RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 FYB1O15117 783 aa13.55□□□□□ -0.24
PTCH1-209ENST00000437951 UPF3BQ9BZI7 483 aaKnown RBP13.55□□□□□ -0.24
PTCH1-209ENST00000437951 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-209ENST00000437951 CARMIL1Q5VZK9 1371 aa13.54□□□□□ -0.24
PTCH1-209ENST00000437951 SFPQP23246 707 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTCH1-209ENST00000437951 GSDMDP57764 484 aa13.54□□□□□ -0.24
PTCH1-209ENST00000437951 PANK3Q9H999 370 aa13.54□□□□□ -0.24
PTCH1-209ENST00000437951 ZSCAN31Q96LW9 406 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-209ENST00000437951 FIBPO43427 364 aa13.54□□□□□ -0.24
PTCH1-209ENST00000437951 HSPA4P34932 840 aa13.54□□□□□ -0.24
PTCH1-209ENST00000437951 L3MBTL2Q969R5 705 aa13.54□□□□□ -0.24
PTCH1-209ENST00000437951 CPSF2Q9P2I0 782 aaKnown RBP13.54□□□□□ -0.24
PTCH1-209ENST00000437951 MCM4P33991 863 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 NEK4P51957 841 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 CCDC27Q2M243 656 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 MAP3K11Q16584 847 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 RNF187Q5TA31 235 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-209ENST00000437951 CARMIL2Q6F5E8 1435 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 DDX46Q7L014 1031 aaKnown RBP13.53□□□□□ -0.24
PTCH1-209ENST00000437951 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 FMNL2Q96PY5 1086 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 SWAP70Q9UH65 585 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 TEFQ10587 303 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 COG3Q96JB2 828 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 SMARCC1Q92922 1105 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-209ENST00000437951 DNAI2Q9GZS0 605 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 CYP46A1Q9Y6A2 500 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 POTEJP0CG39 1038 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 LNPKQ9C0E8 428 aa13.53□□□□□ -0.24
PTCH1-209ENST00000437951 BCL2L13Q9BXK5 485 aa13.52□□□□□ -0.24
PTCH1-209ENST00000437951 IFFO1Q0D2I5 559 aa13.52□□□□□ -0.25
PTCH1-209ENST00000437951 KRT18P05783 430 aaKnown RBP13.52□□□□□ -0.25
PTCH1-209ENST00000437951 SPA17Q15506 151 aa13.52□□□□□ -0.25
PTCH1-209ENST00000437951 IPO4Q8TEX9 1081 aaKnown RBP13.52□□□□□ -0.25
PTCH1-209ENST00000437951 TUBB4AP04350 444 aa13.52□□□□□ -0.25
PTCH1-209ENST00000437951 PDE3AQ14432 1141 aa13.52□□□□□ -0.25
PTCH1-209ENST00000437951 TRIM22Q8IYM9 498 aa13.52□□□□□ -0.25
PTCH1-209ENST00000437951 KRT222Q8N1A0 295 aa13.52□□□□□ -0.25
PTCH1-209ENST00000437951 CAVIN2O95810 425 aa13.52□□□□□ -0.25
PTCH1-209ENST00000437951 ME1P48163 572 aa13.52□□□□□ -0.25
PTCH1-209ENST00000437951 RBM28Q9NW13 759 aaKnown RBP13.52□□□□□ -0.25
PTCH1-209ENST00000437951 NOL7Q9UMY1 257 aaKnown RBP13.52□□□□□ -0.25
PTCH1-209ENST00000437951 SRCIN1Q9C0H9 1055 aa13.51□□□□□ -0.25
PTCH1-209ENST00000437951 TRIM21P19474 475 aaKnown RBP13.51□□□□□ -0.25
PTCH1-209ENST00000437951 BBXQ8WY36 941 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-209ENST00000437951 CTAGE5O15320 804 aa13.51□□□□□ -0.25
PTCH1-209ENST00000437951 RRP7AQ9Y3A4 280 aaKnown RBP13.51□□□□□ -0.25
PTCH1-209ENST00000437951 NSRP1Q9H0G5 558 aaKnown RBP13.51□□□□□ -0.25
PTCH1-209ENST00000437951 CEP131Q9UPN4 1083 aa13.51□□□□□ -0.25
PTCH1-209ENST00000437951 BACH2Q9BYV9 841 aa13.51□□□□□ -0.25
PTCH1-209ENST00000437951 ZMYND15Q9H091 742 aa13.51□□□□□ -0.25
PTCH1-209ENST00000437951 MIA2Q96PC5 1412 aa13.51□□□□□ -0.25
PTCH1-209ENST00000437951 CCDC183Q5T5S1 534 aa13.5□□□□□ -0.25
PTCH1-209ENST00000437951 PAF1Q8N7H5 531 aa13.5□□□□□ -0.25
PTCH1-209ENST00000437951 PPP6R1Q9UPN7 881 aa13.5□□□□□ -0.25
PTCH1-209ENST00000437951 GNAI3P08754 354 aa13.5□□□□□ -0.25
PTCH1-209ENST00000437951 SPATA32Q96LK8 384 aa13.5□□□□□ -0.25
PTCH1-209ENST00000437951 PPP4R3BQ5MIZ7 849 aa13.5□□□□□ -0.25
PTCH1-209ENST00000437951 VPS36Q86VN1 386 aa13.5□□□□□ -0.25
PTCH1-209ENST00000437951 TBC1D2BQ9UPU7 963 aa13.5□□□□□ -0.25
PTCH1-209ENST00000437951 CCDC57Q2TAC2 916 aa13.5□□□□□ -0.25
PTCH1-209ENST00000437951 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
PTCH1-209ENST00000437951 PAIP2Q9BPZ3 127 aaKnown RBP13.49□□□□□ -0.25
PTCH1-209ENST00000437951 WASF1Q92558 559 aa13.49□□□□□ -0.25
PTCH1-209ENST00000437951 FAM177A1Q8N128 213 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-209ENST00000437951 ANKS4BQ8N8V4 417 aa13.49□□□□□ -0.25
PTCH1-209ENST00000437951 PAFAH1B1P43034 410 aa13.49□□□□□ -0.25
PTCH1-209ENST00000437951 FOSBP53539 338 aa13.49□□□□□ -0.25
PTCH1-209ENST00000437951 EHBP1Q8NDI1 1231 aa13.49□□□□□ -0.25
PTCH1-209ENST00000437951 BMP2KQ9NSY1 1161 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-209ENST00000437951 DIAPH1O60610 1272 aaKnown RBP13.48□□□□□ -0.25
PTCH1-209ENST00000437951 FGFR1OPO95684 399 aaKnown RBP13.48□□□□□ -0.25
PTCH1-209ENST00000437951 FKBP5Q13451 457 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-209ENST00000437951 SCAPERQ9BY12 1400 aa13.48□□□□□ -0.25
PTCH1-209ENST00000437951 CCDC7Q96M83 1385 aa13.48□□□□□ -0.25
PTCH1-209ENST00000437951 STAC3Q96MF2 364 aa13.48□□□□□ -0.25
PTCH1-209ENST00000437951 UBTFL1P0CB47 393 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-209ENST00000437951 TANGO6Q9C0B7 1094 aa13.48□□□□□ -0.25
PTCH1-209ENST00000437951 ANO10Q9NW15 660 aa13.48□□□□□ -0.25
PTCH1-209ENST00000437951 USO1O60763 962 aaKnown RBP13.48□□□□□ -0.25
PTCH1-209ENST00000437951 GTF2F1P35269 517 aaKnown RBP eCLIP13.48□□□□□ -0.25
PTCH1-209ENST00000437951 PPP1R12BO60237 982 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-209ENST00000437951 RIPK4P57078 832 aa13.47□□□□□ -0.25
PTCH1-209ENST00000437951 FSD1Q9BTV5 496 aa13.47□□□□□ -0.25
PTCH1-209ENST00000437951 TMCO5BA8MYB1 307 aa13.47□□□□□ -0.25
PTCH1-209ENST00000437951 KIF3CO14782 793 aa13.47□□□□□ -0.25
PTCH1-209ENST00000437951 TDO2P48775 406 aa13.47□□□□□ -0.25
PTCH1-209ENST00000437951 KRT32Q14532 448 aa13.47□□□□□ -0.25
PTCH1-209ENST00000437951 DDX23Q9BUQ8 820 aaKnown RBP13.47□□□□□ -0.25
PTCH1-209ENST00000437951 HMGB1P09429 215 aaKnown RBP13.47□□□□□ -0.25
PTCH1-209ENST00000437951 CEP112Q8N8E3 955 aa13.47□□□□□ -0.25
PTCH1-209ENST00000437951 PRDM10Q9NQV6 1147 aa13.47□□□□□ -0.25
PTCH1-209ENST00000437951 DHX57Q6P158 1386 aaKnown RBP13.47□□□□□ -0.25
PTCH1-209ENST00000437951 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
PTCH1-209ENST00000437951 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-209ENST00000437951 WASHC4Q2M389 1173 aa13.47□□□□□ -0.25
PTCH1-209ENST00000437951 ALS2CR12Q96Q35 445 aa13.47□□□□□ -0.25
PTCH1-209ENST00000437951 CCDC171Q6TFL3 1326 aa13.46□□□□□ -0.25
PTCH1-209ENST00000437951 APAF1O14727 1248 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms