RNA–Protein interactions for RNA: ENST00000435290.1

CX3CR1-204, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 4

Gene CX3CR1, Length 699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-204ENST00000435290 USP6P35125 1406 aa18.58■□□□□ 0.57
CX3CR1-204ENST00000435290 KAT6BQ8WYB5 2073 aa18.58■□□□□ 0.57
CX3CR1-204ENST00000435290 NLRP6P59044 892 aa18.58■□□□□ 0.56
CX3CR1-204ENST00000435290 CENPJQ9HC77 1338 aaPredicted RBP18.57■□□□□ 0.56
CX3CR1-204ENST00000435290 AATKQ6ZMQ8 1374 aa18.56■□□□□ 0.56
CX3CR1-204ENST00000435290 PLSCR1O15162 318 aa18.56■□□□□ 0.56
CX3CR1-204ENST00000435290 PTF1AQ7RTS3 328 aa18.56■□□□□ 0.56
CX3CR1-204ENST00000435290 BRD4O60885 1362 aaPredicted RBP18.55■□□□□ 0.56
CX3CR1-204ENST00000435290 BCL11BQ9C0K0 894 aaPredicted RBP18.55■□□□□ 0.56
CX3CR1-204ENST00000435290 PDGFDQ9GZP0 370 aaPredicted RBP18.54■□□□□ 0.56
CX3CR1-204ENST00000435290 CABP1Q9NZU7 370 aa18.54■□□□□ 0.56
CX3CR1-204ENST00000435290 TRPM1Q7Z4N2 1603 aa18.53■□□□□ 0.56
CX3CR1-204ENST00000435290 ZBTB7AO95365 584 aa18.53■□□□□ 0.56
CX3CR1-204ENST00000435290 WDR17Q8IZU2 1322 aa18.52■□□□□ 0.56
CX3CR1-204ENST00000435290 CPSF1Q10570 1443 aaKnown RBP18.52■□□□□ 0.56
CX3CR1-204ENST00000435290 NHSQ6T4R5 1651 aa18.51■□□□□ 0.55
CX3CR1-204ENST00000435290 SOX12O15370 315 aa18.51■□□□□ 0.55
CX3CR1-204ENST00000435290 MARCH10Q8NA82 808 aaPredicted RBP18.51■□□□□ 0.55
CX3CR1-204ENST00000435290 AXIN2Q9Y2T1 843 aa18.51■□□□□ 0.55
CX3CR1-204ENST00000435290 LTN1O94822 1766 aa18.5■□□□□ 0.55
CX3CR1-204ENST00000435290 CSB-PGBD3P0DP91 1061 aa18.5■□□□□ 0.55
CX3CR1-204ENST00000435290 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
CX3CR1-204ENST00000435290 PROM2Q8N271 834 aa18.49■□□□□ 0.55
CX3CR1-204ENST00000435290 BTAF1O14981 1849 aa18.49■□□□□ 0.55
CX3CR1-204ENST00000435290 CDCA7Q9BWT1 371 aaPredicted RBP18.48■□□□□ 0.55
CX3CR1-204ENST00000435290 STK32BQ9NY57 414 aa18.48■□□□□ 0.55
CX3CR1-204ENST00000435290 MON2Q7Z3U7 1717 aa18.48■□□□□ 0.55
CX3CR1-204ENST00000435290 UTRNP46939 3433 aa18.47■□□□□ 0.55
CX3CR1-204ENST00000435290 TXNRD1Q16881 649 aa18.47■□□□□ 0.55
CX3CR1-204ENST00000435290 BCL9O00512 1426 aa18.47■□□□□ 0.55
CX3CR1-204ENST00000435290 PTGER2P43116 358 aa18.46■□□□□ 0.55
CX3CR1-204ENST00000435290 NFAT5O94916 1531 aa18.45■□□□□ 0.54
CX3CR1-204ENST00000435290 ARHGEF25Q86VW2 580 aa18.45■□□□□ 0.54
CX3CR1-204ENST00000435290 TNS2Q63HR2 1409 aa18.45■□□□□ 0.54
CX3CR1-204ENST00000435290 EVC2Q86UK5 1308 aa18.45■□□□□ 0.54
CX3CR1-204ENST00000435290 EXOC5O00471 708 aa18.44■□□□□ 0.54
CX3CR1-204ENST00000435290 SLC15A2Q16348 729 aa18.44■□□□□ 0.54
CX3CR1-204ENST00000435290 KCNH5Q8NCM2 988 aa18.44■□□□□ 0.54
CX3CR1-204ENST00000435290 CARD10Q9BWT7 1032 aa18.44■□□□□ 0.54
CX3CR1-204ENST00000435290 FHDC1Q9C0D6 1143 aaPredicted RBP18.44■□□□□ 0.54
CX3CR1-204ENST00000435290 TTC21BQ7Z4L5 1316 aa18.44■□□□□ 0.54
CX3CR1-204ENST00000435290 PAPPAQ13219 1627 aa18.43■□□□□ 0.54
CX3CR1-204ENST00000435290 ZNF784Q8NCA9 323 aaPredicted RBP18.42■□□□□ 0.54
CX3CR1-204ENST00000435290 SYT17Q9BSW7 474 aa18.42■□□□□ 0.54
CX3CR1-204ENST00000435290 ABCC6O95255 1503 aa18.42■□□□□ 0.54
CX3CR1-204ENST00000435290 CCDC7Q96M83 1385 aa18.42■□□□□ 0.54
CX3CR1-204ENST00000435290 ACSBG1Q96GR2 724 aa18.41■□□□□ 0.54
CX3CR1-204ENST00000435290 USP54Q70EL1 1684 aa18.41■□□□□ 0.54
CX3CR1-204ENST00000435290 TUBGCP6Q96RT7 1819 aa18.4■□□□□ 0.54
CX3CR1-204ENST00000435290 ZNF692Q9BU19 519 aaPredicted RBP18.4■□□□□ 0.54
CX3CR1-204ENST00000435290 MTFR1LQ9H019 292 aa18.4■□□□□ 0.54
CX3CR1-204ENST00000435290 TTC21AQ8NDW8 1320 aa18.4■□□□□ 0.54
CX3CR1-204ENST00000435290 QSER1Q2KHR3 1735 aa18.39■□□□□ 0.53
CX3CR1-204ENST00000435290 KTN1Q86UP2 1357 aaKnown RBP18.39■□□□□ 0.53
CX3CR1-204ENST00000435290 ROCK2O75116 1388 aaKnown RBP18.36■□□□□ 0.53
CX3CR1-204ENST00000435290 L3MBTL2Q969R5 705 aa18.35■□□□□ 0.53
CX3CR1-204ENST00000435290 ARXQ96QS3 562 aa18.35■□□□□ 0.53
CX3CR1-204ENST00000435290 SGIP1Q9BQI5 828 aa18.35■□□□□ 0.53
CX3CR1-204ENST00000435290 SENP3-EIF4A1A0A087X0R7 540 aa18.34■□□□□ 0.53
CX3CR1-204ENST00000435290 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.34■□□□□ 0.53
CX3CR1-204ENST00000435290 NLRP2Q9NX02 1062 aa18.34■□□□□ 0.53
CX3CR1-204ENST00000435290 DOT1LQ8TEK3 1739 aa18.34■□□□□ 0.53
CX3CR1-204ENST00000435290 FAM208AQ9UK61 1670 aaKnown RBP18.34■□□□□ 0.53
CX3CR1-204ENST00000435290 RGPD2P0DJD1 1756 aa18.33■□□□□ 0.53
CX3CR1-204ENST00000435290 ERBB3P21860 1342 aa18.33■□□□□ 0.53
CX3CR1-204ENST00000435290 KLHL34Q8N239 644 aa18.33■□□□□ 0.52
CX3CR1-204ENST00000435290 COL24A1Q17RW2 1714 aa18.32■□□□□ 0.52
CX3CR1-204ENST00000435290 IL2RBP14784 551 aa18.32■□□□□ 0.52
CX3CR1-204ENST00000435290 ZNF827Q17R98 1081 aa18.31■□□□□ 0.52
CX3CR1-204ENST00000435290 LY75O60449 1722 aa18.3■□□□□ 0.52
CX3CR1-204ENST00000435290 GPR162Q16538 588 aa18.29■□□□□ 0.52
CX3CR1-204ENST00000435290 NME9Q86XW9 330 aa18.29■□□□□ 0.52
CX3CR1-204ENST00000435290 SHANK3Q9BYB0 1731 aa18.29■□□□□ 0.52
CX3CR1-204ENST00000435290 MAP3K5Q99683 1374 aa18.29■□□□□ 0.52
CX3CR1-204ENST00000435290 C1QTNF8P60827 252 aa18.28■□□□□ 0.52
CX3CR1-204ENST00000435290 PELP1Q8IZL8 1130 aaKnown RBP18.28■□□□□ 0.52
CX3CR1-204ENST00000435290 ANKRD24Q8TF21 1146 aa18.28■□□□□ 0.52
CX3CR1-204ENST00000435290 LRRC4BQ9NT99 713 aa18.28■□□□□ 0.52
CX3CR1-204ENST00000435290 USP31Q70CQ4 1352 aa18.28■□□□□ 0.52
CX3CR1-204ENST00000435290 SIN3AQ96ST3 1273 aa18.27■□□□□ 0.52
CX3CR1-204ENST00000435290 CD163L1Q9NR16 1453 aa18.26■□□□□ 0.51
CX3CR1-204ENST00000435290 NEUROD1Q13562 356 aa18.25■□□□□ 0.51
CX3CR1-204ENST00000435290 TMC1Q8TDI8 760 aa18.25■□□□□ 0.51
CX3CR1-204ENST00000435290 SBNO2Q9Y2G9 1366 aa18.25■□□□□ 0.51
CX3CR1-204ENST00000435290 GOLGB1Q14789 3259 aaKnown RBP18.25■□□□□ 0.51
CX3CR1-204ENST00000435290 POLD1P28340 1107 aa18.24■□□□□ 0.51
CX3CR1-204ENST00000435290 DDX54Q8TDD1 881 aaKnown RBP18.24■□□□□ 0.51
CX3CR1-204ENST00000435290 HDGFL2Q7Z4V5 671 aaPredicted RBP18.23■□□□□ 0.51
CX3CR1-204ENST00000435290 SYTL4Q96C24 671 aaPredicted RBP18.23■□□□□ 0.51
CX3CR1-204ENST00000435290 KCNQ4P56696 695 aa18.22■□□□□ 0.51
CX3CR1-204ENST00000435290 AKT1S1Q96B36 256 aa18.22■□□□□ 0.51
CX3CR1-204ENST00000435290 LTV1Q96GA3 475 aaPredicted RBP18.22■□□□□ 0.51
CX3CR1-204ENST00000435290 EDC4Q6P2E9 1401 aaKnown RBP18.22■□□□□ 0.51
CX3CR1-204ENST00000435290 PNPLA7Q6ZV29 1317 aa18.22■□□□□ 0.51
CX3CR1-204ENST00000435290 GIGYF1O75420 1035 aaPredicted RBP18.21■□□□□ 0.51
CX3CR1-204ENST00000435290 SLC27A3Q5K4L6 730 aa18.21■□□□□ 0.51
CX3CR1-204ENST00000435290 SLC16A10Q8TF71 515 aa18.21■□□□□ 0.51
CX3CR1-204ENST00000435290 TFCP2L1Q9NZI6 479 aa18.21■□□□□ 0.51
CX3CR1-204ENST00000435290 A0A1W2PP64 1363 aa18.19■□□□□ 0.5
CX3CR1-204ENST00000435290 C5P01031 1676 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms