□□□ -0.31
CUBN-204ENST00000438254 CERKQ8TCT0 537 aa13.11□□□□□ -0.31
CUBN-204ENST00000438254 METRNQ9UJH8 293 aa13.11□□□□□ -0.31
CUBN-204ENST00000438254 NFAT5O94916 1531 aa13.11□□□□□ -0.31
CUBN-204ENST00000438254 SPATA31A3Q5VYP0 1347 aa13.11□□□□□ -0.31
CUBN-204ENST00000438254 ABTB2Q8N961 1025 aa13.1□□□□□ -0.31
CUBN-204ENST00000438254 PNISRQ8TF01 805 aaKnown RBP13.1□□□□□ -0.31
CUBN-204ENST00000438254 MRS2Q9HD23 443 aa13.1□□□□□ -0.31
CUBN-204ENST00000438254 POLKQ9UBT6 870 aa13.1□□□□□ -0.31
CUBN-204ENST00000438254 FBLN1P23142 703 aa13.09□□□□□ -0.31
CUBN-204ENST00000438254 MTHFSP49914 203 aa13.09□□□□□ -0.31
CUBN-204ENST00000438254 NLRP6P59044 892 aa13.09□□□□□ -0.31
CUBN-204ENST00000438254 PHRF1Q9P1Y6 1649 aaKnown RBP13.09□□□□□ -0.31
CUBN-204ENST00000438254 CDK12Q9NYV4 1490 aaPredicted RBP13.09□□□□□ -0.31
CUBN-204ENST00000438254 MAP2P11137 1827 aaKnown RBP13.09□□□□□ -0.31
CUBN-204ENST00000438254 SHPRHQ149N8 1683 aa13.08□□□□□ -0.31
CUBN-204ENST00000438254 PEAK1Q9H792 1746 aa13.08□□□□□ -0.32
CUBN-204ENST00000438254 TOM1O60784 492 aa13.08□□□□□ -0.32
CUBN-204ENST00000438254 TNNT2P45379 298 aaPredicted RBP13.08□□□□□ -0.32
CUBN-204ENST00000438254 ARHGEF10O15013 1369 aa13.07□□□□□ -0.32
CUBN-204ENST00000438254 COL16A1Q07092 1604 aaPredicted RBP13.07□□□□□ -0.32
CUBN-204ENST00000438254 NUTM2GQ5VZR2 741 aa13.06□□□□□ -0.32
CUBN-204ENST00000438254 TSPYL2Q9H2G4 693 aaPredicted RBP13.06□□□□□ -0.32
CUBN-204ENST00000438254 KIF24Q5T7B8 1368 aa13.06□□□□□ -0.32
CUBN-204ENST00000438254 COL22A1Q8NFW1 1626 aaPredicted RBP13.06□□□□□ -0.32
CUBN-204ENST00000438254 MAMSTRQ6ZN01 415 aa13.05□□□□□ -0.32
CUBN-204ENST00000438254 EMILIN1Q9Y6C2 1016 aa13.05□□□□□ -0.32
CUBN-204ENST00000438254 MAP3K19Q56UN5 1328 aa13.05□□□□□ -0.32
CUBN-204ENST00000438254 ABCA3Q99758 1704 aa13.05□□□□□ -0.32
CUBN-204ENST00000438254 POTEMA6NI47 508 aa13.04□□□□□ -0.32
CUBN-204ENST00000438254 UBAP1LF5GYI3 381 aa13.04□□□□□ -0.32
CUBN-204ENST00000438254 RRS1Q15050 365 aaKnown RBP13.04□□□□□ -0.32
CUBN-204ENST00000438254 PHLPP1O60346 1717 aa13.03□□□□□ -0.32
CUBN-204ENST00000438254 LTN1O94822 1766 aa13.03□□□□□ -0.32
CUBN-204ENST00000438254 GCP02774 474 aa13.03□□□□□ -0.32
CUBN-204ENST00000438254 KCNH5Q8NCM2 988 aa13.03□□□□□ -0.32
CUBN-204ENST00000438254 RTL1A6NKG5 1358 aa13.03□□□□□ -0.32
CUBN-204ENST00000438254 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
CUBN-204ENST00000438254 ARHGEF25Q86VW2 580 aa13.02□□□□□ -0.33
CUBN-204ENST00000438254 RGPD1P0DJD0 1748 aa13.02□□□□□ -0.33
CUBN-204ENST00000438254 COL18A1P39060 1754 aa13.02□□□□□ -0.33
CUBN-204ENST00000438254 CPDO75976 1380 aa13.01□□□□□ -0.33
CUBN-204ENST00000438254 FLT4P35916 1363 aa13.01□□□□□ -0.33
CUBN-204ENST00000438254 BLMP54132 1417 aaPredicted RBP13.01□□□□□ -0.33
CUBN-204ENST00000438254 ABCC6O95255 1503 aa13.01□□□□□ -0.33
CUBN-204ENST00000438254 IL13P35225 146 aa13□□□□□ -0.33
CUBN-204ENST00000438254 LRRC59Q96AG4 307 aaKnown RBP13□□□□□ -0.33
CUBN-204ENST00000438254 KIF12Q96FN5 646 aa13□□□□□ -0.33
CUBN-204ENST00000438254 CFAP53Q96M91 514 aa13□□□□□ -0.33
CUBN-204ENST00000438254 HOXC9P31274 260 aa12.99□□□□□ -0.33
CUBN-204ENST00000438254 PIP4K2BP78356 416 aa12.99□□□□□ -0.33
CUBN-204ENST00000438254 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
CUBN-204ENST00000438254 FAM9BQ8IZU0 186 aa12.99□□□□□ -0.33
CUBN-204ENST00000438254 ADAMTS8Q9UP79 889 aa12.99□□□□□ -0.33
CUBN-204ENST00000438254 SOX12O15370 315 aa12.98□□□□□ -0.33
CUBN-204ENST00000438254 DIAPH1O60610 1272 aaKnown RBP12.98□□□□□ -0.33
CUBN-204ENST00000438254 HSP90AB2PQ58FF8 381 aa12.98□□□□□ -0.33
CUBN-204ENST00000438254 POTEGQ6S5H5 508 aa12.98□□□□□ -0.33
CUBN-204ENST00000438254 CABLES1Q8TDN4 633 aa12.98□□□□□ -0.33
CUBN-204ENST00000438254 IP6K1Q92551 441 aa12.98□□□□□ -0.33
CUBN-204ENST00000438254 LMO7Q8WWI1 1683 aa12.98□□□□□ -0.33
CUBN-204ENST00000438254 ATN1P54259 1190 aaPredicted RBP12.97□□□□□ -0.33
CUBN-204ENST00000438254 EIF4A2Q14240 407 aaKnown RBP12.97□□□□□ -0.33
CUBN-204ENST00000438254 PCDH10Q9P2E7 1040 aa12.97□□□□□ -0.33
CUBN-204ENST00000438254 PPM1GO15355 546 aaPredicted RBP12.96□□□□□ -0.33
CUBN-204ENST00000438254 POTEJP0CG39 1038 aa12.96□□□□□ -0.33
CUBN-204ENST00000438254 NCAPD2Q15021 1401 aa12.96□□□□□ -0.34
CUBN-204ENST00000438254 CAMTA1Q9Y6Y1 1673 aa12.96□□□□□ -0.34
CUBN-204ENST00000438254 AMPHP49418 695 aa12.95□□□□□ -0.34
CUBN-204ENST00000438254 WDR43Q15061 677 aaKnown RBP eCLIP12.95□□□□□ -0.34
CUBN-204ENST00000438254 KIAA0232Q92628 1395 aa12.94□□□□□ -0.34
CUBN-204ENST00000438254 SCUBE2Q9NQ36 999 aa12.94□□□□□ -0.34
CUBN-204ENST00000438254 AXIN2Q9Y2T1 843 aa12.94□□□□□ -0.34
CUBN-204ENST00000438254 KDRP35968 1356 aa12.94□□□□□ -0.34
CUBN-204ENST00000438254 IGSF1Q8N6C5 1336 aa12.93□□□□□ -0.34
CUBN-204ENST00000438254 ZC3H6P61129 1189 aaKnown RBP12.93□□□□□ -0.34
CUBN-204ENST00000438254 PLEKHF1Q96S99 279 aa12.93□□□□□ -0.34
CUBN-204ENST00000438254 NUDCQ9Y266 331 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms