RNA–Protein interactions for RNA: ENST00000435981.5

LINC01393-202, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 1 (best) BASIC

Gene LINC01393, Length 1,187 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-202ENST00000435981 CARMIL2Q6F5E8 1435 aa11.26□□□□□ -0.61
LINC01393-202ENST00000435981 BAP1Q92560 729 aa11.26□□□□□ -0.61
LINC01393-202ENST00000435981 RNF225M0QZC1 329 aaPredicted RBP11.25□□□□□ -0.61
LINC01393-202ENST00000435981 BMP1P13497 986 aa11.25□□□□□ -0.61
LINC01393-202ENST00000435981 KCNH2Q12809 1159 aa11.25□□□□□ -0.61
LINC01393-202ENST00000435981 MTMR2Q13614 643 aa11.25□□□□□ -0.61
LINC01393-202ENST00000435981 BEGAINQ9BUH8 593 aa11.25□□□□□ -0.61
LINC01393-202ENST00000435981 WASF2Q9Y6W5 498 aa11.25□□□□□ -0.61
LINC01393-202ENST00000435981 XP32Q5T750 250 aa11.24□□□□□ -0.61
LINC01393-202ENST00000435981 PRG4Q92954 1404 aaPredicted RBP11.24□□□□□ -0.61
LINC01393-202ENST00000435981 SHROOM2Q13796 1616 aa11.24□□□□□ -0.61
LINC01393-202ENST00000435981 CAPN5O15484 640 aaPredicted RBP11.23□□□□□ -0.61
LINC01393-202ENST00000435981 TLL2Q9Y6L7 1015 aa11.23□□□□□ -0.61
LINC01393-202ENST00000435981 DESI1Q6ICB0 168 aa11.22□□□□□ -0.61
LINC01393-202ENST00000435981 TBC1D2Q9BYX2 928 aa11.22□□□□□ -0.61
LINC01393-202ENST00000435981 TNIKQ9UKE5 1360 aa11.22□□□□□ -0.61
LINC01393-202ENST00000435981 ARHGEF11O15085 1522 aa11.21□□□□□ -0.61
LINC01393-202ENST00000435981 UGGT2Q9NYU1 1516 aa11.21□□□□□ -0.61
LINC01393-202ENST00000435981 IGHA1P01876 353 aa11.21□□□□□ -0.61
LINC01393-202ENST00000435981 ZNF511Q8NB15 262 aa11.21□□□□□ -0.61
LINC01393-202ENST00000435981 PCDHB15Q9Y5E8 787 aa11.21□□□□□ -0.61
LINC01393-202ENST00000435981 TTBK1Q5TCY1 1321 aaPredicted RBP11.2□□□□□ -0.62
LINC01393-202ENST00000435981 LOC105371045A0A1W2PR82 267 aa11.2□□□□□ -0.62
LINC01393-202ENST00000435981 SPDYE5A6NIY4 337 aa11.2□□□□□ -0.62
LINC01393-202ENST00000435981 RSBN1LQ6PCB5 846 aaPredicted RBP11.2□□□□□ -0.62
LINC01393-202ENST00000435981 PARP9Q8IXQ6 854 aa11.2□□□□□ -0.62
LINC01393-202ENST00000435981 RIMBP3CA6NJZ7 1639 aa11.2□□□□□ -0.62
LINC01393-202ENST00000435981 RIMBP3BA6NNM3 1639 aa11.2□□□□□ -0.62
LINC01393-202ENST00000435981 RIMBP3Q9UFD9 1639 aa11.2□□□□□ -0.62
LINC01393-202ENST00000435981 EFCAB5A4FU69 1503 aa11.19□□□□□ -0.62
LINC01393-202ENST00000435981 KIAA0556O60303 1618 aa11.18□□□□□ -0.62
LINC01393-202ENST00000435981 CFAP99D6REC4 459 aa11.18□□□□□ -0.62
LINC01393-202ENST00000435981 VARSP26640 1264 aaKnown RBP11.17□□□□□ -0.62
LINC01393-202ENST00000435981 GJA5P36382 358 aa11.17□□□□□ -0.62
LINC01393-202ENST00000435981 LYPD8Q6UX82 237 aa11.17□□□□□ -0.62
LINC01393-202ENST00000435981 ZFP42Q96MM3 310 aa11.17□□□□□ -0.62
LINC01393-202ENST00000435981 CLIP1P30622 1438 aa11.17□□□□□ -0.62
LINC01393-202ENST00000435981 TRIM66O15016 1216 aa11.16□□□□□ -0.62
LINC01393-202ENST00000435981 SPTLC1O15269 473 aa11.15□□□□□ -0.62
LINC01393-202ENST00000435981 HRCP23327 699 aa11.15□□□□□ -0.62
LINC01393-202ENST00000435981 CTHP32929 405 aa11.15□□□□□ -0.62
LINC01393-202ENST00000435981 NNTQ13423 1086 aa11.15□□□□□ -0.62
LINC01393-202ENST00000435981 KRTAP4-8Q9BYQ9 185 aa11.15□□□□□ -0.62
LINC01393-202ENST00000435981 PTPRGP23470 1445 aa11.15□□□□□ -0.62
LINC01393-202ENST00000435981 SAMD9Q5K651 1589 aa11.15□□□□□ -0.62
LINC01393-202ENST00000435981 DISP1Q96F81 1524 aa11.14□□□□□ -0.63
LINC01393-202ENST00000435981 MPNDQ8N594 471 aa11.14□□□□□ -0.63
LINC01393-202ENST00000435981 CEP162Q5TB80 1403 aa11.14□□□□□ -0.63
LINC01393-202ENST00000435981 ERCC6L2Q5T890 1561 aa11.14□□□□□ -0.63
LINC01393-202ENST00000435981 F12P00748 615 aaPredicted RBP11.13□□□□□ -0.63
LINC01393-202ENST00000435981 CYB5RLQ6IPT4 315 aa11.13□□□□□ -0.63
LINC01393-202ENST00000435981 MAP10Q9P2G4 905 aa11.13□□□□□ -0.63
LINC01393-202ENST00000435981 PLEKHG3A1L390 1219 aa11.12□□□□□ -0.63
LINC01393-202ENST00000435981 DIXDC1Q155Q3 683 aa11.12□□□□□ -0.63
LINC01393-202ENST00000435981 CABLES1Q8TDN4 633 aa11.12□□□□□ -0.63
LINC01393-202ENST00000435981 FOXJ1Q92949 421 aa11.12□□□□□ -0.63
LINC01393-202ENST00000435981 DNMT3AQ9Y6K1 912 aaPredicted RBP11.12□□□□□ -0.63
LINC01393-202ENST00000435981 FHOD3Q2V2M9 1422 aa11.11□□□□□ -0.63
LINC01393-202ENST00000435981 TIMP2P16035 220 aa11.11□□□□□ -0.63
LINC01393-202ENST00000435981 GPAT2Q6NUI2 795 aa11.11□□□□□ -0.63
LINC01393-202ENST00000435981 RIC3Q7Z5B4 369 aa11.11□□□□□ -0.63
LINC01393-202ENST00000435981 ZBTB3Q9H5J0 574 aa11.11□□□□□ -0.63
LINC01393-202ENST00000435981 ARAP1Q96P48 1450 aa11.11□□□□□ -0.63
LINC01393-202ENST00000435981 FMN1Q68DA7 1419 aa11.1□□□□□ -0.63
LINC01393-202ENST00000435981 KLF16Q9BXK1 252 aaPredicted RBP11.1□□□□□ -0.63
LINC01393-202ENST00000435981 ADAMTS8Q9UP79 889 aa11.1□□□□□ -0.63
LINC01393-202ENST00000435981 ARHGAP35Q9NRY4 1499 aa11.1□□□□□ -0.63
LINC01393-202ENST00000435981 FOXK2Q01167 660 aa11.09□□□□□ -0.63
LINC01393-202ENST00000435981 CSPP1Q1MSJ5 1256 aa11.09□□□□□ -0.63
LINC01393-202ENST00000435981 AK7Q96M32 723 aa11.09□□□□□ -0.63
LINC01393-202ENST00000435981 ATP1B4Q9UN42 357 aaPredicted RBP11.09□□□□□ -0.63
LINC01393-202ENST00000435981 PER1O15534 1290 aaPredicted RBP11.08□□□□□ -0.64
LINC01393-202ENST00000435981 WDR4P57081 412 aaKnown RBP11.08□□□□□ -0.64
LINC01393-202ENST00000435981 PRPF38BQ5VTL8 546 aaKnown RBP11.08□□□□□ -0.64
LINC01393-202ENST00000435981 MRPL14Q6P1L8 145 aaKnown RBP11.08□□□□□ -0.64
LINC01393-202ENST00000435981 FAM174AQ8TBP5 190 aa11.08□□□□□ -0.64
LINC01393-202ENST00000435981 ADH1CP00326 375 aa11.07□□□□□ -0.64
LINC01393-202ENST00000435981 C4orf48Q5BLP8 95 aa11.07□□□□□ -0.64
LINC01393-202ENST00000435981 CDK15Q96Q40 435 aa11.07□□□□□ -0.64
LINC01393-202ENST00000435981 LIMD1Q9UGP4 676 aa11.07□□□□□ -0.64
LINC01393-202ENST00000435981 UACAQ9BZF9 1416 aa11.07□□□□□ -0.64
LINC01393-202ENST00000435981 PURBQ96QR8 312 aaKnown RBP11.06□□□□□ -0.64
LINC01393-202ENST00000435981 RAPGEF6Q8TEU7 1601 aa11.06□□□□□ -0.64
LINC01393-202ENST00000435981 SCARF1Q14162 830 aa11.05□□□□□ -0.64
LINC01393-202ENST00000435981 QPCTQ16769 361 aa11.05□□□□□ -0.64
LINC01393-202ENST00000435981 NR3C2P08235 984 aa11.04□□□□□ -0.64
LINC01393-202ENST00000435981 ARID5BQ14865 1188 aa11.04□□□□□ -0.64
LINC01393-202ENST00000435981 MYSM1Q5VVJ2 828 aa11.04□□□□□ -0.64
LINC01393-202ENST00000435981 HECW1Q76N89 1606 aa11.04□□□□□ -0.64
LINC01393-202ENST00000435981 ABCC2Q92887 1545 aa11.04□□□□□ -0.64
LINC01393-202ENST00000435981 SOBPA7XYQ1 873 aa11.03□□□□□ -0.64
LINC01393-202ENST00000435981 PDE4DQ08499 809 aa11.03□□□□□ -0.64
LINC01393-202ENST00000435981 ZFAND3Q9H8U3 227 aa11.03□□□□□ -0.64
LINC01393-202ENST00000435981 PLB1Q6P1J6 1458 aa11.02□□□□□ -0.65
LINC01393-202ENST00000435981 ADCY10Q96PN6 1610 aa11.02□□□□□ -0.65
LINC01393-202ENST00000435981 UHRF1BP1LA0JNW5 1464 aa11.01□□□□□ -0.65
LINC01393-202ENST00000435981 LILRB3O75022 631 aa11.01□□□□□ -0.65
LINC01393-202ENST00000435981 ZIC2O95409 532 aaPredicted RBP11.01□□□□□ -0.65
LINC01393-202ENST00000435981 GRM5P41594 1212 aa11.01□□□□□ -0.65
LINC01393-202ENST00000435981 TSC1Q92574 1164 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms