RNA–Protein interactions for RNA: ENST00000437892.1

LINC00858-202, long intergenic non-protein coding RNA 858, humanhuman

TSL 3

Gene LINC00858, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-202ENST00000437892 NUTM2FA1L443 756 aa12.68□□□□□ -0.38
LINC00858-202ENST00000437892 PROSER2Q86WR7 435 aaPredicted RBP12.68□□□□□ -0.38
LINC00858-202ENST00000437892 RASEFQ8IZ41 740 aa12.68□□□□□ -0.38
LINC00858-202ENST00000437892 PHRF1Q9P1Y6 1649 aaKnown RBP12.68□□□□□ -0.38
LINC00858-202ENST00000437892 DIAPH1O60610 1272 aaKnown RBP12.67□□□□□ -0.38
LINC00858-202ENST00000437892 PLEKHG5O94827 1062 aa12.67□□□□□ -0.38
LINC00858-202ENST00000437892 PMFBP1Q8TBY8 1022 aa12.67□□□□□ -0.38
LINC00858-202ENST00000437892 RUNDC1Q96C34 613 aa12.67□□□□□ -0.38
LINC00858-202ENST00000437892 XIRP1Q702N8 1843 aaKnown RBP12.67□□□□□ -0.38
LINC00858-202ENST00000437892 RGPD1P0DJD0 1748 aa12.66□□□□□ -0.38
LINC00858-202ENST00000437892 PEAK1Q9H792 1746 aa12.66□□□□□ -0.38
LINC00858-202ENST00000437892 SLIT3O75094 1523 aa12.66□□□□□ -0.38
LINC00858-202ENST00000437892 RNF123Q5XPI4 1314 aa12.65□□□□□ -0.38
LINC00858-202ENST00000437892 CCDC27Q2M243 656 aa12.65□□□□□ -0.38
LINC00858-202ENST00000437892 C14orf37Q86TY3 774 aa12.65□□□□□ -0.38
LINC00858-202ENST00000437892 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
LINC00858-202ENST00000437892 NFAT5O94916 1531 aa12.65□□□□□ -0.38
LINC00858-202ENST00000437892 RTL1A6NKG5 1358 aa12.65□□□□□ -0.38
LINC00858-202ENST00000437892 PNNQ9H307 717 aaKnown RBP12.64□□□□□ -0.39
LINC00858-202ENST00000437892 EMILIN1Q9Y6C2 1016 aa12.64□□□□□ -0.39
LINC00858-202ENST00000437892 SBNO1A3KN83 1393 aa12.64□□□□□ -0.39
LINC00858-202ENST00000437892 FLT4P35916 1363 aa12.64□□□□□ -0.39
LINC00858-202ENST00000437892 MSH6P52701 1360 aa12.64□□□□□ -0.39
LINC00858-202ENST00000437892 APAF1O14727 1248 aa12.63□□□□□ -0.39
LINC00858-202ENST00000437892 NEFLP07196 543 aa12.63□□□□□ -0.39
LINC00858-202ENST00000437892 CADPS2Q86UW7 1296 aa12.63□□□□□ -0.39
LINC00858-202ENST00000437892 CCDC146Q8IYE0 955 aa12.63□□□□□ -0.39
LINC00858-202ENST00000437892 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
LINC00858-202ENST00000437892 ALS2Q96Q42 1657 aa12.63□□□□□ -0.39
LINC00858-202ENST00000437892 FCHSD2O94868 740 aa12.62□□□□□ -0.39
LINC00858-202ENST00000437892 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
LINC00858-202ENST00000437892 IL13P35225 146 aa12.62□□□□□ -0.39
LINC00858-202ENST00000437892 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
LINC00858-202ENST00000437892 ERICH6BQ5W0A0 696 aa12.62□□□□□ -0.39
LINC00858-202ENST00000437892 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
LINC00858-202ENST00000437892 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
LINC00858-202ENST00000437892 MED1Q15648 1581 aaPredicted RBP12.61□□□□□ -0.39
LINC00858-202ENST00000437892 ATF3P18847 181 aa12.61□□□□□ -0.39
LINC00858-202ENST00000437892 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
LINC00858-202ENST00000437892 ESCO1Q5FWF5 840 aa12.61□□□□□ -0.39
LINC00858-202ENST00000437892 TRMT2AQ8IZ69 625 aaKnown RBP12.61□□□□□ -0.39
LINC00858-202ENST00000437892 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
LINC00858-202ENST00000437892 ARHGEF10O15013 1369 aa12.6□□□□□ -0.39
LINC00858-202ENST00000437892 TCP11L2Q8N4U5 519 aa12.6□□□□□ -0.39
LINC00858-202ENST00000437892 RSPH6AQ9H0K4 717 aa12.6□□□□□ -0.39
LINC00858-202ENST00000437892 SUPT16HQ9Y5B9 1047 aaKnown RBP12.6□□□□□ -0.39
LINC00858-202ENST00000437892 USP19O94966 1318 aa12.6□□□□□ -0.39
LINC00858-202ENST00000437892 MAP3K19Q56UN5 1328 aa12.6□□□□□ -0.39
LINC00858-202ENST00000437892 PXDNQ92626 1479 aa12.59□□□□□ -0.39
LINC00858-202ENST00000437892 ABCC6O95255 1503 aa12.59□□□□□ -0.39
LINC00858-202ENST00000437892 E9PSI1 815 aa12.59□□□□□ -0.39
LINC00858-202ENST00000437892 RRS1Q15050 365 aaKnown RBP12.59□□□□□ -0.39
LINC00858-202ENST00000437892 WWC1Q8IX03 1113 aa12.59□□□□□ -0.39
LINC00858-202ENST00000437892 MAPK8IP3Q9UPT6 1336 aa12.59□□□□□ -0.39
LINC00858-202ENST00000437892 U2SURPO15042 1029 aaKnown RBP12.58□□□□□ -0.4
LINC00858-202ENST00000437892 GABBR2O75899 941 aa12.58□□□□□ -0.4
LINC00858-202ENST00000437892 NLRP6P59044 892 aa12.58□□□□□ -0.4
LINC00858-202ENST00000437892 SLFN5Q08AF3 891 aa12.58□□□□□ -0.4
LINC00858-202ENST00000437892 DUSP27Q5VZP5 1158 aa12.58□□□□□ -0.4
LINC00858-202ENST00000437892 WDR63Q8IWG1 891 aa12.58□□□□□ -0.4
LINC00858-202ENST00000437892 ABTB2Q8N961 1025 aa12.58□□□□□ -0.4
LINC00858-202ENST00000437892 ORAI2Q96SN7 254 aa12.58□□□□□ -0.4
LINC00858-202ENST00000437892 KDRP35968 1356 aa12.57□□□□□ -0.4
LINC00858-202ENST00000437892 LTN1O94822 1766 aa12.57□□□□□ -0.4
LINC00858-202ENST00000437892 PPM1GO15355 546 aaPredicted RBP12.57□□□□□ -0.4
LINC00858-202ENST00000437892 FBLN1P23142 703 aa12.57□□□□□ -0.4
LINC00858-202ENST00000437892 PSME1Q06323 249 aa12.57□□□□□ -0.4
LINC00858-202ENST00000437892 KCNH5Q8NCM2 988 aa12.57□□□□□ -0.4
LINC00858-202ENST00000437892 CDCA7LQ96GN5 454 aa12.57□□□□□ -0.4
LINC00858-202ENST00000437892 IL16Q14005 1332 aa12.57□□□□□ -0.4
LINC00858-202ENST00000437892 NPHP3Q7Z494 1330 aa12.57□□□□□ -0.4
LINC00858-202ENST00000437892 ZNF335Q9H4Z2 1342 aaPredicted RBP12.57□□□□□ -0.4
LINC00858-202ENST00000437892 TNS3Q68CZ2 1445 aa12.56□□□□□ -0.4
LINC00858-202ENST00000437892 EIF4A2Q14240 407 aaKnown RBP12.56□□□□□ -0.4
LINC00858-202ENST00000437892 PHF12Q96QT6 1004 aa12.56□□□□□ -0.4
LINC00858-202ENST00000437892 TSPYL2Q9H2G4 693 aaPredicted RBP12.56□□□□□ -0.4
LINC00858-202ENST00000437892 SALL2Q9Y467 1007 aaPredicted RBP12.56□□□□□ -0.4
LINC00858-202ENST00000437892 CRYBG1Q9Y4K1 1723 aa12.56□□□□□ -0.4
LINC00858-202ENST00000437892 TMPOP42166 694 aaKnown RBP12.55□□□□□ -0.4
LINC00858-202ENST00000437892 RCAN3Q9UKA8 241 aa12.55□□□□□ -0.4
LINC00858-202ENST00000437892 IGSF1Q8N6C5 1336 aa12.55□□□□□ -0.4
LINC00858-202ENST00000437892 CAMTA1Q9Y6Y1 1673 aa12.54□□□□□ -0.4
LINC00858-202ENST00000437892 SENP3-EIF4A1A0A087X0R7 540 aa12.54□□□□□ -0.4
LINC00858-202ENST00000437892 PRKAR2BP31323 418 aa12.54□□□□□ -0.4
LINC00858-202ENST00000437892 KLHL34Q8N239 644 aa12.54□□□□□ -0.4
LINC00858-202ENST00000437892 NHSL1Q5SYE7 1610 aa12.54□□□□□ -0.4
LINC00858-202ENST00000437892 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
LINC00858-202ENST00000437892 FOXO3O43524 673 aa12.53□□□□□ -0.4
LINC00858-202ENST00000437892 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
LINC00858-202ENST00000437892 NEFMP07197 916 aa12.53□□□□□ -0.4
LINC00858-202ENST00000437892 HOXC9P31274 260 aa12.53□□□□□ -0.4
LINC00858-202ENST00000437892 NFE2L2Q16236 605 aa12.53□□□□□ -0.4
LINC00858-202ENST00000437892 KRT28Q7Z3Y7 464 aa12.53□□□□□ -0.4
LINC00858-202ENST00000437892 LTBP4Q8N2S1 1624 aa12.52□□□□□ -0.4
LINC00858-202ENST00000437892 AMPHP49418 695 aa12.52□□□□□ -0.41
LINC00858-202ENST00000437892 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.41
LINC00858-202ENST00000437892 HSP90AB2PQ58FF8 381 aa12.52□□□□□ -0.41
LINC00858-202ENST00000437892 LMOD3Q0VAK6 560 aa12.51□□□□□ -0.41
LINC00858-202ENST00000437892 MYH16Q9H6N6 1097 aa12.51□□□□□ -0.41
LINC00858-202ENST00000437892 TRIM35Q9UPQ4 493 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms